• Title/Summary/Keyword: Long-range Correlation

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DNA Ploidy and S-phase Fraction Analysis in Paediatric B-cell Acute Lymphoblastic Leukemia Cases: a Tertiary Care Centre Experience

  • Kumar, Banothu Kiran;Bhatia, Prateek;Trehan, Amita;Singh, Ajit Pal;Kaul, Deepak;Bansal, Deepak
    • Asian Pacific Journal of Cancer Prevention
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    • v.16 no.17
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    • pp.7917-7922
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    • 2015
  • DNA ploidy is an important prognostic parameter in paediatric B-ALL, but the significance of the S-phase fraction is unclear. In present study, DNA ploidy was assessed in 40 pediatric B-ALL cases by flow cytometry. The DI (DNA index) and percentage of cells in S-phase were calculated using Modfit software. Aneuploidy was noted in 26/40 (65%) cases. A DI of 1.10-1.6 (hyperdiploidy B) was noted in 20/40 (50%) and 6/40 (15%) had a DI>1.60 (triploid and tetraploid range). Some 14/40 (35%) cases had a diploid DI between 0.90-1.05. None of the cases had a DI <0.90 (hypodiploid) or in the 1.06-1.09 (hyperdiploid A) range. The mean S-phase fraction was 2.6%, with 24/40 (60%) having low and 16/40 (40%) high S-phase fractions. No correlation was noted with standard ALL risk and treatment response factors with DI values or S-phase data, except for a positive correlation of low S-phase with high NCI risk category (p=0.032). Overall frequency of hyperdiploidy in our cohort of B-ALL patients was very high (65%). No correlation between hyperdiploidy B and low TLC or common B-phenotype was observed in our study as 42% cases with DI 1.10-1.6 had TLC> $50{\times}10^9$ and 57.1% CD 10 negativity. The study also highlighted that S-phase fraction analysis does not add any prognostic information and is not a useful parameter for assessment in ALL cases. However, larger studies with long term outcome analysis are needed to derive definitive conclusions.

Evaluation of Long-Term Seasonal Predictability of Heatwave over South Korea Using PNU CGCM-WRF Chain (PNU CGCM-WRF Chain을 이용한 남한 지역 폭염 장기 계절 예측성 평가)

  • Kim, Young-Hyun;Kim, Eung-Sup;Choi, Myeong-Ju;Shim, Kyo-Moon;Ahn, Joong-Bae
    • Atmosphere
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    • v.29 no.5
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    • pp.671-687
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    • 2019
  • This study evaluates the long-term seasonal predictability of summer (June, July and August) heatwaves over South Korea using 30-year (1989~2018) Hindcast data of the Pusan National University Coupled General Circulation Model (PNU CGCM)-Weather Research and Forecasting (WRF) chain. Heatwave indices such as Number of Heatwave days (HWD), Heatwave Intensity (HWI) and Heatwave Warning (HWW) are used to explore the long-term seasonal predictability of heatwaves. The prediction skills for HWD, HWI, and HWW are evaluated in terms of the Temporal Correlation Coefficient (TCC), Root Mean Square Error (RMSE) and Skill Scores such as Heidke Skill Score (HSS) and Hit Rate (HR). The spatial distributions of daily maximum temperature simulated by WRF are similar overall to those simulated by NCEP-R2 and PNU CGCM. The WRF tends to underestimate the daily maximum temperature than observation because the lateral boundary condition of WRF is PNU CGCM. According to TCC, RMSE and Skill Score, the predictability of daily maximum temperature is higher in the predictions that start from the February and April initial condition. However, the PNU CGCM-WRF chain tends to overestimate HWD, HWI and HWW compared to observations. The TCCs for heatwave indices range from 0.02 to 0.31. The RMSE, HR and HSS values are in the range of 7.73 to 8.73, 0.01 to 0.09 and 0.34 to 0.39, respectively. In general, the prediction skill of the PNU CGCM-WRF chain for heatwave indices is highest in the predictions that start from the February and April initial condition and is lower in the predictions that start from January and March. According to TCC, RMSE and Skill Score, the predictability is more influenced by lead time than by the effects of topography and/or terrain feature because both HSS and HR varies in different leads over the whole region of South Korea.

