• Title/Summary/Keyword: Mean-line Analysis

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QTL Mapping of Agronomic Traits in an Advanced Backcross Population from a Cross between Oryza sativa L. cv. Milyang 23 and O. glaberrima

  • Kang, Ju-Won;Suh, Jung-Pil;Kim, Dong-Min;Oh, Chang-Sik;Oh, Ji-Min;Ahn, Sang-Nag
    • Korean Journal of Breeding Science
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    • v.40 no.3
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    • pp.243-249
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    • 2008
  • In the previous study, 141 $BC_3F_2$ lines from a cross between the Oryza sativa cv. Milyang 23 and O. glaberrima were used to identify favorable wild QTL alleles for yield component traits. In this study, we carried out QTL analysis of four grain morphology as well as four yield component traits using 141 $BC_3F_5$ lines from the same cross and compared QTLs detected in two different generations. The mean number of O. glaberrima segments in the 141 $BC_3F_5$ lines ranged from 1 to 13 with 2.69 and 5.71 of the average means of homozygous and heterozygous segments, respectively. There was a three-fold difference in the number of QTLs detected for four traits commonly evaluated in two generations (seven QTLs in the $BC_3F_5$ vs 21 in the $BC_3F_2$ population). The percentages of the phenotypic variance explained by QTLs in the BC3F5 population were similar to or less than those in the $BC_3F_2$ population. This is probably due to the difference in the genetic composition of two populations and the environmental effects. The locations of the QTLs commonly detected in both generations were in good agreement except for one QTL for spikelets per panicle. The yield QTL, yd3 was colocalized with the spikelets per panicle, spp3. Yield increase at this locus is due to the increase in spikelets per panicle, because both traits were associated with increase in spikelets per panicle and yield due to the presence of an O. glaberrima allele. Clusters of QTLs for grain morphology traits were observed in two chromosome regions. One cluster harboring five QTLs near SSR markers RM106 and RM263 was detected on chromosome 2. This population would serve as a foundation for development of the introgression line population from a cross between Milyang 23 and O. glaberrima.

Numerical Simulation of Cone Penetration Tests in Sand Ground Using Critical State Mohr Coulomb Plasticity Model (한계상태 Mohr Coulomb 소성 모델을 활용한 콘관입시험의 수치적 모사)

  • Woo, Sang Inn;Chung, Choong-Ki
    • Journal of the Korean Geotechnical Society
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    • v.35 no.2
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    • pp.37-51
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    • 2019
  • This study focuses on the numerical simulations of the cone penetration tests in a sand ground. The mechanical responses of sand were described using the modified Mohr Coulomb plasticity model based on the critical state soil mechanics. In the plasticity model, the dilatancy angle was not a constant, but a function of the distance to the critical state line from the current state of void ratio and mean effective stress. To simulate cone penetration tests numerically, this study relied on Lagrangian finite element method under the axisymmetric condition. To enable penetration of the cone penetrometer without tearing elements along the symmetric axis, the penetration guide concept was adopted in this study. The results of numerical simulations on the calibration chamber cone penetration tests had good agreement with the experimental results.

TRAO KSP TIMES: Homogeneous, High-sensitivity, Multi-transition Spectral Maps toward the Orion A and Ophiuchus Cloud with a High-velocity Resolution.

  • Yun, Hyeong-Sik;Lee, Jeong-Eun;Choi, Yunhee;Evans, Neal J. II;Offner, Stella S.R.;Heyer, Mark H.;Lee, Yong-Hee;Baek, Giseon;Choi, Minho;Kang, Hyunwoo;Cho, Jungyeon;Lee, Seokho;Tatematsu, Ken'ichi;Gaches, Brandt A.L.;Yang, Yao-Lun;Chen, How-Huan;Lee, Youngung;Jung, Jae Hoon;Lee, Changhoon
    • The Bulletin of The Korean Astronomical Society
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    • v.44 no.2
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    • pp.68.1-68.1
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    • 2019
  • Turbulence plays a crucial role in controlling star formation as it produces density fluctuation as well as non-thermal pressure against gravity. Therefore, turbulence controls the mode and tempo of star formation. However, despite a plenty of previous studies, the properties of turbulence remain poorly understood. As part of the Taeduk Radio Astronomy Observatory (TRAO) Key Science Program (KSP), "mapping Turbulent properties In star-forming MolEcular clouds down to the Sonic scale (TIMES; PI: Jeong-Eun Lee)", we mapped the Orion A and the Ophiuchus clouds, in three sets of lines (13CO 1-0/C18O 1-0, HCN 1-0/HCO+ 1-0, and CS 2-1/N2H+ 1-0) with a high-velocity resolution (~0.1 km/s) using the TRAO 14-m telescope. The mean Trms for the observed maps are less than 0.25 K, and all these maps show uniform Trms values throughout the observed area. These homogeneous and high signal-to-noise ratio data provide the best chance to probe the nature of turbulence in two different star-forming clouds, the Orion A and Ophiuchus clouds. We present comparisons between the line intensities of different molecular tracers as well as the results of a Principal Component Analysis (PCA).

