This study tested the feasibility of observing H/D exchange of intact protein by top-down electron capture dissociation (ECD) mass spectrometry for the investigation of protein structure. Ubiquitin is selected as a model system. Local structural information was obtained from the deuteration levels of c and $z^{\cdot}$ ions generated from ECD. Our results showed that ${\alpha}$-helix region has the lowest deuteration level and the C-terminal fraction containing a highly mobile tail has the highest deuteration level, which correlates well with previous X-Ray and HDX/NMR analyses. We studied site-specific H/D exchange kinetics by monitoring H/D exchange rate of several structural motives of ubiquitin. Two hydrogen bonded ${\beta}$-strands showed similar HDX rates. However, the outer ${\beta}$-strand always has higher deuteration level than the inner ${\beta}$-strand. The HDX rate of the turn structure (residues 8-11) is lower than that of ${\beta}$-strands (residues 1-7 and residues 12-17) it connects. Although isotopic distribution gets broader after H/D exchange which results in a limited number of backbone cleavage sites detected, our results demonstrate that this method can provide valuable detailed structural information of proteins. This approach should also be suitable for the structural investigation of other unknown proteins, protein conformational changes, as well as protein-protein interactions and dynamics.
Cha, Ji Hyun;Woo, Young Min;Jo, Eun Sol;Cha, Jae Young;Lee, Sang Hyeon;Lee, Keun Woo;Kim, Andre
Journal of Life Science
/
v.32
no.3
/
pp.232-240
/
2022
Various methods are known for preparing liposomes, the simplest being the Bangham method which has been widely used. Although it is possible to produce liposomes effectively on a small experimental level with this approach, large-scale production cannot be easily performed due to difficulties in removing the organic solvent and the size of the reactor required to form the lipid film. On the other hand, emulsion can mass produce tons of liposomes with uniform particles but has the disadvantage of a significantly low capture rate. This study therefore developed an optimal liposome processing method using heat with improved capture rate and stability, and bio-absorption experiments were performed by oral administration to SD rat alongside capture rate, particle size, and zeta potential. Through the heating method, a small and uniform liposome of about 214 nm was formed and the capture rate was 38.67%, confirming that the liposome prepared by heating has a higher capture rate than the 26.46% achieved through emulsion. Comparing blood concentrations, it showed a 1.5 to 2 fold increase in all groups, gradually decreasing until 4-12 hr. The highest blood concentration of ascorbic acid powder was about 12.017 ㎍/ml, the emulsion liposome 13.871 ㎍/ml, and the heating liposome 16.322 ㎍/ml, thereby showing an improved absorption rate.
kim, Choon Sung;Roh, Jae Hoon;Bae, Mun Joo;Kim, Chi Nyon;Lim, Nam Gu;Won, Jong Uk
Journal of Korean Society of Occupational and Environmental Hygiene
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v.7
no.1
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pp.49-59
/
1997
This study was performed to analyze the purity of technical grade ${\alpha}$-naphthylamine, to establish optimal analytical condition of ${\alpha}$-naphthylamine in urine and to determine the urine sample of workers exposed to ${\alpha}$-naphthylamine. The purity of technical grade ${\alpha}$-naphthylamine were $96.5{\pm}2.38%$, $94.1{\pm}0.97%$, $97.0{\pm}0.02%$ by gas chromatography-mass selective detector. To analyze ${\alpha}$-naphthylamine in urine, high performance liquid chromatography-electrochemical detector and gas chromatography-electron capture detector operating conditions have been optimized by preliminary expriment. In high performance liquid chromatography-electrochemical detector, the mobile phase was consisted of acetonitrile(35%) and water(65%), and the flow rate was maintained at 1.0ml per minute. Optimal detective condition was 9.0V(10nA/V) of electrochemical detector. The recovery of sep-pak treatment method was highly estimated as pretreatment of ${\alpha}$-naphthylamine in urine. The free amine was isolated by gas chromatography-electron capture detector after basic hydrosis, sep-pak treatment, toluene elution and HFBA(heptafluoro-butyric anhydride) derivatization of urine. The recovery of ${\alpha}$-naphthylamine in urine was $98.73{\pm}3.29%$ by gas chromatography-electron capture detector. The sensitivity was more higher than that of high performance liquid chromatography-electrochemical detector. Urinary ${\alpha}$-naphthylamine was detected in only one worker among nine workers. The level of ${\alpha}$-naphthylamine in urine was 6.42 ng/ml.
