• Title/Summary/Keyword: MSL

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Examination of Cross-calibration Between OSMI and SeaWiFS: Comparison of Ocean Color Products

  • Lee, Sun-Gu;Kim, Yong-Seung
    • Proceedings of the KSRS Conference
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    • 2002.10a
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    • pp.209-215
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    • 2002
  • Much effort has been made in the radiometric calibration of the ocean scanning multispectral imager (OSMI) since after the successful launch of KOMPSAT-1 in 1999. A series of calibration coefficients for OSMI detectors were obtained in collaboration with the NASA Sensor Intercomparison and Merger for Biological and Interdisciplinary (SIMBIOS) project office. In this study, we compare the OSMI level-2 products (e.g., chlorophyll-a concentration) calculated from the NASA cross-calibration coefficients with the SeaWiFS counterparts. Sample study areas are some of diagonostic data sites recommended by the SIMBIOS working group. We will present the preliminary results of this comparative study.

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Investigation on Lipopolysaccharide Activated Microglia by Phosphoproteomics and Phosphoinositide Lipidomics

  • Kim, Young Jun;Kim, Hackyoung;Noh, Kwangmo
    • Mass Spectrometry Letters
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    • v.5 no.3
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    • pp.70-78
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    • 2014
  • Microglia are the confined immune cells of the central nervous system (CNS). In response to injury or infection, microglia readily become activated and release proinflammatory mediators that are believed to contribute to microglia-mediated neurodegeneration. In the present study, inflammation was induced in the immortalized murine microglial cell line BV-2 by lipopolysaccharide (LPS) treatment. We firstly performed phosphoproteomics analysis and phosphoinositide lipidomics analysis with LPS activated microglia in order to compare phosphorylation patterns in active and inactive microglia and to detect the pattern of changes in phosphoinositide regulation upon activation of microglia. Mass spectrometry analysis of the phosphoproteome of the LPS treatment group compared to that of the untreated control group revealed a notable increase in the diversity of cellular phosphorylation upon LPS treatment. Additionally, a lipidomics analysis detected significant increases in the amounts of phosphoinositide species in the LPS treatment. This investigation could provide an insight for understanding molecular mechanisms underlying microglia-mediated neurodegenerative diseases.

Isotopic Analysis of NUSIMEP-6 Uranium Particles using SEM-TIMS

  • Park, Jong-Ho;Park, Sujin;Song, Kyuseok
    • Mass Spectrometry Letters
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    • v.4 no.3
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    • pp.51-54
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    • 2013
  • Isotopic analysis using thermal ionization mass spectrometry coupled with scanning electron microscopy (SEM-TIMS) was performed to determine the isotopic ratios of uranium contained in micro-particles in the 6th Nuclear Signatures Interlaboratory Measurement Evaluation Programme (NUSIMEP-6) sample. Elemental analysis by energy dispersive X-ray spectroscopy (EDS) was conducted on uranium-bearing mirco-particles, which were transferred to rhenium filaments for TIMS loading using a micromanipulation system in a SEM. A multi-ion-counter system was utilized to detect the ion signals of the four isotopes of uranium simultaneously. The isotope ratios of uranium corrected by bracketing using a reference material showed excellent agreement with the certified values. The measurement accuracy for $n(^{234}U)/n(^{238}U)$ and (b) $n(^{235}U)/n(^{238}U)$ was 10% and 1%, respectively, which met the requirements for qalification for the NetWork of Analytical Laboratories (NWAL).

Observations on Fragmentation Pathway of Farinomalein and its Isomers by Structural Investigation Using LC-MS/MS

  • Firke, Narayan P.;Markandeya, Anil G.;Deshmukh, Rajendra S. Konde;Pingale, Shirish S.
    • Mass Spectrometry Letters
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    • v.9 no.1
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    • pp.37-40
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    • 2018
  • Farinomalein is a maleimide-bearing compound well known for its anti-fungal activity. In the present study, synthesis of farinomalein is achieved via Stobbe condensation followed by Haval-Argade contrathermodynamic rearrangement. Kinetically driven Stobbe condensation followed by condensation with beta-alanine reveals formation of two isomers of farinomalein. This article describes application of LC-MS/MS in structure elucidation of farinomalein 1 and its isomers 2 and 3 encountered in its synthesis. The proposed distinct fragmentation pathway is supported by rational organic reaction mechanism. These fragmentation pathways are significant for analytical method development of farinomalein in near future. The structures of farinomalein 1 and its isomers 2 and 3 have been assigned undisputedly.

Recent Progress on Microfluidic Electrophoresis Device Application in Mass Spectrometry

  • Roy, Swapan Kumar;Kim, Seongnyeon;Yoon, Jung H.;Yoon, Yong-Kyu;Cho, Kun
    • Mass Spectrometry Letters
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    • v.9 no.1
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    • pp.1-16
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    • 2018
  • Microfluidic technologies hold high promise and emerge as a potential molecular tool to facilitate the progress of fundamental and applied biomedical researches by enabling miniaturization and upgrading current biological research tools. In this review, we summarize the state of the art of existing microfluidic technologies and its' application for characterizing biophysical properties of individual cells. Microfluidic devices offer significant advantages and ability to handle in integrating sample processes, minimizing sample and reagent volumes, and increased analysis speed. Therefore, we first present the basic concepts and summarize several achievements in new coupling between microfluidic devices and mass spectrometers. Secondly, we discuss the recent applications of microfluidic chips in various biological research field including cellular and molecular level. Finally, we present the current challenge of microfluidic technologies and future perspective in this study field.