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Pretherapy 18F-FDG PET/CT in Predicting Disease Relapse in Patients With Immunoglobulin G4-Related Disease: A Prospective Study

  • Mei-Fang Cheng;Yue Leon Guo;Ruoh-Fang Yen;Yen-Wen Wu;Hsiu-Po Wang
    • Korean Journal of Radiology
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    • v.24 no.6
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    • pp.590-598
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    • 2023
  • Objective: To investigate whether the levels of inflammation detected by 18F-fluorodeoxyglucose (FDG) positron emission tomography (PET)/computed tomography (CT) can predict disease relapse in immunoglobulin G4-related disease (IgG4-RD) patients receiving standard induction steroid therapy. Materials and Methods: This prospective study analyzed pretherapy FDG PET/CT images from 48 patients (mean age, 63 ± 12.9 years; 45 males and 3 females) diagnosed with IgG4-RD between September 2008 and February 2018, who subsequently received standard induction steroid therapy as the first-line treatment. Multivariable Cox proportional hazards models were used to identify the potential prognostic factors associated with relapse-free survival (RFS). Results: The median follow-up time for the entire cohort was 1913 days (interquartile range [IQR], 803-2929 days). Relapse occurred in 81.3% (39/48) patients during the follow-up period. The median time to relapse was 210 days (IQR, 140-308 days) after completion of standardized induction steroid therapy. Among the 17 parameters analyzed, Cox proportional hazard analysis identified whole-body total lesion glycolysis (WTLG) > 600 on FDG-PET as an independent risk factor for disease relapse (median RFS, 175 vs. 308 days; adjusted hazard ratio, 2.196 [95% confidence interval: 1.080-4.374]; P = 0.030). Conclusion: WTLG on pretherapy FDG PET/CT was the only significant factor associated with RFS in IgG-RD patients receiving standard steroid induction therapy.

Robust Radiometric and Geometric Correction Methods for Drone-Based Hyperspectral Imaging in Agricultural Applications

  • Hyoung-Sub Shin;Seung-Hwan Go;Jong-Hwa Park
    • Korean Journal of Remote Sensing
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    • v.40 no.3
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    • pp.257-268
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    • 2024
  • Drone-mounted hyperspectral sensors (DHSs) have revolutionized remote sensing in agriculture by offering a cost-effective and flexible platform for high-resolution spectral data acquisition. Their ability to capture data at low altitudes minimizes atmospheric interference, enhancing their utility in agricultural monitoring and management. This study focused on addressing the challenges of radiometric and geometric distortions in preprocessing drone-acquired hyperspectral data. Radiometric correction, using the empirical line method (ELM) and spectral reference panels, effectively removed sensor noise and variations in solar irradiance, resulting in accurate surface reflectance values. Notably, the ELM correction improved reflectance for measured reference panels by 5-55%, resulting in a more uniform spectral profile across wavelengths, further validated by high correlations (0.97-0.99), despite minor deviations observed at specific wavelengths for some reflectors. Geometric correction, utilizing a rubber sheet transformation with ground control points, successfully rectified distortions caused by sensor orientation and flight path variations, ensuring accurate spatial representation within the image. The effectiveness of geometric correction was assessed using root mean square error(RMSE) analysis, revealing minimal errors in both east-west(0.00 to 0.081 m) and north-south directions(0.00 to 0.076 m).The overall position RMSE of 0.031 meters across 100 points demonstrates high geometric accuracy, exceeding industry standards. Additionally, image mosaicking was performed to create a comprehensive representation of the study area. These results demonstrate the effectiveness of the applied preprocessing techniques and highlight the potential of DHSs for precise crop health monitoring and management in smart agriculture. However, further research is needed to address challenges related to data dimensionality, sensor calibration, and reference data availability, as well as exploring alternative correction methods and evaluating their performance in diverse environmental conditions to enhance the robustness and applicability of hyperspectral data processing in agriculture.