The characteristics of an impact load and pressure were experimentally investigated. Drop tests were carried out using a modified Wigley with CB = 0.56. The vertical force, pressures, and vertical accelerations were measured. A 6-component load cell was used to measure the forces, piezo-electric sensors were used to capture the impact pressure, and strain-gauge type accelerometers were used to measure the vertical accelerations. A 50-kHz sampling rate was applied to capture the peak values. The repeatability of the measured data was confirmed and the basic characteristics of the impact load and pressure such as the linearity to the falling height were observed for all of the measurements. A simple formula was derived to extract the physical impact load from the measured force based on a simple mass-sensor-mass diagram, which was validated by comparing impact forces with existing data using the mathematical model of Faltinsen and Chezhian (2005). The effects of the elasticity of the model and change in acceleration during the water entry were investigated. It is interesting to observe that the impact loads occurred and reached peak values at the same time duration after water entry for all drop heights.
Lee, Yang Ji;Yang, Inyoung;Lee, Kyung Jae;Oh, Jung Hwan;Choi, Jin
Journal of the Korean Society of Propulsion Engineers
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v.26
no.4
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pp.10-20
/
2022
The performance analysis test of the scramjet engine intake was conducted under the Mach 5 condition of the scramjet engine test facility, a free-jet ground test facility of the Korea Aerospace Research Institute. A pitot/static pressure rake installed at the rear of the isolator was designed and manufactured to measure the total pressure recovery rate and mass capture ratio, which are typical performance factors of the scramjet engine intake. The effect of the rake mounted at the rear of the isolator on the intake, the performance analysis measured by the rake, and the change in wall static pressure distribution according to the angle of attack were performed. Finally, the point at which the intake unstart occurred was confirmed by using the rear back pressure adjusting device, which simulates pressure rise in the combustor, and the results are summarized in this paper.
Tejaswini Vaidya;John P. Stanford;Nicolene van Rooyen;Krishnan Raja;Vivek Utgikar;Piyush Sabharwall
Journal of Nuclear Fuel Cycle and Waste Technology(JNFCWT)
/
v.21
no.2
/
pp.205-224
/
2023
The emission of off-gas streams from used fuel recycling is a concern in nuclear energy usage as they contain radioactive compounds, such as, 3H, 14C, 85Kr, 131I, and 129I that can be harmful to human health and environment. Radioactive iodine, 129I, is particularly troublesome as it has a half-life of more than 15 million years and is prone to accumulate in human thyroid glands. Organic iodides are hazardous even at very low concentrations, and hence the capture of 129I is extremely important. Dynamic adsorption experiments were conducted to determine the efficiency of sodium mordenite, partially exchanged silver mordenite, and fully exchanged silver mordenite for the removal of methyl iodide present at parts per billion concentrations in a simulated off-gas stream. Kinetic analysis of the system was conducted incorporating the effects of diffusion and mass transfer. The possible reaction mechanism is postulated and the order of the reaction and the values of the rate constants were determined from the experimental data. Adsorbent characterization is performed to investigate the nature of the adsorbent before and after iodine loading. This paper will offer a comprehensive understanding of the methyl iodide behavior when in contact with the mordenites.
Shuai Wang;Jeong Hyeon Hong;Jong Kyun You;Yeon Ki Hong
Korean Chemical Engineering Research
/
v.61
no.4
/
pp.555-560
/
2023
Conventional aqueous amine-based CO2 capture has a problem in that a large amount of renewable energy is required for CO2 stripping and solvent regeneration in its industrial applications. This work proposes a water-lean absorbent that can reduce regeneration energy by lowering the water content in the absorbent with high absorption capacity for CO2. To this purpose, this water-lean solvent introduced NMP (N-methyl-2-pyrrolidone), which has a higher physical solubility in CO2 and a low specific heat capacity comparing to water, along with 3-methylaminopropylamine (MAPA), a diamine, into the absorbent. The circulating absorption capacity and absorption rate for CO2 of this water-lean solvent were measured using a packed tower. When NMP was added to the absorbent, the absorption rate was improved. In the case of the absorbent containing 2.5M MAPA was used, the maximum circulating absorption capacity was obtained when 10 wt% of NMP was included in absorbent. The overall mass transfer coefficient increased as the concentration of NMP increased. However, at loading values higher than 0.5, the increment in mass transfer coefficient decreased as the concentration of NMP increased. When the lean loading value is low, the mass transfer resistance due to viscosity of the absorbent is low, so the overall mass transfer coefficient increases with the addition of NMP. However, as the lean loading value increases, the viscosity of the absorbent increases, and the diffusivity of CO2 and MAPA decreases, resulting in sharply decreasing of the overall mass transfer coefficient.