Structural Analysis of [Cu(II)-amyloidogenic peptide] Complexes

  • Cha, Eugene;Seo, Jae-Hong;Kim, Ho-Tae
    • Mass Spectrometry Letters
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    • v.9 no.1
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    • pp.17-23
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    • 2018
  • Studies on the interactions of amyloidogenic proteins with trace metals, such as copper, have indicated that the metal ions perform a critical function in the early oligomerization process. Herein, we investigate the effects of Cu(II) ions on the active sequence regions of amyloidogenic proteins using electrospray ionization mass spectrometry (ESI-MS) and collision induced dissociation tandem MS (CID-MS/MS). We chose three amyloidogenic peptides NNQQNY, LYQLEN, and VQIVYK from yeast prion like protein Sup35, insulin chain A, and tau protein, respectively. [Cu-peptide] complexes for all three peptides were observed in the mass spectra. The mass spectra also show that increasing Cu(II) concentrations decrease the population of existing peptide oligomers. The tandem mass spectrum of NNQQNY shows preferential binding for the N-terminal region. All three peptides are likely to appear to be in a Cu-monomer-monomer (Cu-M-M) structure instead of a monomer-Cu-monomer (M-Cu-M) structure.

Fast Screening of Harmful Disinfectants in Household Products via Low-Temperature Plasma Ionization-Mass Spectrometry

  • Lee, Hyoung Jun;Kweon, Gi Ryang;Yim, Yong-Hyeon
    • Mass Spectrometry Letters
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    • v.8 no.2
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    • pp.44-47
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    • 2017
  • Isothiazolinone derivatives are widely used in consumer products as disinfectants or preservatives, but there are growing concerns about their impact on human health. Therefore, rapid screening of these biocides is very important for proper control and regulation of potentially hazardous substances. To this end, low-temperature plasma (LTP) ionization mass spectrometry (MS) was investigated to demonstrate its potential for direct and selective analysis of isothiazolinones from sprayed aerosol samples. Benzisothiazolinone (BIT) was clearly identified from a commercial fabric deodorant using LTP ionization MS and MS/MS. LTP allowed selective ionization of BIT directly from the simply sprayed aerosol sample and illustrated its potential for fast screening without sample pre-treatments. Selective nature of LTP ionization, on the other hands, implicates use of LTP ionization MS as a general screening method for specific groups of hazardous chemicals in commercial products.

Examination of Cross-calibration Between OSMI and SeaWiFS: Comparison of Ocean Color Products

  • Kim, Yong-Seung;Lee, Sun-Gu
    • Korean Journal of Remote Sensing
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    • v.19 no.3
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    • pp.201-208
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    • 2003
  • Much effort has been made in the radiometric calibration of the ocean scanning multispectral imager (OSMI) since after the successful launch of KOMPSAT-1 in 1999. A series of calibration coefficients for OSMI detectors were obtained in collaboration with the NASA Sensor Intercomparison and Merger for Biological and Interdisciplinary (SIMBIOS) project office. In this study, we ompare the OSMI level-2 products (e.g., chorophyll-a concentration) calculated from the NASA cross-calibration coefficients with the SeaWiFS counterparts. Sample study areas are some of diagonostic data sites recommended by the SIMBIOS working group. Results of this study show that the OSMl-derived chlorophyll-a concentration agrees well with the SeaWiFS counterpart in Case 1 water; however, differences become larger in Case 2 water.

Recent Advances of MALDI-Mass Spectrometry Imaging in Cancer Research

  • Jung, Joohee
    • Mass Spectrometry Letters
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    • v.10 no.3
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    • pp.71-78
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    • 2019
  • For several decades, cancer has been the primary cause of mortality worldwide. New diagnosis and regimens have been developed to improve the chemotherapeutic efficacy and the quality of life of the patients. However, cancer tissues are complex and difficult to assess. Understanding the various properties of the tumor and its environment is crucial for cancer and pharmaceutical research. Several analytical techniques have been providing new insights into cancer research. Recently, matrix-assisted laser desorption ionization (MALDI)-mass spectrometry imaging (MSI), an advanced analytical technique, has been applied to translational research. Proteomic and lipidomic profiling obtained by MALDI-MSI has been critical for biomarker discovery and for monitoring heterogenous tumor tissues. In this review, we discuss technical approaches, benefits and recent applications of MALDI-MSI as a valuable tool in cancer research, namely for diagnosis, therapy, prognosis.

Effect of Microwave Irradiation Time on Microwave-Assisted Weak Acid Protein Hydrolysis

  • Kim, Dahee;Joo, Minhee;Lee, Dabin;Nguyen, Huu-Quang;Kim, Jeongkwon
    • Mass Spectrometry Letters
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    • v.10 no.3
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    • pp.79-83
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    • 2019
  • Horse heart myoglobin (MYG) and bovine serum albumin (BSA) were hydrolyzed by microwave-assisted weak-acid hydrolysis for 10, 20, 30, 40, 50, and 60 min using 2% formic acid (FA) at $100^{\circ}C$. Generally, the number of identified peptides increased with increasing irradiation time, indicating that the duration of microwave irradiation is linked to the efficiency of hydrolysis. For MYG, irradiation for 60 min provided the highest number of identified peptides, the greatest sequence coverage values and the highest MASCOT score values among the investigated irradiation times. Irradiation of BSA for 50 min, however, yielded a greater number of peptides than irradiation for 60 min due to the generation of miscleaved peptides after microwave irradiation for 50 min.