Effect of various types of dental magnetostrictive ultrasonic scaler tip on surface characteristics of titanium (여러가지 치과용 자기변형 초음파 스케일러 팁이 티타늄 표면특성에 미치는 영향)

  • Min-Cheol Yang;Seok-Hwan Jeong;Seol Kim;Seung-Hwan Seol;Seung-Kyu Lee;Sang-Joun Yu;Byung-Ock Kim
    • Journal of Surface Science and Engineering
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    • v.57 no.4
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    • pp.296-305
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    • 2024
  • The aim of this in vitro study was to evaluate the changes in the roughness and weight of titanium discs treated with 3 different types of magnetostrictive ultrasonic scaler tip. Eighty identical disks (10 mm in diameter), 50 for surface roughness and 30 for weight change, were investigated in this study. For this study, 3 types of scaler tip were used as follows; Powerline(FSI-PWR-1000), Slimline(FSI-SLI-1000), and Thinsert(-16 00037374). The power was set to high power(HP), medium power(MP), and low power(LP), in the blue zone recommended by the manufacturer. Surface topography analysis was carried out using scanning electron microscopy (SEM). Surface roughness measurements, the average surface roughness (Ra) and mean roughness profile depth (Rz), were compared between treated and non-treated surfaces with a profilometer. A PowerLINE-MP of magnetostrictive ultrasonic scalers for implant patients might be recommended when considering changes in the roughness and weight of titanium discs.

Development of Headforms for the Labor Population in Selection, Use and Maintenance of Respirators in Korea (호흡보호구의 선정, 사용 및 관리를 위한 한국형 노동인구의 인두 개발)

  • Jung-Keun Park;Se-Dong Kim;Eun-Ji Lee
    • Journal of Korean Society of Occupational and Environmental Hygiene
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    • v.34 no.3
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    • pp.279-291
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    • 2024
  • Objective: This was to develop headforms for the labor population, based on a three-dimensional(3D) face dimensions data base(DB) and a principal component analysis(PCA) fit test panel, in selection, use and maintenance of respirators in Korea. Methods: This study was part of a two-year-project initiated in 2021. The study was designed and conducted in line with ISO 16976-2 while subjects were those employed in the development of the PCA fit test panel. The approaches included literature review; examination on conformity of the 3D face dimensions DB; and development of headforms representing the labor population. The mean data were used in order to construct each model of the headforms through a way of 3D modeling and 3D printing technology. Results: A total of 2,752 subjects were determined. Five models of headforms(small, medium, large, long-narrow, short-wide) were completely constructed for the labor population. For example, means of the 10 face dimensions for medium headform model were: minimum frontal breadth 106 mm, face width 136 mm, jaw width 127 mm, face length 111 mm, interpupillary distance 69 mm, head breadth 164 mm, nose protrusion 12 mm, nose breadth 34 mm, nasal root breadth 35 mm, and nose length 50 mm. Conclusions: Five models of headforms were newly constructed using the study data. It is likely desirable that the constructed headforms, together with the 3D face dimensions DB as well as the PCA fit test panel, can be utilized more effectively in selection, use and maintenance of respirators for users including the labor population.

