• Journal of the Korean Society of Marine Environment & Safety
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• v.27 no.7
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• pp.943-953
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• 2021

The purpose of this study is to investigate sediment recovery after the relocation of fish cage farms, by examining the changes in sediments and the benthic polychaete community. A preliminary survey was carried out in October 2017, before the relocation of the farms, and monthly surveys were conducted from November 2017 to October 2018 after the farms were moved. Subsequently, it was conducted every 2-3 months until October 2020. The survey was carried out at three stations (Farm1-3) at the location of the removed fish farms and at three control stations (Con1-3) without farms. The overall organic carbon content of the farm stations was higher than the control stations, but it gradually decreased after the farm was demolished, and there was no statistically significant difference about one year after the relocation of the farms (p<0.05). In the benthic polychaete community, abiotic community appeared at the farm stations in the summer, and consequently, the community transitioned to a low-diversity region with the predominant species Capitella capitata, which is an indicator of pollution. Until the abiotic period in the summer of the next year, the species diversity increased and the proportion of indicator species decreased, showing a tendency of recovering the benthic polychaete community, and these changes were repeated every year. In this study, the abiotic community appeared every year owing to the topographical characteristics, but as the survey progressed, the period of abiotic occurrence became shorter and the process of community recovery progressed expeditiously. Biological recovery of sediments after the relocation of the fish farms is still in progress, and it is imperative to study recovery trends through continuous monitoring.

• Journal of fish pathology
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• v.33 no.1
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• pp.35-43
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• 2020

Hypoxia is a serious problem in the marine ecosystem causing a decline in aquatic resources. MicroRNAs (miRNAs) regulate the expression of genes through binding to the corresponding sequences of their target mRNAs. Especially, miRNAs in the cytoplasm can be secreted into body fluids, which called circulating miRNAs, and the availability of circulating miRNAs as biomarkers for hypoxia has been demonstrated in mammals. However, there has been no report on the hypoxia-mediated changes in the circulating miRNAs in fish. miR-210 is known as the representative hypoxia-responsive circulating miRNA in mammals. To know whether fish miR-210 also respond to hypoxia, we analyzed the change of circulating miR-210 quantity in the serum of olive flounder (Paralichthys olivaceus) in response to hypoxia. The expression of hypoxia related genes, hypoxia inducible factor 1α (HIF-1α) and the heat shock protein 90α (HSP90α) was also analyzed. Similar to the reports from mammals, miR-210-5p and miR-210-3p were significantly increased in the serum of olive flounder in response to hypoxia, suggesting that circulating miR-210 levels in the serum can be used as a noninvasive prognostic biomarker for fish suffered hypoxia. The target genes of miR-210 were related to various biological processes, which explains the major regulatory role of miR-210 in response to hypoxia. The expression of HIF-1α and HSP90α in the tissues was also up-regulated by hypoxia. Considering the critical role of HIF-1α in miR-210 expression and HSP90 in miRNAs function, the present up-regulation of HIF-1α and HSP90α might be related to the increase of circulatory miR-210, and the interaction mechanism among HIF-1α, HSP90α, and hypoxia-responsive microRNAs in fish should be further studied.

• The Korean Journal of Malacology
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• v.32 no.1
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• pp.9-15
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• 2016

This study was conducted to find out biological response of the oyster Crassostrea gigas exposed to lead (Pb). Experimental period was four weeks. Experimental groups were composed of one control condition and three lead exposure conditions (0.20, 0.40 and 0.80 mg/L). The results of the study confirmed that lead induces reduction of survival rate and oxygen consumption rate and degeneration of organ structure of the bivalve. Oxygen consumption rate was observed exposure groups lower than control decline by 15%-55%. Histological analysis of organ system illustrated expansion of hemolymph sinus, degeneration of epithelial layer and connective tissue layer of the mantle. Also, epithelial degeneration and disappearance of cilia band are recognized in the gill filament and it was observed disruption of epithelial layer and degeneration of basophilic cell and epithelial cell in the digestive tubules.