Ahn, Hae Young;Park, Cheol Woo;Park, Hee Mun;Song, Ji Hyeon
International Journal of Highway Engineering
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v.17
no.2
/
pp.99-105
/
2015
PURPOSES: In this study, alkali-activated blast-furnace slag (AABFS) was investigated to determine its capacity to absorb carbon dioxide and to demonstrate the feasibility of its use as an alternative to ordinary Portland cement (OPC). In addition, this study was performed to evaluate the influence of the alkali-activator concentration on the absorption capacity and physicochemical characteristics. METHODS: To determine the characteristics of the AABFS as a function of the activator concentration, blast-furnace slag was activated by using calcium hydroxide at mass ratios ranging from 6 to 24%. The AABFS pastes were used to evaluate the carbon dioxide absorption capacity and rate, while the OPC paste was tested under the same conditions for comparison. The changes in the surface morphology and chemical composition before and after the carbon dioxide absorption were analyzed by using SEM and XRF. RESULTS: At an activator concentration of 24%, the AABFS absorbed approximately 42g of carbon dioxide per mass of paste. Meanwhile, the amount of carbon dioxide absorbed onto the OPC was minimal at the same activator concentration, indicating that the AABFS actively absorbed carbon dioxide as a result of the carbonation reaction on its surface. However, the carbon dioxide absorption capacity and rate decreased as the activator concentration increased, because a high concentration of the activator promoted a hydration reaction and formed a dense internal structure, which was confirmed by SEM analysis. The results of the XRF analyses showed that the CaO ratio increased after the carbon dioxide absorption. CONCLUSIONS : The experimental results confirmed that the AABFS was capable of absorbing large amounts of carbon dioxide, suggesting that it can be used as a dry absorbent for carbon capture and sequestration and as a feasible alternative to OPC. In the formation of AABFS, the activator concentration affected the hydration reaction and changed the surface and internal structure, resulting in changes to the carbon dioxide absorption capacity and rate. Accordingly, the activator ratio should be carefully selected to enhance not only the carbon capture capacity but also the physicochemical characteristics of the geopolymer.
A hydrodynamic separator using natural free energy provided by bridge was operated for the treatment of stormwater runoff. The separator was automatically controlled by using electronic valve which is connected with pressure meter. Normally the separator was opened during dry days, but it was closed after the capture of first flush. The results indicated that the average pressure and the flow rate were directly affected by the rainfall intensity. The pressure was more than 3 meters as the rainfall intensity was above 5 mm/hr. The percent volume of underflow decreased as the pressure and flow rate increased, but the percent volume of overflow showed an opposite behavior. The concentration of total suspended solids (TSS) in underflow increased as a function of increasing pressure while it decreased in overflow. The TSS separation efficiency was evaluated based on mass balance. It ranged from 30% to 90% with the pressure ranging from 2 to 10 meters, and it was proportional to pressure and flow rate. The analysis of water balance indicated that around 13% of total runoff was captured by the separator as a first flush, and this runoff was separated as underflow and overflow with the respective percent volume of 29% and 71%. The pollutants budget was also examined based on mass balance. The results showed that the percent of TSS, $COD_{cr}$, TN and TP in underflow were 73%, 59%, 7.6% and 49%, respectively.
The calcination reactivity of limestone and physical property changes of calcined lime were investigated with a temperature($720~1000^{\circ}C$ under atmospheric gas($N_2$, $CO_2$) conditions. The mechanisms of mass transport in a lime matrix were represented by the evaporation and condensation (${\gamma}=1.7$) at $1000^{\circ}C$ and the volume diffusion (${\gamma}=2.7$) at $800^{\circ}C$, which was obtained by the specific surface area of calcined lime with sintering conditions. Also, the effect of physical property on the reactivity of sulfation reaction was determined by the changes of pore size with $lime-SO_2$ reaction in this work. The initial sulfation rate of calcined lime increased with increasing temperature, whereas the capture capacity of $SO_2$ exhibited a maximum value at $900^{\circ}C$. The pore volume of sulfated lime was decreased with increasing sulfation time, but the major pores shifted to the distribution of larger size at a temperature of $850{\;}~{\;}1000^{\circ}C$. The mean pore size of sulfated lime based on pore volume decreased gradually at $1000^{\circ}C$; however, it increased with sulfation time up to 40 min and rapidly decreased thereafter.
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