• Title/Summary/Keyword: Korean endemic genus

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Intraspecific variation and geographic study of Lonicera insularis (Caprifoliaceae) based on chloroplast DNA sequences (엽록체 DNA를 이용한 섬괴불나무(Lonicera insularis Nakai)의 종내변이 및 지리학적 연구)

  • Jeong, Keum Seon;Kim, Mi Sun;Lee, Woong;Pak, Jae-Hong
    • Korean Journal of Plant Taxonomy
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    • v.44 no.3
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    • pp.202-207
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    • 2014
  • Lonicera insularis Nakai (Caprifoliaceae) is Korean endemic plant that lives along the shore of Ulleungdo and Dokdo. The aim of this study is to construct a phylogenetic relationship within six species (L.maackii, L.chrysantha, L.subsessilis, L. harai, L. morrowii) of genus Lonicera L. and Wigela subsessilis as outgroup and intraspecific variation of L. insularis using chloroplast DNA five regions sequences. Sequence analysis revealed that both L. insularis and L. morrowii showed complete homologies in the intergenic regions of trnL-trnF, trnS-trnG, psbM-trnD and matK coding region. However, sequence in the petN-psbM intergenic region showed a single nucleotide difference between both species, thus we designated them as CP01 and CP02. The plants having CP01 are prevalent in the Ulleungdo and Dokdo, while L. insularis and L. morrowii from Ulleungdo and of Dokdo, and Japan have CP02. This confirmed the existence of two cp DNA lineages with different geographical distributions. We can infer the allopatric speciation by geographical barrier. The result will provide the important basal data to study speciation and specie evolution of ocean islands such as Ulleungdo and Dokdo.

Human Infections with Spirometra decipiens Plerocercoids Identified by Morphologic and Genetic Analyses in Korea

  • Jeon, Hyeong-Kyu;Park, Hansol;Lee, Dongmin;Choe, Seongjun;Kim, Kyu-Heon;Huh, Sun;Sohn, Woon-Mok;Chai, Jong-Yil;Eom, Keeseon S.
    • Parasites, Hosts and Diseases
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    • v.53 no.3
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    • pp.299-305
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    • 2015
  • Tapeworms of the genus Spirometra are pseudophyllidean cestodes endemic in Korea. At present, it is unclear which Spirometra species are responsible for causing human infections, and little information is available on the epidemiological profiles of Spirometra species infecting humans in Korea. Between 1979 and 2009, a total of 50 spargana from human patients and 2 adult specimens obtained from experimentally infected carnivorous animals were analyzed according to genetic and taxonomic criteria and classified as Spirometra erinaceieuropaei or Spirometra decipiens depending on the morphology. Morphologically, S. erinaceieuropaei and S. decipiens are different in that the spirally coiled uterus in S. erinaceieuropaei has 5-7 complete coils, while in S. decipiens it has only 4.5 coils. In addition, there is a 9.3% (146/1,566) sequence different between S. erinaceieuropaei and S. decipiens in the cox1 gene. Partial cox1 sequences (390 bp) from 35 Korean isolates showed 99.4% (388/390) similarity with the reference sequence of S. erinaceieuropaei from Korea (G1724; GenBank KJ599680) and an additional 15 Korean isolates revealed 99.2% (387/390) similarity with the reference sequences of S. decipiens from Korea (G1657; GenBank KJ599679). Based on morphologic and molecular databases, the estimated population ratio of S. erinaceieuropaei to S. decipiens was 35: 15. Our results indicate that both S. erinaceieuropaei and S. decipiens found in Korea infect humans, with S. erinaceieuropaei being 2 times more prevalent than S. decipiens. This study is the first to report human sparganosis caused by S. decipiens in humans in Korea.

