• Microbiology and Biotechnology Letters
• /
• v.29 no.2
• /
• pp.72-77
• /
• 2001

Expression of f3 ~agarase Gene and Catabolite Repression in Escherichia coli by the Promoter of Alginate Lyase Gene Isolated from Marine Pseudomonas sp. Jin, Cheal~Ho, J~Hyeon Park, Jeong-Hyun Han, YoonM Hyeok Chae, Jong~Hee Lee, Jung-Kee Lee!, and In-800 Kong*. Faculty of Food Science and Biotechnology, Pukyong National UniversitYt Pusan 608-737, Korea, llnBioNet Co. 1690-3 Taejon 306-230, Korea - Promoter is a key factor for expression of the recombinant protein. There are many promoters for overexpression of protein in various organisms. The aly promoter of Pseudomonas sp. W7 isolated from marine environment was known to be a constitutive expression promoter of the alginate lyase gene, and it's promoter activity is repressed by glucose in Escherichia coli. To investigate the catabolite repression of the aly promoter ~md association between the promoter mutants, f3 agarase gene, which was also cloned from Pseudomonas sp. W7 was connected to the aly promoter with the sequence the coding 46 N-terminal amino acids ofthe alginate lyase gene. The constructed plasmid was introduced into E. coli and the agarase activity was measured. Fourty six amino acids of the alginate lyase gene was serially deleted using peR to the direction of 5' upstream region and subcloned. The agarase was overexpressed by the aly promoter and the production of agarase was repressed by the addition of glucose into culture media. Fourty six amino acids of alginate lyase did not affect the production of agarase at all. The deletion of a putative stem-loop structure in the aly promoter induced the decrease of f3 -agarase productivity.

• Journal of the Korean Society of Marine Environment & Safety
• /
• v.22 no.2
• /
• pp.220-227
• /
• 2016

In this paper, polychlorinated biphenyls (PCBs) were measured in surface sediments collected three times (June, October, December, 2013), inside Jeju Harbor as major harbors of Jeju Island. The concentration of PCBs inside Jeju Harbor was in the range of 1.62~4.45 (mean) ng/g on a dry weight basis and the levels were very low. In the analysis of PCBS homologue patterns, high-chlorinated PCB congeners were dominant in surface sediments inside Jeju Harbor, indicating that their sources were originated from shipping activity. In the relationships between PCBs concentrations and particle size (mud, sand and gravel) in surface sediments, PCBs concentrations were higher in the sediments with higher mud content, indicating that higher PCBs were distributed with increasing sediments of fine gradules. The PCBs concentrations in surface sediments in this study were very low, compared with ER-L (effect range-low) and TEL (threshold effects level) among sediment quality guideleines (SQGs) applied in foreign countries, such as USA, Canada, and Australia, etc), indicating that their biological effects on the bottom organisms in marine environment were expected to be very low.

• Journal of the Korea Academia-Industrial cooperation Society
• /
• v.14 no.8
• /
• pp.4086-4092
• /
• 2013

Mycosporine-like amino acids (MAAs) are UV-absorbing substances, and diverse marine organisms have the evolved the capacity to diminished the direct and indirect damaging effects of environmental ultraviolet radiation by synthesis and accumulation of MAAs. In this study, we manufactured a radiofrequency (RF) generation device and applied to microalgal culture. $0.35{\pm}0.05$ mHz of RF was supplied to culture vessel for Chlamydomonas sp. and samples were harvested at the designated time intervals (1, 0.5, 1 and 2 hr). MAAs biosynthetic genes, dehydroquinate synthase homolog (DHQS-like) and nonribosomal peptide synthetase homolog (NRPS-like), were cloned from Chlamydomonas sp. and their gene expressions under the RF exposure were analyzed using qRT-PCR. DHQS-like and NRPS-like gene expressions of Chlamydomonas sp. exposed to RF were increased 1.46 and 1.19 fold at 1 hr, respectively. These results means that DHQS-like and NRPS-like genes can be good biomarker candidates for diagnosis of MAAs biosynthesis in the Chlamydomonas sp.

