• Title/Summary/Keyword: LSU (large subunit)

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Molecular and Morphological Confirmation of Three Undescribed Species of Mortierella from Korea

  • Nguyen, Thuong T.T.;Park, Se Won;Pangging, Monmi;Lee, Hyang Burm
    • Mycobiology
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    • v.47 no.1
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    • pp.31-39
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    • 2019
  • Three fungal isolates designated as CNUFC-YR329-1, CNUFC-PTS103-1, and CNUFC-PTS2-1 were discovered during a survey of fungal diversity of the order Mortierellales from freshwater and pine tree rhizosphere soil samples in Korea. The strains were analyzed morphologically and phylogenetically based on the internal transcribed spacer (ITS) and large subunit (LSU) of ribosomal DNA gene sequences. Based on their morphology and phylogeny, the three isolates were identified as Mortierella elongata, M. horticola, and M. humilis, respectively. To the best of our knowledge, M. elongata, M. horticola, and M. humilis, belonging to an undiscovered taxon, have not been previously described in Korea.

Six Newly Recorded Fungal Taxa from Freshwater Niche in Korea

  • Lim, Hyo Jin;Nguyen, Thuong T.T;Lee, Hyang Burm
    • Mycobiology
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    • v.49 no.2
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    • pp.105-121
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    • 2021
  • Six interesting fungal strains were isolated during a survey of fungal diversity associated with freshwater; these strains were designated as CNUFC YJW2-22, CNUFC MSW11-6-2, CNUFC HRS5-3, CNUFC MSW242-6, CNUFC DMW2-2, and CNUFC CPWS-1. Based on a polyphasic approach including phylogenetic analyses of internal transcribed space (ITS), large subunit (LSU), beta-tubulin (BenA), and calmodulin (CaM) gene sequences, morphological analyses, the six strains were found to be identical to Acremonium guillematii, Cadophora novi-eboraci, Lectera nordwiniana, Mycoarthris corallina, Talaromyces siamensis, and Tetracladium globosum, respectively. To our knowledge, these are the first records of the rare Lectera, Mycoarthris, and Tetracladium genera in Korea, and the first reports of A. guillematii, C. novi-eboraci, L. nordwiniana, M. corallina, T. siamensis, and Te. globosum in a freshwater environment.

Puccinia klugkistiana, a Rust Fungus Occurring on Cleistogenes hackelii in Korea

  • Lee, Jae-Sung;Choi, Young-Joon;Choi, In-Young;Lee, Chong-Kyu;Shin, Hyeon-Dong
    • The Korean Journal of Mycology
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    • v.49 no.2
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    • pp.253-257
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    • 2021
  • Rust samples at both uredinial and telial stages were collected from Cleistogenes hackelii (Poaceae) in 2017 and 2019 in Korea. Based on the morphological examination and molecular phylogenetic analyses of the internal transcribed spacer (ITS) and large subunit (LSU) rDNA, it was identified as Puccinia klugkistiana. This rust at aecial stage has previously been recorded on Ligustrum japonicum (Oleaceae) in Korea. Puccinia diplachnicola has been previously recorded on C. hackelii in Korea; however, it is believed to be unrelated to the rust collected in the present study. Conclusively, this is the first study to report P. klugkistiana occurrence on C. hackelii in Korea.

Identification and Pathogenicity of Neophysopella vitis Causing Rust Disease on Meliosma myriantha in Korea

  • Dong Hwan Na;Jae Sung Lee;Young-Joon Choi;Ji-Hyun Park;Hyeon-Dong Shin
    • Research in Plant Disease
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    • v.29 no.3
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    • pp.299-303
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    • 2023
  • Rust symptoms on Meliosma myriantha trees have been noticed during disease surveys in Korea since 2010, with a high disease incidence frequently surpassing 90%. The causal fungus of the rust disease was identified as Neophysopella vitis based on the morphological investigation and molecular sequence analysis of the internal transcribed spacer (ITS) and large subunit (LSU) rDNA regions. This is the first report of rust disease caused by N. vitis on M. myriantha in Korea. A pathogenicity assay proved that M. myriantha serves as the aecial host of N. vitis as spermogonia and aeciospores were produced, which can infect the two uredinial hosts, Boston ivy (Parthenocissus tricuspidata) and Virginia creeper (Parthenocissus quinquefolia).

Mycena subpiligera sp. nov., a Symbiotic Species from China Associated with the Seed Germination of Gastrodia elata

  • Li-na Liu;Guo-ying Zhou;Ai-rong Shen;Bao-ming Shen;Yun Tan;Zhu-ming Tan
    • Mycobiology
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    • v.50 no.5
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    • pp.294-301
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    • 2022
  • Mycena subpiligera, a new taxon in sect. Fragilipedes that can strongly enhance the germination efficiency of Gastrodia elata seeds, was discovered in subtropical areas of China. As revealed by a morphological comparison with related Mycena species as well as maximum likelihood (ML) and Bayesian phylogenetic analyses based on sequences of the internal transcribed spacer (ITS) and the large subunit (LSU) regions of nuclear ribosomal RNA, the new taxon can be distinguished from phenotypically similar and phylogenetically related species. Optimal cultural conditions for M. subpiligera basidiomata are reported, and the germination rate of the new species is compared with that of M. citrinomarginata.