Conservation of an endangered Corylopsis corona Uyeki in and ex situ and Development of cooperative model within local community I. Study for a Characteristic of Distribution Pattern in Corylopsis coreana $U_{YEKI}$ (보호종인 히어리의 자생지내외 보전과 지역사회 협력 모델 개발 I. 히어리 분포지 특성에 관한 연구)

  • 임동옥;황인천;정흥락;유윤미
    • Proceedings of the Korean Society of Environment and Ecology Conference
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    • 2005.04a
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    • pp.85-101
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    • 2005
  • This study was carried out a field survey and review articles to investigate a characteristic of the distribution pattern in Korean endemic Corylopsis coreana. Distribution of Corylopsis coreana was found from Boseung-gun, Gwangyang-si, Suncheon- si, Jeumanl-myeon Goheung-gun, Ganjeon-myeon Gurye-gun, Mt. Cheongwan Jangheung-gun, Nogodan Mt. Jiri in Jeollanam-do, Mt. Cheonhwang Namwon-si and Beamsagol and Banyabong Mt. Jiri, in Jeollabuk-do, Sancheong-gun, hadong-gun and Namhea-gun in Gyeongsangnam-do and Mt. Backun, Pocheon-si in Gyeonggi-do. Total flora in the distribution region of Coryloplsis coreana were recorded as 242 taxa; 70 families, 159 genus, 216 species, 22 varieties, 4 forma. Ratio of taxonomic categories was consisted of Pteridophyte $5.8\%$, Gymnosperm $3.7\%$, Dicotyledon $18.6\%$ and Monocotyledon $71.9\%$. Ratio of Life cycle styles was Annual $1.7\%$ and Perennial $98.3\%$. Ratio of growth habit was appeared to Herb $44.2\%$, Vine $12.4\%$, Shrub $17.8\%$ and Tree $25.6\%$. The distribution region of Corylopsis coreana found to typical type which distribute in N, NE or NE slope. The native Corylopsis coreana of Sinjeonri Sungju-eup in Jellanam-do appeared to a declining tendency which caused by influence of tree lager.

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Conservation of an Endangered Corylopsis coreana $U_{yeki}$ in and Ex Situ and Development of Cooperative Model within Local Community I. Study for a Characteristic of Distribution Pattern in Corylopsis coreana $U_{yeki}$ (보호종인 히어리의 자생지내외 보전과 지역사회 헙력 모델 개발 I. 히어리 분포지 특성에 관한 연구)

  • Lim Dong-Ok;Hwang In-Chun;Choung Heung-lak
    • Korean Journal of Environment and Ecology
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    • v.19 no.2
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    • pp.162-176
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    • 2005
  • This study was carried out as a field survey and a review of articles to investigate a characteristic of the distribution pattern in Korean endemic Corylopsis coreana. Distribution of Corylopsis coreana was found in Boseung-gun, Gwangyang-si, Suncheon-si, Jeumam-myeon Goheung-gun, Ganjeon-myeon Gurye-gun, Mt, Cheongwan Jangheung-gun, Nogodan Mt. Jiri in Jeollanam-do, Mt. Cheonhwang Namwon-si and Beamsagol and Banyabong Mt. Jiri in Jeollabuk-do, Sancheong-gun, hadong-gun and Namhea-gun in Gyeongsangnam-do and Mt. Backun, Pocheon-si in Gyeonggi-do. Total flora in the distribution region of Coryloplsis coreana was recorded as 242 taxa; 70 families, 159 genus, 216 species, 22 varieties, 4 forma. Ratio of taxonomic categories was consisted of Pteridophyte $5.8\%$, Gymnosperm $3.7\%$, Dicotyledon $18.6\%$ and Monocotyledon $71.9\%$. Ratio of Life cycle styles was Annual $1.7\%$ and Perennial $93.3\%$. Ratio of growth habit was appeared to Herb $44.2\%$, Vine $12.4\%$, Shrub $17.8\%$ and Tree $25.6\%$. The distribution region of Corylopsis coreana found to typical type which distribute in N, NE or NW slope. The native Corylopsis coreana of Sinjeonri Sungju-eup in Jellanam-do appeared to have a declining tendency which was caused by influence of tree lager.

