1 |
Mitchell, P.S., Parkin, R.K., Kroh, E.M., Fritz, B.R., Wyman, S.K., Pogosova-Agadjanyan, E.L., Peterson, A., Noteboom, J., O'Briant, K.C., Allen, A., Lin, D.W., Urban, N., Drescher, C.W., Knudsen, B.S., Stirewalt, D.L., Gentleman, R., Vessella, R.L., Nelson, P.S., Martin, D.B. and Tewari, M.: Circulating microRNAs as stable blood-based markers for cancer detection. Proceedings of the National Academy of Sciences, 105: 10513-10518, 2008.
DOI
|
2 |
Ohh, M., Park, C.W., Ivan, M., Hoffman, M.A., Kim, T.-Y., Huang, L.E., Pavletich, N., Chau, V. and Kaelin, W.G.: Ubiquitination of hypoxia-inducible factor requires direct binding to the [bgr]-domain of the von Hippel-Lindau protein. Nat. Cell Biol., 2: 423-427, 2000.
DOI
|
3 |
Park, M.H., Bae, S.S., Choi, K.-Y. and Min, D.S.: Phospholipase D2 promotes degradation of hypoxia-inducible factor- independent of lipase activity. Exp. Mol. Med., 47: e196, 2015.
DOI
|
4 |
Poellinger, L. and Johnson, R.S.: HIF-1 and hypoxic response: the plot thickens. Curr. Opin. Genet. Dev., 14: 81-85, 2004.
DOI
|
5 |
Rabalais, N.N., Diaz, R.J., Levin, L.A., Turner, R.E., Gilbert, D. and Zhang, J.: Dynamics and distribution of natural and human-caused hypoxia. Biogeosciences, 7: 585-619, 2010.
DOI
|
6 |
Richards, J.G.: Physiological, behavioral and biochemical adaptations of intertidal fishes to hypoxia. J. Exp. Biol., 214: 191-199, 2011.
DOI
|
7 |
Rosjo, H., Dahl, M.B., Bye, A., Andreassen, J., Jorgensen, M., Wisloff, U., Christensen, G., Edvardsen, T. and Omland, T.: Prognostic value of circulating microRNA-210 levels in patients with moderate to severe aortic stenosis. PLoS One, 9: e91812, 2014.
DOI
|
8 |
Rueda, A., Barturen, G., Lebron, R., Gomez-Martin, C., Alganza, A., Oliver, J.L. and Hackenberg, M.: sRN Atoolbox: an integrated collection of small RNA research tools. Nucleic Acids Res., 43: W467-W473, 2015.
DOI
|
9 |
Semenza, G.L.: Regulation of oxygen homeostasis by hypoxia-inducible factor 1. Physiology, 24: 97-106, 2009.
DOI
|
10 |
Soitamo, A.J., Rabergh, C.M.I., Gassmann, M., Sistonen, L. and Nikinmaa, M.: Characterization of a Hypoxia-inducible Factor (HIF-) from Rainbow Trout: Accumulation of protein occurs at normal venous oxygen tension. J. Biol. Chem., 276: 19699-19705, 2001.
DOI
|
11 |
Stroka, D.M., Burkhardt, T., Desbaillets, I., Wenger, R. H., Neil, D.A.H., Bauer, C., Gassmann, M. and Candinas, D.: HIF-1 is expressed in normoxic tissue and displays an organ-specific regulation under systemic hypoxia. FASEB J., 15: 2445-2453, 2001.
DOI
|
12 |
Sturm, M., Hackenberg, M., Langenberger, D. and Frishman, D.: TargetSpy: a supervised machine learning approach for microRNA target prediction. BMC Bioinformatics, 11: 1-17, 2010.
DOI
|
13 |
Tse, A.C.-K., Li, J.-W., Chan, T.-F., Wu, R.S.-S. and Lai, K.-P.: Hypoxia induces miR-210, leading to anti-apoptosis in ovarian follicular cells of marine medaka Oryzias melastigma. Aquat. Toxicol., 165: 189-196, 2015.
DOI
|
14 |
Valadi, H., Ekstrom, K., Bossios, A., Sjostrand, M., Lee, J.J. and Lotvall, J.O.: Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells. Nat. Cell Biol., 9: 654-659, 2007.