A Study of PM levels in Subway Passenger Cabins in Seoul Metropolitan area (서울시 지하철 객차내에서의 미세먼지 농도 평가)

  • Roh, Young-Man;Park, Wha Me;Lee, Choel Min;Kim, Yoon Shin;Park, Dong Sun;Kim, Suck Won
    • Journal of Korean Society of Occupational and Environmental Hygiene
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    • v.17 no.1
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    • pp.13-20
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    • 2007
  • This study was performed to investigate the concentrations of PM($PM_{10}$, $PM_{2.5}$, $PM_{1}$) and it's affecting factors in the subway from line 1 to line 8 in Seoul metropolitan area, from Sep. 1 to 30, 2005. PM concentrations were measured at the entrances and centers in subway passenger cabins by a light scattering equipment. And the affecting factors to PM were estimated based on the number of passenger, door open and close and running area etc. The geometric means of $PM_{10}$, $PM_{2.5}$ and $PM_{1}$ concentration in Seoul subway passenger cabins were $214{\mu}g/m^3$, $86.6{\mu}g/m^3$ and $27.0{\mu}g/m^3$, respectively. These mean concentrations in subway carriage were higher when it ran on an underground track than on a ground track. And running time(7AM-9AM, 11AM-13PM, 6PM-8PM) significantly influenced to the concentrations of $PM_{10}$, $PM_{2.5}$ and $PM_{1}$. Daily profile of $PM_{10}$ and $PM_{2.5}$, $PM_{1}$ expressed as an 10 minutes average, showed similar variation pattern over day period. In correlation analysis, significant relations among $PM_{10}$, $PM_{2.5}$ and $PM_{1}$ were detected(p〈0.01). In particular, correlation coefficient between $PM_{10}$and $PM_{1}$ was highly significant(r=0.94). Further study is needed to identity the sources of PM in subway cabins and to compare pollutants concentration among subway lines.

Evaluation of Characteristics of Particle Composition and Pollution of Heavy Metals for Tidal Flat Sediments in Julpo Bay, Korea (줄포만 갯벌의 입도특성 및 중금속 오염도 평가)

  • Kim, Jong-Gu;You, Sun-Jae;Ahn, Wook-Sung
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.14 no.4
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    • pp.247-256
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    • 2008
  • For the systematic scientific management of tidal flat sediment in Julpo bay of Korea, this study conducted a survey of particle composition, organic matter(l.L) and heavy metals for three lines ; including F, R and L lines in tidal flat sediment. Particle composition of tidal flat sediments consisted predominantly of clay at F line which was in right angle direction to the coast, whereas R and L lines were located horizontally along the coast and consisted predominantly of silt. Mean grain size values of tidal flat sediments were in the range of 3.7 ${\phi}{\sim}$10.4 ${\phi}$(average 7${\phi}$). The contents of heavy metals observed at R and L lines were lower than those at F line. The correlation analysis among heavy metals, organic matter and particle size was found to have a good interrelationship. For the evaluation of heavy metals pollution, two criteria of US NOAA and KEI(in Korea) were applied Heavy metals pollution level of tidal flat sediments belonged in Non polluted and Moderately polluted groups in US EPA criteria, and its pollution levels sat below ERL in NOAA criteria. The results of heavy metals pollution level obtained by KEI criteria were found to be less than the goal level.

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Studies on the Selection Response of Generation for Egg Production in Single Comb Leghorn (백색 레그혼종 순종계통의 산란능력에 있어서 세대별 선발반응에 관한 연구)

  • 이학교;최철환;박무균;이수헌;박태진
    • Korean Journal of Poultry Science
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    • v.19 no.4
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    • pp.187-195
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    • 1992
  • This study carried out to investigate selection response of pure line population of layer chicken. Data for two layer pure line of Single Comb White Leghorn were collected from 1986 to 1991. Primary selection criteria were egg number to 270 days of age (EN270), egg weight(BW270), body weight (BW270) at 270 days of age and the days of the 1st egg(SM). The results obtained in this study are summarized as follows ; 1. Mean phenotypic values of two strains were decreased by 1.94 day(K), 1.320ay(F) for SM and increased by 0.09g(K), -0.05g(F) for EW 270 and 0.56(K), -0.78(F) for EN270. 2. The ratio of a realized selection differential to expected selection differentials for SM (sexual maturity), EW 270, and BW 270 were not significantly decreased during 5 generations. 3. Heritability were estimated from sib analysis. The means of estimates were 0.28(F), 0.39(K) for BW270, and 0.25(F), 0.29(K) for EN270 and 0.51(F), 0.48(K) for EW270. 4. The genetic gains were estimated by method of selection index in retrospect on the basis of selection differentials. EN270 and EW270 were found to increase by 2.01(F), 2.25(K) and 0.54 (F), 0.65(K) per generation.

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