• Korean Journal of Ichthyology
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• v.24 no.1
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• pp.1-10
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• 2012

Reciprocal hybrids between the mud loach ($Misgurnus$ $mizolepis$) and cyprinid loach ($M.$ $anguillicaudatus$) were produced by artificial fertilization. The chromosome number of mud loach was 2n=48, consisting of 12M+4SM+32A chromosomes. The cyprinid loach has 2n=50, consisting of 10M+4SM+36A chromosomes. The chromosome numbers of the diploid reciprocal hybrids were 2n=49, consisting of 11M+4SM+34A chromosomes. All the karyotypes documented in this study had the same arm number of 64. There was no evidence of chromosomal polymorphisms or sex-related heteromorphism. The cytogenetic traits of the hybrid genotypes were intermediate between those of the parent species. In all genotypes, the chromosomal NORs localized to the terminal short arms of the same metacentric chromosome pair. These results suggest that Robertsonian translocation occurred between metacentric chromosome 1 of mud loach and acrocentric chromosome of cyprinid loach.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.39 no.spc1
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• pp.189-197
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• 2006

To elucidate the organic matter sources in soft-bottom macrozoobenthos at Tongyeong, Korea, macrozoobenthos and their potential food sources were sampled in May 2004, and their C and N stable isotope compositions were analyzed. In total we collected 128 macrozoobenthic species, which ranged from 465 to 3,775 individuals/$m^2$(average 2,108 ind.$m^2$) in density and from 47.8 to 539.9 gwwt/$m^2$(average 366.0 gwwt/$m^2$) in biomass. Cluster and multi-dimensional scaling analyses indicated that the macrozoobenthic community was divided into two distinct groups. Coastal inner stations, where commercial fish cages were established, were dominated by Amphioplus ancistrotus, Scoletoma longifoila and Tharyx sp., whereas open sea stations were dominated by Chaetozone spinosa, Scoletoma longifolia and Capitella capitata. ${\delta}^{13}C$ values of sedimentary organic matter showed a distinct gradient in the range of -18.4 to $-15.2\%_{\circ}$, with a declining trend from the coastal inner stations to open sea stations. This probably reflects the settling rate of organic wastes such as feces and pellets from fish cages near the coastal inner stations. The macrozoobenthos showed a broad ${\delta}^{13}C$ range from -19.5 to $-8.9\%_{\circ}$ at the coastal inner stations, and a relatively narrow range from -21.3 to $-12.9\%_{\circ}$ at the open sea stations. ${\delta}^{13}C$ values of macrozoobenthos paralleled those of sedimentary organic matter, Our isotope results suggested that macrozoobenthos near the coastal inner stations used organic wastes derived from fish cages along with phytoplankton, whereas the macrozoobenthos near the open sea stations used organic wasters derived mainly from phytoplankton.

• The Korean Journal of Malacology
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• v.29 no.1
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• pp.7-13
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• 2013

This study was conducted to find out biological response of Manila clam, Ruditapes philippinarum exposed to lead (Pb). Experimental period was four weeks. Experimental groups were composed of one control condition and three lead exposure conditions (0.25, 0.50 and 1.00 mg/l). The results of the study confirmed that lead induces reduction of survival rate and oxygen consumption rate and histopathology of organ structure of the bivalve. Oxygen consumption rate was observed exposure groups lower than control decline by 25%-72%. Histological analysis of organ system illustrated expansion of hemolymph sinus, disappearance of epidermal layer and degeneration of connective tissue layer of the mantle. Also, histological degenerations as epithelial necrosis and hyperplasia of mucous cells are recognized in the gill and it was observed expansion of hemolymph sinus, disruption of epithelial layer, decrease of mucous cell and degeneration of connective tissue layer in the foot. In the digestive diverticulum, it was showed atrophy of basophilic cell and degeneration of epithelial cell in the digestive tubules, and as the concentration of lead increased the accumulation of lipofuscin increased.

• Journal of Species Research
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• v.9 no.4
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• pp.346-361
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• 2020

In the project of a comprehensive investigation of indigenous prokaryotic species in Korea, a total of 39 bacterial strains phylogenetically belonging to the classes Betaproteobacteria and Gammaproteobacteria were isolated from various environmental sources such as soil, cultivated soil, sludge, seawater, marine sediment, algae, human, tree, moss, tidal flat, beach sand and lagoon. Phylogenetic analysis based on 16S rRNA gene sequences revealed that 39 strains showed the high sequence similarities (≥98.7%) to the closest type strains and formed robust phylogenetic clades with closely related species in the classes Betaproteobacteria and Gammaproteobacteria. In the present study, we report 14 species of 9 genera of four families of two orders in the class Betaproteobacteria and 25 species of 21 genera of 15 families of eight orders in the class Gammaproteobacteria, which have not been reported in Korea. Morphological, biochemical, and physiological characteristics, isolation sources, and NIBR deposit numbers are described in the species descriptions.