DOI
|
15 |
Ye, J., Fang, L., Zheng, H., Zhang, Y., Chen, J., Zhang, Z., Wang, J., Li, S., Li, R., Bolund, L. and Wang, J.: WEGO: a web tool for plotting GO annotations. Nucleic Acids Res., 34: W293-W297, 2006.
DOI
|
16 |
Zhang, C., Wang, C., Chen, X., Yang, C., Li, K., Wang, J., Dai, J., Hu, Z., Zhou, X., Chen, L., Zhang, Y., Li, Y., Qiu, H., Xing, J., Liang, Z., Ren, B., Yang, C., Zen, K. and Zhang, C.-Y.: Expression profile of microRNAs in serum: A fingerprint for esophageal squamous cell carcinoma. Clin. Chem., 56: 1871-1879, 2010.
DOI
|
17 |
Chan, S.Y. and Loscalzo, J.: MicroRNA-210: A unique and pleiotropic hypoxamir. Cell Cycle, 9: 1072-1083, 2010.
DOI
|
18 |
Bandara, V., Michael, M. and Gleadle, J.: Hypoxia represses microRNA biogenesis proteins in breast cancer cells. BMC Cancer, 14: 533, 2014.
DOI
|
19 |
Bartel, D.P.: MicroRNAs: Genomics, biogenesis, mechanism, and function. Cell, 116: 281-297, 2004.
DOI
|
20 |
Bye, A., Rosjo, H., Aspenes, S.T., Condorelli, G., Omland, T. and Wisloff, U.: Circulating microRNAs and aerobic fitness? The HUNT-Study. PLoS One, 8: e57496, 2013.
DOI
|
21 |
Chan, S.Y., Zhang, Y.-Y., Hemann, C., Mahoney, C.E., Zweier, J.L. and Loscalzo, J.: MicroRNA-210 controls mitochondrial metabolism during hypoxia by repressing the iron-sulfur cluster assembly proteins ISCU1/2. Cell Metabolism, 10: 273-284, 2009.
DOI
|
22 |
Granchi, C., Fancelli, D. and Minutolo, F.: An update on therapeutic opportunities offered by cancer glycolytic metabolism. Bioorg. Med. Chem. Lett., 24: 4915-4925, 2014.
DOI
|
23 |
Cicchillitti, L., Di Stefano, V., Isaia, E., Crimaldi, L., Fasanaro, P., Ambrosino, V., Antonini, A., Capogrossi, M.C., Gaetano, C., Piaggio, G. and Martelli, F.: Hypoxia-inducible factor 1-alpha induces miR-210 in normoxic differentiating myoblasts. J. Biol. Chem., 287: 44761-44771, 2012.
DOI
|
24 |
Enright, A.J., John, B., Gaul, U., Tuschl, T., Sander, C. and Marks, D.S.: MicroRNA targets in Drosophila. Genome Biol., 5: 1-14, 2003.
|
25 |
Gibbings, D.J., Ciaudo, C., Erhardt, M. and Voinnet, O.: Multivesicular bodies associate with components of miRNA effector complexes and modulate miRNA activity. Nat. Cell Biol., 11: 1143-1149, 2009.
DOI
|
26 |
Guimbellot, J.S., Erickson, S.W., Mehta, T., Wen, H., Page, G.P., Sorscher, E.J. and Hong, J.S.: Correlation of microRNA levels during hypoxia with predicted target mRNAs through genome-wide microarray analysis. BMC Med. Genomics, 2: 1-17, 2009.
DOI
|
27 |
Huang, X., Le, Q.-T. and Giaccia, A.J.: MiR-210 - micromanager of the hypoxia pathway. Trends Mol. Med., 16: 230-237, 2010.
DOI
|
28 |
Ho, A.S., Huang, X., Cao, H., Christman-Skieller, C., Bennewith, K., Le, Q.-T. and Koong, A.C.: Circulating miR-210 as a novel hypoxia marker in pancreatic cancer. Transl. Oncol., 3: 109-113, 2010.