Freshwater Fish Fauna and Community Structure of the Small Streams in Bogil Island, Korea (보길도 소하천 담수어류상 및 군집구조)

  • Han, Jeong-Ho;Park, Chan-Seo;An, Kwang-Guk;Paek, Woon-Kee
    • Korean Journal of Environment and Ecology
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    • v.31 no.1
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    • pp.72-80
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    • 2017
  • Fish fauna and community structures in freshwater were analyzed in the streams (12 stations) of the Bogil Island from May to September 2015. Total numbers of the sampled species and genus (9 families) were 21 and 17, respectively. Gobiidae was the most dominant taxa, which accounted for 47.6% (10 species) of the total species, and the relative abundance, based on the number of individuals, was 60.4% (1,157 individuals). Subdominant families were three taxa of Cyprinidae (3 species; 500 ind.), Mugilidae (2 species; 168 ind.) and Mugilidae (2 species; 128 ind.). The dominant species, based on the relative abundance, was Rhynchocypris oxycephalus (20.7%) and the subdominant species were Gymnogobius urotaenia (19.5%), Leucopsarion petersii (17.2%) and Chelon haematocheilus (8.5%). These species were composed of upstream-resident fish as well as migratory fishes, so the streams of the Bogil Island had unique characteristics in the fish compositions. Based on all the species sampled, 9 species (42.9%) were primary freshwater fishes, 11 species (52.4%) were peripheral fishes and 1 species (4.8%) was amphidromous fish. Korean endemic species and exotic species were not found in the streams of Bogil Island. According to the analysis of fish community structure, species richness index and species diversity index were highest (1.831, 1.957) in the Site 8 and lowest in the Site 4. In the meantime, the dominance index was highestin the Site 4 (1.00) and lowest in theSite 8 (0.17).

Diversity and Ecological Importance of Foliicolous Lichens in Korea

  • Oh, Soon-Ok
    • 한국균학회소식:학술대회논문집
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    • 2014.05a
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    • pp.49-49
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    • 2014
  • South Korea is covered primarily by temperate vegetation; therefore, foliicolous lichens may not be expected to play an important role in its lichen flora. Indeed, more than 100 years after the first lichen record from South Korea reported by Hue, the paper "Pyrenocarpous lichens in Korea" published by Moon and Aptroot, reported on the presence of two foliicolous lichens, Strigula nemathora Mont, and S. smaragdula Fr., for the first time in South Korea. No detailed reports on foliicolous lichens have since been published in South Korea. In Japan, the neighboring country, approximately 83 foliicolous lichen species are distributed at the southernmost part under temperate to subtropical climatic conditions. However, a large number of foliicolous lichens, with many recent records, have been reported in neighboring countries like China and Taiwan. According to Thor et al., studies on foliicolous lichen flora of Asia are comparatively poor compared to those reported from America. There are six lichenogeographical regions: the Neotropics, Valdivia, Tethyan, African Paleotropics, eastern Paleotropics, and Neozelandic-Tasmanian, which are demarcated based on the known worldwide distribution pattern of foliicolous lichen flora. South Korea belongs to the eastern paleotropic region, where a higher number of local endemic foliicolous lichens have been reported. So far, there are a total of six known foliicolous lichen taxa from South Korea; S. concreta, S. macrocarpa, S. melanobapha, S. nemathora, S. smaragdula, and S. subelegans from Jeju Island. So far, the genus Strigula is the only known representative of the foliicolous lichen flora in South Korea. Among the recorded species, S. concreta, S. smaragdula, and S. subelegans are abundant and widespread. Japan, the closest area to Jeju Island, has the same distribution pattern of foliicolous lichens, with S. smaragdula, S. melanobapha, and S. subtilissima. Pollen studies conducted by Chung reported that changes in vegetation on Jeju Island, due mainly to deglacial warming and the influence of geographical change, resulted from sea-level rises. In general, all of the foliicolous lichens observed so far were restricted to the southernmost part of South Korea, particularly Jeju Island. Island might be influenced by its geographical setting. One reason could be the close dispersal distances of spores and vegetative propagules from areas such as the southern part of Japan and eastern part of China, where more foliicolous lichens can be found. Thor et al. also showed that the southern part of Japan harbors more foliicolous lichens than the northern part. Considering that China is close to Jeju Island, many foliicolous lichens, including S. concreta, S. macrocarpa, S. nemanthora, and S. smaragdula, have been reported from Yunnan province, the southernmost part of China. Geographically, this province is far away from Jeju Island. In other provinces, such as Shandong, Jiangsu, Shanghai, and Zhejiang, which are closer to Jeju Island, no foliicolous lichens have been recorded so far. Therefore, the chance of spores and propagules coming from such closer areas is questionable. Thus, the location of origin of ancestors of foliicolous lichens of South Korea and the time and means of their invasion of this island is controverisial. The current study would lead the way to finding answers to the above mentioned questions.

