• 제목/요약/키워드: K_{cat}/K_m$

검색결과 394건 처리시간 0.026초

B16F10 Murine Melanoma Cell에서 Myricetin이 항산화효소의 m-RNA 발현에 미치는 영향 (Effect of Myricetin on mRNA Expression of Different Antioxidant Enzymes in B16F10 Murine Melanoma Cells)

  • 유지선;김안근
    • 약학회지
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    • 제49권1호
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    • pp.86-91
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    • 2005
  • Flavonoids are class of polyphenolic compounds widely distributed in the plant kingdom, which display a variety of biological activities, including antiviral, antithrombotic, antiinflammatory, antihistaminic, antioxidant and free-radica 1 scavenging abilities. The antioxidant enzyme (AOE) system plays an important role in the defense against oxidative stress insults. To determine whether flavonoid, myricetin can exert antioxidative effects not only directly by modulating the AOE system but also scavenging free radical, we investigated the influence of the flavonoid myricetin on cell viability, different antioxidant enzyme activities, ROS level and the expression of different antioxidant emzyme in B16F10 murine melanoma cells. Myricetin in a concentration range from 6.25 to $50\;{\mu}M$ decreased superoxide dismutase (SOD) and glutathione peroxidase (GPx) enzyme activities, but catalase (CAT) activity was increased. In the myricetin-treated group, ROS levels were decreased dose-dependently. Antioxidant enzyme expression was measured by RT-PCR. Myricetin treatment of B16F10 cells increased catalase expression. Expression levels of copper zinc superoxide dismutase (CuZn SOD) were not affected by exposure of myricetin. Manganese superoxide dismutase (Mn SOD) and GPx expression levels decreased slightly after myricetin treatment. In conclusion, the antioxidant capacity of myricetin was due to CAT and free-radical scavenging.

Biochemical Characterization of Recombinant L-Asparaginase (AnsA) from Rhizobium etli, a Member of an Increasing Rhizobial-Type Family of L-Asparaginases

  • Moreno-Enriquez, Angelica;Evangelista-Martinez, Zahaed;Gonzalez-Mondragon, Edith G.;Calderon-Flores, Arturo;Arreguin, Roberto;Perez-Rueda, Ernesto;Huerta-Saquero, Alejandro
    • Journal of Microbiology and Biotechnology
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    • 제22권3호
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    • pp.292-300
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    • 2012
  • We report the expression, purification, and characterization of L-asparaginase (AnsA) from Rhizobium etli. The enzyme was purified to homogeneity in a single-step procedure involving affinity chromatography, and the kinetic parameters $K_m$, $V_{max}$, and $k_{cat}$ for L-asparagine were determined. The enzymatic activity in the presence of a number of substrates and metal ions was investigated. The molecular mass of the enzyme was 47 kDa by SDS-PAGE. The enzyme showed a maximal activity at $50^{\circ}C$, but the optimal temperature of activity was $37^{\circ}C$. It also showed maximal and optimal activities at pH 9.0. The values of $K_m$, $V_{max}$, $k_{cat}$, and $k_{cat}/K_m$ were $8.9{\pm}0.967{\times}10^{-3}$ M, $128{\pm}2.8$ U/mg protein, $106{\pm}2s^{-1}$, and $1.2{\pm}0.105{\times}10^4M^{-1}s^{-1}$, respectively. The L-asparaginase activity was reduced in the presence of $Mn^{2+}$, $Zn^{2+}$, $Ca^{2+}$, and $Mg^{2+}$ metal ions for about 52% to 31%. In addition, we found that $NH_4{^+}$, L-Asp, D-Asn, and ${\beta}$-aspartyl-hydroxamate in the reaction buffer reduced the activity of the enzyme, whereas L-Gln did not modify its enzymatic activity. This is the first report on the expression and characterization of the L-asparaginase (AnsA) from R. etli. Phylogenetic analysis of asparaginases reveals an increasing group of known sequences of the Rhizobial-type asparaginase II family.