• Journal of the Korean Society of Fisheries and Ocean Technology
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• v.57 no.2
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• pp.173-184
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• 2021

In this study, internationally widely utilized bioeconomic models were used to make a comparison and analyze the effectiveness of red snow crab fisheries management measures. As a specific effect analysis, biological and economic effects of both total allowable catch (TAC) and effort reduction management measures were analyzed simultaneously. Model results showed that the red snow crab biomass would be decreased from 106,000 tons to 73,076 tons after ten years when the TAC is set to and maintained at the current level of 26,000 tons. The amount of biomass would be increased to 125,316 tons when the level of TAC is set to 22,000 tons. In cases of reduced fishing efforts, a 30% decrease from the current level would result in greater biomass and NPV would be also estimated at the highest level. In addition, a sensitivity analysis by market price was conducted to analyze the minimum TAC level of the red snow crab offshore pot fishery. Results showed that the minimum TAC level would be 8,210 tons when the market price increased by 30% and it would be also 15,247 tons when the market price decreased by 30%. Furthermore, results of the sensitivity analysis by fishing cost showed that the minimum TAC level was analyzed to be 13,857 tons when the fishing cost increased by 30% from the current level.

• Journal of Species Research
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• v.10 no.2
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• pp.117-133
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• 2021

In 2019, 43 bacterial strains were isolated from food, soil, marine environments, human, and animals related sources from the Republic of Korea. Based on the analysis of 16S rRNA gene sequence, these isolates were allocated to the phyla Bacteroidetes and Firmicutes as unrecorded species in Korea. The 10 Bacteroidetes strains were classified into the families Bacteroidaceae, Chitinophagaceae, Cytophagaceae, Flavobacteriaceae, and Prolixibacteraceae (of the orders Bacteroidales, Chitinophagales, Cytophagales, Flavobacteriales, and Marinilabiliales, respectively). The 33 Firmicutes strains belonged to the families Bacillaceae, Paenibacillaceae, Planococcaceae, Staphylococcaceae, Clostridiaceae, Lachnospiraceae, Peptostreptococcaceae, Enterococcaceae, Lactobacillaceae, Leuconostocaceae, and Streptococcaceae (of the orders Bacillales, Clostridiales, and Lactobacillales). These unrecorded bacteria were determined based on taxonomic criterion (>98.7%; 16S rRNA gene sequence similarity). In addition, their phylogenetic affiliation, as well as cell and colony morphologies, staining reactions, and physiological and biochemical properties were investigated. Therefore, we report 43 isolates as unrecorded species, and described basic features, isolation source, and locations of these strains.

• Ocean and Polar Research
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• v.45 no.2
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• pp.43-55
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• 2023

This study was conducted to understand the seasonal patterns and variation of the copepod community in the Anma Islands of Yeonggwang, Yellow Sea, with a focus on seasonal surveys to assess the factors affecting their occurrence. Throughout the survey period, Acartia hongi, Paracalanus parvus s. l., and Ditrichocorycaeus affinis were dominant species, while Acartia ohtsukai, Acartia pacifica, Bestiolina coreana, Centropages abdominalis, Labidocera rotunda, Paracalanus sp., Tortanus derjugini, Tortanus forcipatus occurred differently by season and station. As a results of cluster analysis, the copepod communities were distinguished into three distinct groups: spring-winter, summer, and autumn. The results of this study showed that the occurrence patterns of copepod species can vary depending on environmental conditions (topographic, distance from the inshore, etc.), and their spatial occurrence patterns between seasons were controlled by water temperature and prey conditions. One of the physical mechanisms that can affect the distribution of zooplankton in the Yellow Sea is the behavior of the Yellow Sea Bottom Cold Water (YSBCW), which shows remarkable seasonal fluctuations. More detailed further studies are needed for clear grounds for mainly why to many Calanus sinicus in the central region of the Yellow Sea are seasonally moving to the inshore, what strategies to seasonally maintain the population, and support the possibilities of complex factors.