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A systematic study of Glechoma L. (Lamiaceae) based on micromorphological characters and nuclear ribosomal ITS sequences (미세구조학적 형질 및 핵 리보솜 DNA의 ITS 염기서열에 의한 긴병꽃풀속(꿀풀과)의 계통분류학적 연구)

  • Jang, Tae-Soo;Lee, Joongku;Hong, Suk-Pyo
    • Korean Journal of Plant Taxonomy
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    • v.44 no.1
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    • pp.22-32
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    • 2014
  • The petal and sepal micromorphology of five species of Glechoma (Lamiaceae) was investigated to evaluate their taxonomic significance, and a molecular phylogeny using the sequences of internal transcribed spacers (ITS) regions of nuclear ribosomal DNA was carried out to resolve their phylogenetic relationships. Stomatal complexes were mostly found in the inner and outer part of the sepal from all investigated taxa, and the size length of the guard cell was variable among the taxa. Five types of trichomes (uni-cellular non-glandular trichome, multi-cellular non-glandular trichome, short-stalked capitate glandular trichome, long-stalked capitate glandular trichome, and peltate glandular trichome) were variable among the taxa as well as their distribution and density. In molecular phylogenetic studies, the genus Glechoma was composed of three geographically distinct major monophyletic groups (Europe-U.S.A., China-Korea, Japan). G. longituba in Korea and China formed well-supported monophyletic group. G. hederacea in Europe and U.S.A. formed a monophyletic and well-supported clade with G. sardoa, which are endemic species in Italy, with G. hirsuta falling as a sister to this clade. However, G. grandis did not form any phylogenetic relationships with the remaining taxa. The ITS analyses provided taxonomic boundaries of taxa in Glechoma although the petal and sepal micromorphological characters provided weak evidences of the systematic value. As further studies, incorporating more DNA regions to the matrix including other additional morphological analysis will be significant to provide clearer taxonomic structure in Glechoma.

The Flora of Mt. Hwang-ak and Jikjisa, Temple Forest in Baekdudaegan (백두대간의 사찰림 황악산과 직지사의 식물상)

  • Son, Yonghwan;Park, Sunghyuk;Seo, Hanna;Park, Wangeun;Son, Hojun
    • Korean Journal of Plant Resources
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    • v.34 no.2
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    • pp.115-143
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    • 2021
  • Mt. Hwang-ak, as a temple forest belongs to Baekdudaegan. flora investigation was conducted to better know of current natural environment. At the same time, For the understanding of planted plants which is in the traditional Korea buddhism temple for landscape, research on Jikji temple had taken place during 2019 April to October with 12 times. As a result, the list of plants at Mt. Hwang-ak was classified as a total of 534 taxa comprising of 96 families, 312 genus, 462 species, 4 subspecies, 59 varieties, 9 forma. This listed plants could be classified as 4 categories by each standard. the listed plants were 14 species of Korean endemic plants, 13 species of Rare plants data book in korea, 34 species of Invasive Alien Plants in South Korea with 10% of Urbanization Ratio and 6% of Naturalization Ratio respectively, 167 species of List of Medicinal Resources Plants in Korea. In the Temple of Jikji, could find 81 species of planted plants that widely distributed all around the temple for landscape. Compared to other temple, We could observed 51% of species were overlapping, Among them, 9% of species overlapping with more than three temples.

Comparison of the bioactive compounds and anti-inflammatory effects found in different flower colors from Abeliophyllum distichum Nakai (미선나무 꽃 색에 따른 생리활성 화합물 및 항염증 활성 비교)