Functional Characterization of Drosophila melanogaster CYP6A8 Fatty Acid Hydroxylase

  • Sang-A Lee;Vitchan Kim;Byoungyun Choi;Hyein Lee;Young-Jin Chun;Kyoung Sang Cho;Donghak Kim
    • Biomolecules & Therapeutics
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    • 제31권1호
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    • pp.82-88
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    • 2023
  • Genomic analysis indicated that the genome of Drosophila melanogaster contains more than 80 cytochrome P450 genes. To date, the enzymatic activity of these P450s has not been extensively studied. Here, the biochemical properties of CYP6A8 were characterized. CYP6A8 was cloned into the pCW vector, and its recombinant enzyme was expressed in Escherichia coli and purified using Ni2+-nitrilotriacetate affinity chromatography. Its expression level was approximately 130 nmol per liter of culture. Purified CYP6A8 exhibited a low-spin state in the absolute spectra of the ferric forms. Binding titration analysis indicated that lauric acid and capric acid produced type I spectral changes, with Kd values 28 ± 4 and 144 ± 20 µM, respectively. Ultra-performance liquid chromatography-mass spectrometry analysis showed that the oxidation reaction of lauric acid produced (ω-1)-hydroxylated lauric acid as a major product and ω-hydroxy-lauric acid as a minor product. Steady-state kinetic analysis of lauric acid hydroxylation yielded a kcat value of 0.038 ± 0.002 min-1 and a Km value of 10 ± 2 µM. In addition, capric acid hydroxylation of CYP6A8 yielded kinetic parameters with a kcat value of 0.135 ± 0.007 min-1 and a Km value of 21 ± 4 µM. Because of the importance of various lipids as carbon sources, the metabolic analysis of fatty acids using CYP6A8 in this study can provide an understanding of the biochemical roles of P450 enzymes in many insects, including Drosophila melanogaster.

Cloning, Expression, and Characterization of a Cold-Adapted Shikimate Kinase from the Psychrophilic Bacterium Colwellia psychrerythraea 34H

  • Nugroho, Wahyu Sri Kunto;Kim, Dong-Woo;Han, Jong-Cheol;Hur, Young Baek;Nam, Soo-Wan;Kim, Hak Jun
    • Journal of Microbiology and Biotechnology
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    • 제26권12호
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    • pp.2087-2097
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    • 2016
  • Most cold-adapted enzymes possess higher $K_m$ and $k_{cat}$ values than those of their mesophilic counterparts to maximize the reaction rate. This characteristic is often ascribed to a high structural flexibility and improved dynamics in the active site. However, this may be less convincing to cold-adapted metabolic enzymes, which work at substrate concentrations near $K_m$. In this respect, cold adaptation of a shikimate kinase (SK) in the shikimate pathway from psychrophilic Colwellia psychrerythraea (CpSK) was characterized by comparing it with a mesophilic Escherichia coli homolog (EcSK). The optimum temperatures for CpSK and EcSK activity were approximately $30^{\circ}C$ and $40^{\circ}C$, respectively. The melting points were $33^{\circ}C$ and $45^{\circ}C$ for CpSK and EcSK, respectively. The ${\Delta}G_{H_2O}$ (denaturation in the absence of denaturing agent) values were 3.94 and 5.74 kcal/mol for CpSK and EcSK, respectively. These results indicated that CpSK was a cold-adapted enzyme. However, contrary to typical kinetic data, CpSK had a lower $K_m$ for its substrate shikimate than most mesophilic SKs, and the $k_{cat}$ was not increased. This observation suggested that CpSK may have evolved to exhibit increased substrate affinity at low intracellular concentrations of shikimate in the cold environment. Sequence analysis and homology modeling also showed that some important salt bridges were lost in CpSK, and higher Arg residues around critical Arg 140 seemed to increase flexibility for catalysis. Taken together, these data demonstrate that CpSK exhibits characteristics of cold adaptation with unusual kinetic parameters, which may provide important insights into the cold adaptation of metabolic enzymes.