• Journal of the Korean Society of Marine Environment & Safety
• /
• v.26 no.1
• /
• pp.84-92
• /
• 2020

To supply a stable amount of standard material to detect paralytic shellfish toxin (PST), we examined possible increases in toxic content in Alexandrium catenella and A. pacificum using a light emitting diode (LED), which is one of the most eco-friendly and economical lighting method. When comparing the growth rates of organisms and wavelengths of light used, the half saturation constants (Ks) of red wavelength were higher than those of other wavelengths. In contrast, the Ks of blue wavelength were lower than those of other wavelengths. Moreover, when comparing the toxic contents and wavelengths of light used, red wavelength produced approximately 8 times more toxic content in A. catenella and approximately 3.2 times more toxic content in A. pacificum than other wavelengths. Thus, the toxic content present in the organism might be closely related to the Ks of light. The optimum light source to be used to ensure economically ef ective and productive growth in an Alexandrium culture system (photo-bioreactor) would likely consist of a two-phase culture, wherein a blue LED is used during the lag and exponential phases to increase growth rates, followed by the use of a red LED during late exponential and stationary phases to achieve increased PST yields.

• Korean Journal of Ichthyology
• /
• v.24 no.2
• /
• pp.125-130
• /
• 2012

We describe early morphological development in laboratory-reared specimens of the brown croaker, Miichthys miiuy, in relation to fin differentiation, head dimensions, and squamation. From the yolk sac stage to the flexion larval stage (a period of 12 days following hatching, at which time the larvae were <4.2 mm in total length; TL) we observed the presence of a fin-fold around the body, while the caudal fin appeared rounded and lacked scales. Rays developed in the dorsal, anal, and pectoral fins in a process that was almost complete in larvae 12 days, while ray segmentation occurred between 26 and 29 days of age. Elongation of the middle rays of the caudal fin was initiated at 32 days, and the rays were remarkably elongated by 37 days. By 68 days the caudal fin was lanceolated (50.7 mm TL). Scales began to develop from the midlateral lines of the caudal peduncle at 9.1mm TL (28 days), eventually encompassing the entire operculum (22.1 mm TL; 44 days). The head dimensions were largely stabilized at >12 mm TL (30 day).

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
• /
• v.17 no.1
• /
• pp.25-31
• /
• 2012

The frequency and abundance of jellyfish, presumably related with climate change, fisheries overexploitation, marine pollution including land reclamation and dyke construction, are increasing worldwide. This feature has attracted interest and concerns from general public and public officials, and government is seeking how the damages could be prevented or reduced down. Korean government, having recent huge blooms of jellyfish, engaged in reducing and/or countermeasuring jellyfish damages. Korean research themes include ecology and physiology of blooming jellyfish species, understanding of the blooming mechanism, and focus on the eradication of blooming jellyfish, without governmental integrative management plan. EU is undertaking scientific projects focused on understanding of the mechanism and control of jellyfish blooms, and establishment of an integrative management. In USA, government has established the code on jellyfish management for conserving and protecting the fish and shellfish resources and one of its department is specially assigned to monitor jellyfish appearance, undertake research, and prepare management plan. Japan also assigned a department and research institute for jellyfish research. Their main interest is to predict jellyfish drifting and mass bloom. Compared to Korea, USA, EU and Japan emphasize integrative management that includes ecological understanding, public education and outreaches, communication and control, if possible, of jellyfish blooms, based on scientific data. We suggest then, 1) establishment of an integrative scientific system consisting of policy and scientific experts to prepare inter-ministrial integrative management plan to effectively combat jellyfish blooms and to maximize the scientific result; 2) concept change from harmful to exploitable marine animal in policy making and research; and 3) active education and information service for people. We expect that these suggestions can be useful for jellyfish management and policy making on another harmful marine organisms.