  • Jang, Tae-Won;Choi, Ji-Soo;Han, So-Yeon;Park, Hye-Jeong;Lee, Da-Yoon;Min, Young-Sil;Park, Jae-Ho
    • Journal of Applied Biological Chemistry
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    • v.65 no.3
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    • pp.203-213
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    • 2022
  • Abeliophyllum distichum (A. distichum, Korean endemic plant) is one genus and one species in the Oleaceae family. According to the color variation of petals and calyx, A. distichum is classified as A. distichum (white flower), A. distichum for. lilacinum (pink flowers), A. distichum for. eburneum (ivory flowers), and Okhwang 1 (golden flowers). In previous studies, bioactivities (antioxidant, anti-inflammatory, and anti-cancer) of A. distichum have been reported. We conducted a comparison of the differences in bioactive compounds and the anti-inflammatory effects on macrophages among four flowers of A. distichum (FAD). The identification and quantification of glycosides were analyzed by HPLC/PDA and LCMS. These results were shown FAD has rutin, hirsutrin, and acteoside. Antioxidant activity of FAD significantly decreased reactive oxygen species. In addition, FAD reduced the expression of pro-inflammatory mediators (nitric oxide, iNOS, and COX-2) in lipopolysaccharide-induced RAW 264.7 cells. For further study, we investigated the regulation of nuclear factor kappa B (NF-κB) and mitogen-activated protein kinase (MAPK) signaling pathways. In conclusion, FAD may exert anti-inflammatory effects by suppressing inflammatory mediators via regulations of NF-κB and MAPK signaling pathways. Therefore, these findings suggest that FAD is a potential resource as a preventative or therapeutic agent for inflammation.

Molecular Authentication and Phylogenetic Relationship of Bupleurum Species by the rDNA-ITS Sequences (rDNA-ITS 염기서열 분석을 통한 시호 종 감별용 유전자 마커 개발 및 유연관계 분석)

  • Moon, Byeong-Cheol;Choo, Byeong-Kil;Ji, Yun-I;Yoon, Tae-Sook;Lee, A-Young;Cheon, Myeong-Sook;Kim, Bo-Bae;Kim, Ho-Kyoung
    • The Korea Journal of Herbology
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    • v.24 no.3
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    • pp.59-68
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    • 2009
  • Objectives : Bupleuri Radix (Siho) is prescribed as the root of different Bupleurum species on the pharmarcopoeia in Korea and China. Moreover, other species and varieties of the genus Bupleurum have been also distributed on the herbal market as Bupleuri Radix. However, due to the morphological similarity and frequent occurrence of intermediate forms, the correct identification of this radix is very difficult. To develop a reliable method for correct identification and improving the quality standards of official Bupleuri Radix, we analyzed sequences of the ribosomal RNA gene and internal transcribed spacer (rDNA-ITS) region. Methods : PCR amplification of rDNA-ITS region was performed using ITS1 and ITS4 primer from 6 Bupleurum species and 1 variety, B. falcatum L. (Siho), an improved breed of B. falcatum L. (Samdo-Siho), B. chinense DC. (Buk-Siho), B. scorzonerifolium Willd. (Nam-Siho), B. longiadiatum Turcz. (Gae-Siho), B. euphorbiodes Nakai (Deungdae-Siho) and B. latissimum Nakai (Seom-Siho), and nucleotide sequence was determined after sub-cloning into the pGEM-Teasy vector. Authentic marker nucleotides were estimated by the analysis of ClastalW using entire rDNA-ITS sequence of three samples per species. Results : In comparative analysis of the rDNA-ITS sequences, we found specific nucleotides to distinguish Korean (B. falcatum L. and its variety) and Chinese official species (B. chinense DC. and B. scorzonerifolium Willd.) from others at positions 411 and 447, and positions 89, 101, 415 and 599, respectively. Futhermore, we also found nucleotide indels (insertion and/or deletion) and substitutions to identify each of different Bupleurum species, 2 positions for B. falcatum L. and its variety, 6 positions for B. chinense DC., 49 positions for B. scorzonerifolium Willd., 8 positions for B. euphorbioides Nakai, 7 positions for B. longiradiatum Nakai and 9 positions for B. latissimum Nakai. These sequence differences at corresponding positions are avaliable nucleotide markers to determine the botanical origins of Bupleuri Radix. Moreover, we confirmed the phylogenetic relationship of B. latissimum Nakai, a Korean endemic speices, among Bupleurum species based on the rDNA-ITS sequence. Conclusions : These marker nucleotides would be useful to identify the official herbal medicines by the providing of definitive information that can identify each plant species and distinguish it from unauthentic adulterant Bupleurum species.