A Study on the Characteristics of Summer Water Temperature Fluctuations by Spectral Analysis in Coast of Korea in 2016 (스펙트럼 분석을 통한 2016년 하계 한국연안의 수온변동 특성에 관한 연구)

  • Seo, Ho-San;Jeong, Yong-Hyun;Kim, Dong-Sun
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.26 no.2
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    • pp.186-194
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    • 2020
  • In this study, spectral analysis was conducted to identify environmental factors af ecting short-term changes in water temperature in the East, West and South coasts of Korea. The data used in the spectrum analysis is the 2016 summer water temperature, air temperature, tide level and wind data provided by Korea Hydrographic & Oceanographic Agency. In power spectrum results, peaks of water temperature and tide level were observed at same periods in West Sea (Incheon, Pyeungteak, Gunsan and Mokpo) and South Sea (Wando, Goheung, Yeosu, Tongyeong and Masan) where mean tidal range was more than 100 cm. On the other hand, periodicity of water temperature did not appear in East Sea and Busan where the mean tidal range was small. Coherence analysis showed that water temperature was highly correlated with tide in West Sea and three stations(Wando, Goheung and Tongyeong) of South Sea. Especially, correlation between water temperature and tide level in Wando and Tongyeong presented 0.96 at semi-diurnal period. Water temperature in Yeosu seems to have influenced by tide and inflow of fresh water. In Masan, water temperature is influenced by south wind, tide and inflow of fresh water. In East Sea, influence of tide on water temperature is small due to current and small tidal range. As a result of comparing the time series graph, stations where the correlation between water temperature and tide is high show that relatively cold water was inputted at flood tide and flow out at ebb tide. short-term variation of water temperature was affected by tide, but long-term variation over a month was affected by air temperature.

Structural and Magnetic Properties of Epitaxial FexCo100-x Alloys Grown on Cr Substrate

  • Hossain, M.B.;Kim, C.G.;Chun, B.S.;Kim, W.D.;Hwang, C.
    • Journal of Magnetics
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    • v.19 no.1
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    • pp.1-4
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    • 2014
  • We report the correlation between the magnetic properties and lattice parameter of $Fe_xCo_{100-x}$ alloys as a function of constituent concentration. The saturation magnetization increases with Fe content and has a maximum value at approximately x=70 at.%. However, collapse in relative saturation magnetization is observed at approximately 30 at.% to 70 at.% of Fe in $Fe_xCo_{100-x}$ alloys. The collapse is due to the formation of Co-Co and Fe-Fe antibonding states instead of Fe-Co bonds. The lattice parameter also shrinks at approximately 30 at.% to 70 at.% of Fe. This shrinkage is due to an increase in the number of nearest neighbor antisite atoms, which then leads to a decrease in the long range order parameter.

Stochastic Multiple Input-Output Model for Extension and Prediction of Monthly Runoff Series (월유출량계열의 확장과 예측을 위한 추계학적 다중 입출력모형)

  • 박상우;전병호
    • Water for future
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    • v.28 no.1
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    • pp.81-90
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    • 1995
  • This study attempts to develop a stochastic system model for extension and prediction of monthly runoff series in river basins where the observed runoff data are insufficient although there are long-term hydrometeorological records. For this purpose, univariate models of a seasonal ARIMA type are derived from the time series analysis of monthly runoff, monthly precipitation and monthly evaporation data with trend and periodicity. Also, a causual model of multiple input-single output relationship that take monthly precipitation and monthly evaporation as input variables-monthly runoff as output variable is built by the cross-correlation analysis of each series. The performance of the univariate model and the multiple input-output model were examined through comparisons between the historical and the generated monthly runoff series. The results reveals that the multiple input-output model leads to the improved accuracy and wide range of applicability when extension and prediction of monthly runoff series is required.

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Effects of Seed Size and Temperature on Hypocotyl Elongation in Mungbean (녹두품종별 종실크기 및 온도처리에 따른 하배축 신장성)

  • 이성춘;김동철;임태곤;송동석
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.41 no.6
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    • pp.634-639
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    • 1996
  • This experiment was conducted to evaluate the variability of hypocotyl elongation of mungbean varieties. With four mungbean cultivars, which were classified as 4234-697 and Keumsungnogdu(long), Nampyungnogdu(Medium), and Seonhwanogdu(short), hypocotyl elong-ation was measured 4 to 6 days after seeding in paper towel at different temperatures (15, 20, 25, 30, and 35$^{\circ}C$). Hypocotyl elongation of mungbean seed stored at 5$\pm$1$^{\circ}C$ for 6 months was compared with of seed stored at room temperature. As the temperature rises, the hypocotyl is longer. The hypocotyl elongation started immediately at high temperature, and longest at the range of 30 to 35$^{\circ}C$. The hypocotyl elongation became longer at the 5$^{\circ}C$ storage plot than at the room temperature plot. Correlation coefficient (r) between 100 seed weight and hypocotyllength are not significant.