DOI
|
29 |
Hua, Z., Lv, Q., Ye, W., Wong, C.-K.A., Cai, G., Gu, D., Ji, Y., Zhao, C., Wang, J., Yang, B.B. and Zhang, Y.: MiRNA-directed regulation of VEGF and other angiogenic factors under hypoxia. PLoS One, 1: e116, 2006.
DOI
|
30 |
Huang, X., Ding, L., Bennewith, K.L., Tong, R.T., Welford, S.M., Ang, K.K., Story, M., Le, Q.-T. and Giaccia, A.J.: Hypoxia-inducible mir-210 regulates normoxic gene expression involved in tumor initiation. Mol. Cell, 35: 856-867, 2009.
DOI
|
31 |
Hutvagner, G. and Zamore, P.D.: A microRNA in a multiple-turnover RNAi enzyme complex. Science, 297: 2056-2060, 2002.
DOI
|
32 |
Ivan, M., Harris, A.L., Martelli, F. and Kulshreshtha, R.: Hypoxia response and microRNAs: no longer two separate worlds. J. Cell. Mol. Med., 12: 1426-1431, 2008.
DOI
|
33 |
Iwasaki, S., Kobayashi, M., Yoda, M., Sakaguchi, Y., Katsuma, S., Suzuki, T. and Tomari, Y.: Hsc70/Hsp90 chaperone machinery mediates ATP-dependent RISC loading of small RNA duplexes. Mol. Cell, 39: 292-299, 2010.
DOI
|
34 |
John, B., Enright, A.J., Aravin, A., Tuschl, T., Sander, C. and Marks, D.S.: Human microRNA targets. PLoS Biol., 2: e363, 2004.
DOI
|
35 |
Kallio, P.J., Pongratz, I., Gradin, K., McGuire, J. and Poellinger, L.: Activation of hypoxia-inducible factor : Posttranscriptional regulation and conformational change by recruitment of the Arnt transcription factor. Proceedings of the National Academy of Sciences, 94: 5667-5672, 1997.
DOI
|
36 |
Lau, K., Lai, K.P., Bao, J.Y.J., Zhang, N., Tse, A., Tong, A., Li, J.W., Lok, S., Kong, R.Y.C., Lui, W.Y., Wong, A. and Wu, R.S.S.: Identification and expression profiling of microRNAs in the brain, liver and gonads of marine medaka (Oryzias melastigma) and in response to hypoxia. PLoS One, 9: e110698, 2014.
DOI
|
37 |
Katakowski, M., Buller, B., Wang, X., Rogers, T. and Chopp, M.: Functional microRNA is transferred between glioma cells. Cancer Res., 70: 8259-8263, 2010.
DOI
|
38 |
Kharaziha, P., Ceder, S., Li, Q. and Panaretakis, T.: Tumor cell-derived exosomes: A message in a bottle. Biochimica et Biophysica Acta (BBA) - Reviews on Cancer, 1826: 103-111, 2012.
DOI
|
39 |
Kulshreshtha, R., Ferracin, M., Wojcik, S.E., Garzon, R., Alder, H., Agosto-Perez, F.J., Davuluri, R., Liu, C.-G., Croce, C.M., Negrini, M., Calin, G.A. and Ivan, M.: A microRNA signature of hypoxia. Mol. Cell. Biol., 27: 1859-1867, 2007.
DOI
|
40 |
Lai, K.P., Li, J.-W., Tse, A.C.-K., Chan, T.-F. and Wu, R.S.S.: Hypoxia alters steroidogenesis in female marine medaka through miRNAs regulation. Aquat. Toxicol., 172: 1-8, 2016.
DOI
|
41 |
Lays, N., Iversen, M.M.T., Frantzen, M. and Jorgensen, E.H.: Physiological stress responses in spotted wolffish (Anarhichas minor) subjected to acute disturbance and progressive hypoxia. Aquaculture, 295: 126-133, 2009.
DOI
|
42 |
Minet, E., Mottet, D., Michel, G., Roland, I., Raes, M., Remacle, J. and Michiels, C.: Hypoxia-induced activation of HIF-1: role of HIF--Hsp90 interaction. FEBS Lett., 460: 251-256, 1999.
DOI
|