Podospora leporina (Podosporaceae): An Unrecorded Endophytic Fungus Isolated from Cypripedium guttatum

  • Ju-Kyeong Eo;Juo Choi;Seung Won Lee;Nam Young Kim
    • The Korean Journal of Mycology
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    • v.50 no.4
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    • pp.361-365
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    • 2022
  • Here, Podospora leporina was isolated and cultured from Cypripedium guttatum Sw. (spotted lady's slipper), which was designated as an endangered wildlife class 1 by the Ministry of Environment. Further, Podospora sp., which is found in Calanthe discolor Lindl. (Japanese hardy orchid) root is recorded as an endophytic fungus in Jeju Island, Korea. However, there is no existing record of Podospora spp. Thus, in this study, we analyzed the morphological characteristics and two molecular markers, internal transcribed spacer (ITS) and large ribosomal subunit (LSU), of P. leporina and compared these data with other relative species. Consequently, this endophytic fungal species was confirmed as an unrecorded species in Korea, so we presented cultural characteristics and microstructures, such as the conidia of P. leporina.

Phylogenetic Relationships of the Mutualistic Fungi Associated with Macrotermes subhyalinus in Oman

  • Hilal S. AlShamakhi;Abdullah M. Al-Sadi;Lyn G. Cook
    • Mycobiology
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    • v.51 no.5
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    • pp.281-287
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    • 2023
  • The symbiotic association between fungus-gardening termites Macrotermes and its fungal symbiont has a moderate degree of specificity-although the symbiotic fungi (Termitomyces) form a monophyletic clade, there is not a one-to-one association between termite species and their fungus-garden associates. Here, we aim to determine the origin and phylogenetic relationships of Termitomyces in Oman. We used sequences of the internal transcribed spacer region (ITS) and the nuclear large subunit ribosomal RNA (LSU rRNA, 25S) gene and analyzed these with sequences of Termitomyces from other geographic areas. We find no evidence for more than a single colonization of Oman by Termitomyces. Unexpectedly, we find Termitomyces in Oman is most closely related to the symbiont of M. subhyalinus in West Africa rather than to those of geographically closer populations in East Africa.

Newly Recorded Macrofungi from Taebaeksan National Park in Korea

  • Jae Young Park;Jin Sung Lee;Minkyeong Kim;Hyun Lee;Changmu Kim;Nam Kyu Kim
    • The Korean Journal of Mycology
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    • v.51 no.4
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    • pp.313-334
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    • 2023
  • Mt. Taebaeksan extends from Gangwon-do Province (Taebaek-si, Youngwon-gu, and Jeongseon-gun) to Gyeongsangbuk-do Province (Bongwha-gun), South Korea. Indigenous fungi present in the park were investigated between 2019 and 2022. All collected specimens were identified to the species level based on their morphological characteristics and molecular phylogenetic analysis using sequences from the internal transcribed spacer (ITS) and large subunit (LSU) of ribosomal DNA. Among them, 17 species-Cyanosporus bifarius, Dacryobolus angiospermarum, Entoloma sericeum, Flammulina rossica, Fuscopostia leucomallella, Homophron helvolescens, Hygrophorus queletii, Hymenochaete huangshanensis, Inocybe albodiscoides, Lactarius fulvihirtipes, Lepiota ignivolvata, Physisporinus eminens, Ramaria gracilis, Russula albolutea, Russula cremicolor, Stropharia lignicola, and Tengioboletus subglutinosus-were newly recorded macromycota in Korea.

Apiospora pseudosinensis (Apiosporaceae): an Unrecorded Endophytic Fungus Isolated from Pseudosasa japonica

  • Ju-Kyeong Eo;Jae-Eui Cha;Ahn-Heum Eom
    • The Korean Journal of Mycology
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    • v.51 no.4
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    • pp.441-446
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    • 2023
  • Bamboo is host to diverse range of fungi, however, research on bambusicolous fungi remains insignificant in Korea. The genus Apiospora is prevalent in various environments, particularly as endophytic fungi in Poaceae, to which bamboo belongs. In this study, endophytic fungi were isolated from stems of Pseudosasa japonica collected from Gongjusi, Korea. To identify these endophytic fungi, we observed morphological characteristics and conducted phylogenetic analysis using internal transcribed spacer (ITS), large subunit ribosomal DNA (LSU), and β-tubulin (TUB2) DNA, identifying and describing an unrecorded fungus, Apiospora pseudosinensis.

Inhibitory Effects of Aureobasidium pullulans MHAU2101 Isolated from Domestic Pear Blossom Against Fire Blight (국내 배나무 꽃에서 분리한 Aureobasidium pullulans MHAU2101의 화상병 발생 억제 효과)

  • Hyeonseok Oh;Hyo-Won Choi;Yong Hwan Lee;Seung Yeup Lee;Mi-Hyun Lee;Sang-Keun Oh
    • The Korean Journal of Mycology
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    • v.50 no.4
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    • pp.331-341
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    • 2022
  • This study was conducted to identify yeast species isolated from domestic pear blossom through gene sequencing and analysis of morphological characteristics, and to confirm specific yeast species inhibitory effects toward fire blight in immature apples, pears, and crab apple blossoms. Yeast morphological characteristics were consistent with the known characteristics of Aureobasidium pullulans. Nucleotide sequencing of the D1/D2 region of large-subunit (LSU) 26S ribosomal DNA and the internal transcribed spacer (ITS) region confirmed its identity as A. pullulans (MHAU2101). Inoculation of immature fruits with A. pullulans MHAU2101 before exposure to Erwinia amylovora prevented fire blight symptoms in apples and pears. A. pullulans MHAU2101 treated crab apple blossoms had a significantly lower flower infection rate than untreated blossoms, revealing 64% of the potency of streptomycin. The A. pullulans MHAU2101 treated group also displayed lower E. amylovora density in both pistil and hypanthium compared to the untreated group, especially in the hypanthium. This study confirms that A. pullulans MHAU2101 isolated from domestic pear blossom can effectively suppress the onset of fire blight.