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The Characteristics of Chemical Components and Acidity in the Precipitation at Kimhae Area (김해지방의 강수의 산도 및 화학적 성분 특성)

  • 박종길;황용식
    • Journal of Environmental Science International
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    • v.6 no.5
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    • pp.461-472
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    • 1997
  • This study was carried out to investigate the characteristics of chemical components and precipitation at Kimhae area from March, 1992 to June, 1994. The pH values, concentration of soluble ions($Cl^-$, $NO_2^-}$ $NO_3^-}$, $NO_4^{2-}$-, $PO_4^{3-}$. $F^-$, $Mg^{2+}$, $Ca^{2+}$, $Mn^{2+}$, $K^+) and non-soluble metals(Cr.Si. Zn, Pb, Cu, Fe, Mn, Mg, Ad. V. Cal were measured by pH meter, IC (ion Chromatography) and ICP(Inductively Coupled Plasma). The data were analyzed by the dally. hourly distribution characteristics of acidity and chemical components, as well as the correlation between them. The results are as follows. 1. The pH range of precipitation was from 3.45 to 6.80 in Kimhae area. and average value was pH 4.62 and main chemical components were $SO_4^{2-}$, $Cl^-$, $NO_3^-$. The highest pH value and concentration appeared in initial rain, which might result from urbanlzation and industrialization in this area and long term transportation from China. 2. The hourly correction distribution of main anions related to pH value In the rainwater showed $SO_4^{2-}$ > $NO_3^-$ > $Cl^-$. Hourly concentration of heavy metal and each ion was highly correlated with pH in the precipitation.

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Analysis of Long-term Oceanic Data for the Prediction of Undaria pinnatifida Aquaculture Production off the Coast of Busan (부산연안 미역(Undaria pinnatifida)양식 생산 예측을 위한 장기 해양자료 분석)

  • Han, In-Seong;Suh, Young-Sang;Lee, Joon-Soo
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.46 no.6
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    • pp.941-947
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    • 2013
  • To understand the relationship between various oceanographic factors and seaweed production, we examined the annual accumulated aquaculture production of Undaria pinnatifida with respect to water temperature, salinity, dissolved oxygen, current patterns and nutrients over 21 years (1990-2010) (this date range does not add up to over 21 years) along the coast of Busan, Korea. According to the results of the cross-correlation function, annual production of U. pinnatifida was closely related to the following conditions: low water temperature, low salinity, strong Tsushima Warm Current, and high concentrations of dissolved oxygen and nutrients. In this study, we also considered the Index of Oceanographic factors for U. pinnatifida (IOU) by computation of a simple equation. This index will be used for the prediction of U. pinnatifida aquaculture production off the coast of Busan.

RELATIONSHIP BETWEEN THE SURFACE ROUGHNESS PARAMETERS AND THE RADAR BACKSCATTER OF A BARE SURFACE

  • Oh, Yi-Sok;Hong, Jin-Yong
    • Proceedings of the KSRS Conference
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    • v.1
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    • pp.520-523
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    • 2006
  • Whereas it is well known that the surface roughness parameters, the RMS height and the correlation length, of a natural soil surface are underestimated with a short surface profile, it is not clear how much the underestimated surface parameters affect the backscattering coefficients of the surface for various incidence angles and polarizations. The backscattering coefficients of simulated and measured surface profiles are computed using the integral equation method (IEM) and analyzed in this paper to answer this question. It is shown that the RMS error of the backscattering coefficients between 5-m- and 1-m-long measured surface profiles is 1.7 dB for vv-polarization and 0.5 dB for hh-polarization at a medium range of incidence angle ($15^{\circ}{\leq}{\theta}{\leq}70^{\circ}$), while the surface roughness parameters are significantly reduced; from 2.4 cm to 1.5 cm for the RMS height s and from 35.1 cm to 10.0 cm for the autocorrelation length l. This result is verified with numerous simulations with various roughness conditions and various wavelengths.

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The sparse vector autoregressive model for PM10 in Korea (희박 벡터자기상관회귀 모형을 이용한 한국의 미세먼지 분석)

  • Lee, Wonseok;Baek, Changryong
    • Journal of the Korean Data and Information Science Society
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    • v.25 no.4
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    • pp.807-817
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    • 2014
  • This paper considers multivariate time series modelling of PM10 data in Korea collected from 2008 to 2011. We consider both temporal and spatial dependencies of PM10 by applying the sparse vector autoregressive (sVAR) modelling proposed by Davis et al. (2013). It utilizes the partial spectral coherence to measure cross correlation between different regions, in turn provides the sparsity in the model while balancing the parsimony of model and the goodness of fit. It is also shown that sVAR performs better than usual vector autoregressive model (VAR) in forecasting.