• ALGAE
• /
• v.32 no.3
• /
• pp.199-222
• /
• 2017

Occurrence of Cochlodinium polykrikoides red tides have resulted in considerable economic losses in the aquaculture industry in many countries, and thus predicting the process of C. polykrikoides red tides is a critical step toward minimizing those losses. Models predicting red tide dynamics define mortality due to predation as one of the most important parameters. To investigate the roles of heterotrophic protists in red tide dynamics in the South Sea of Korea, the abundances of heterotrophic dinoflagellates (HTDs), tintinnid ciliates (TCs), and naked ciliates (NCs) were measured over one- or two-week intervals from May to Nov 2014. In addition, the grazing impacts of dominant heterotrophic protists on each red tide species were estimated by combining field data on red tide species abundances and dominant heterotrophic protist grazers with data obtained from the literature concerning ingestion rates of the grazers on red tide species. The abundances of HTDs, TCs, and NCs over the course of this study were high during or after red tides, with maximum abundances of 82, 49, and $35cells\;mL^{-1}$, respectively. In general, the dominant heterotrophic protists differed when different species caused red tides. The HTDs Polykrikos spp. and NCs were abundant during or after C. polykrikoides red tides. The mean and maximum calculated grazing coefficients of Polykrikos spp. and NCs on populations of co-occurring C. polykrikoides were $1.63d^{-1}$ and $12.92d^{-1}$, respectively. Moreover, during or after red tides dominated by the phototrophic dinoflagellates Prorocentrum donghaiense, Ceratium furca, and Alexandrium fraterculus, which formed serial red tides prior to the occurrence of C. polykrikoides red tides, the HTDs Gyrodinium spp., Polykrikos spp., and Gyrodinium spp., respectively were abundant. The maximum calculated grazing coefficients attributable to dominant heterotrophic protists on co-occurring P. donghaiense, C. furca, and A. fraterculus were 13.12, 4.13, and $2.00d^{-1}$, respectively. Thus, heterotrophic protists may sometimes have considerable potential grazing impacts on populations of these four red tide species in the study area.

• Korean Journal of Environmental Biology
• /
• v.38 no.3
• /
• pp.355-370
• /
• 2020

We conducted a field survey to analyze the ecological structure and spatial distribution of microplankton (phytoplankton and ciliates) in relation to water masses at 21 stations on the surface and chlorophyll-a maximum layers (CML) in the Northern East China Sea (nECS; 32°-33°N; 124°00'-127°30'E) from August 3 to August 6, 2019. The results showed that the water masses were divided into Chinese Coastal Waters (CCW) and the Tsushima Warm Current (TWC). The CCW showed the environmental characteristics of high temperature and low salinity, and the TWC showed high temperature and high salinity. The characteristics of the phytoplankton community in the CCW showed various community structures related to the nutrients supplied from the large rivers of the Chinese continent. However, the TWC had simple community structures because it originated near the equator and moved northward. The standing crops of phytoplankton and ciliates were very high in the CCW but showed low at the TWC. In particular, from the higher standing crops of protozoa than plant plankton at the TWC, the energy flow at the lower tropic levels caused by the microbial loop that fed on heterotrophic bacteria played an important role in the production of resource organisms. In other words, the marine ecological structure of the nECS in summer could be estimated as a bottom-up system at the CCW and a top-down system at the TWC.

• Journal of the Korean Society of Marine Environment & Safety
• /
• v.23 no.6
• /
• pp.677-683
• /
• 2017

In this study, we examined responses to Sea Surface Temperature (SST) as the result of an intensive heat wave that took place in August 2016 and the cross correlation between SST and Air Temperature (AT) in August 2016. The data used included the SST of 8 ocean buoys, provided by the National Institute of Fisheries Science, and the AT of AWS near those 8 ocean buoys recorded every hour. To identify an appropriate data period, on FIR filter was applied. Two locations in the south sea were selected to be observed over similar a period, with a high correlation coefficient of about 0.8 and a time lag of about 50 hours between AT and SST. For the yellow sea, due to shallow waters and tidal currents, SST showed a rapid response caused by changes in AT. The east sea showed a negative correlation between AT and SST because of significant water depth and marine environment factors. By identifying the time lag between AT and SST, damage to aquatic organisms can be minimized, and we expect to develop a rapid response system for damage to the fishery industry caused by extreme heat waves.

• Journal of Life Science
• /
• v.28 no.12
• /
• pp.1424-1431
• /
• 2018

We prepared flocculated detritus-like organic marine snow originating from various organisms by fermentation using microorganisms; this fermented organic material was fed to the leptocephali of the eel (Anguilla japonica) to investigate whether or not such organic matter was an appropriate food source for the larvae. A strain was isolated from a biofloc technology system used to culture fish, and seven types of organic material from hen's egg, eel muscle, tuna muscle, lugworm, shrimp, manila clam, mussel, and sea squirt were fermented using isolated bacteria (Bacillus sp.). The fermented matter did not show any specific form and was larger than $10-20{\mu}m$ but no more than $100{\mu}m$ in size. Four diets (A-D) were prepared using the various fermented products, and the larvae were fed the prepared food from 20 days after hatching. The leptocephali fed the A, B, and C diets survived until 37, 39, and 37 days after hatching, respectively. However, the leptocephali fed the D diet survived for 60 days after hatching. The protein content of each diet was very similar, but the n-3 HUFA concentration in the D diet was approximately twice as high as that of the others.