Liquid Crystal Droplet Patterns to Monitor Catalase Activity at Femtomolar Levels

  • Yoon, Stephanie;Jang, Chang-Hyun
    • Bulletin of the Korean Chemical Society
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    • 제35권9호
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    • pp.2704-2710
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    • 2014
  • Catalase (CAT) decomposes hydrogen peroxide that is toxic to the body. In this study, simple and sensitive detector has been developed for observing catalase activity using liquid crystal droplet system. Microscale LC droplet patterns are formed by spreading aldehyde-doped nematic liquid crystal on pre-treated glass slides. When hydrogen peroxide is added, aldehyde is oxidized and amphiphiles are formed. Dodecanoates cause the pattern to transit from bright to dark as they self-assemble to form a carboxyalte monolayer at the interface. When a drop of pre-incubated CAT and hydrogen peroxide mixture is placed onto the pattern, bright fan-shape is observed. This planar optical appearance indicates that catalase has decomposed hydrogen peroxide. Compared to the detectors that have been previously developed, this system is more sensitive with detection limit of 1fM. This research suggests further studies to be on LC droplet patterning to develop highly sensitive and methodologically simple sensors for various chemicals.

Western blot analysis of stray cat sera against Toxoplasma gondii and the diagnostic availability of monoclonal antibodies in sandwich-ELISA

  • Sohn, Woon-Mok;Nam, Ho-Woo
    • Parasites, Hosts and Diseases
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    • 제37권4호
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    • pp.249-256
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    • 1999
  • A total of 198 sera from stray cats was assayed against Toxoplasma gondii antigen by western blot. Out of 198 sera assayed, 26 sera (13.1%) showed typical blot patterns against T gondii. When spotted by ELISA absorbance and indirect latex agglutination lest (ILAT) titer, all 26 cases were distributed over the cut-off value of ELISA whereas 24 cases (92.3%) were in the positive range of 1:32 or higher and 2 cases in negative range by ILAT. Among western blot negative 172 sera, 162 cases were negative in both ILAT and ELISA while 10 cases were reactive falsely such that three cases were ILAT positive with 1:32 titer and 9 cases were ELISA positive (2 cases overlapped). These 10 cases reacted peculiarly without typical binding pattern in Western blot. Sandwich-ELISA was performed with monoclonal antibodies (mAbs) of Tg563 (30 kDa, SAG 1), Tg505 (22 kDa, SAG2), Tg605 (43 kDa, SAG3), Tg556 (28 kDa, GRA2), Tg737 (32 kDa, GRA6). Tg695 (66 kDa, ROP2), Tg786 (42 kDa, ROP6), and Tg621 (32 kDa, anonymous but cytosolic) clone, respectively. All western blot-positive cases were in the positive range and negative cases in the negative range clearly. Among the 10 false reactive cases, 3 cases were in the positive range with one or more mAbs. All mAbs used in this study were confirmed to be specific to T. gondii infection as a standardized sandwich-ELISA to differentiate it from other pathogens.

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인간 HepG2 Cell에서 항산화 효소의 mRNA 발현에 대한 잔대 에틸아세테이트 추출물 효과 (Effects of Adenophora triphylla Ethylacetate Extract on mRNA Levels of Antioxidant Enzymes in Human HepG2 Cells)

  • 최현진;김수현;오현택;정미자;최승필;함승시
    • 한국식품영양과학회지
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    • 제37권10호
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    • pp.1238-1243
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    • 2008
  • 잔대 뿌리는 우리나라에서 예로부터 민간약으로 이용되어 오고 있다. 본 연구에서는 인간 간세포인 HepG2에 잔대 뿌리의 에틸아세테이트 추출물을 처리했을 때 sodium nitroprusside(SNP)에 의해 유도된 세포 독성 및 항산화 유전자 발현에 미치는 영향력을 알아보았다. 먼저, 잔대 에틸아세테이트 추출물이 NO에 의해 유도된 세포 사멸을 저해할 수 있는지를 알아보기 위하여 HepG2 세포에 잔대 에틸아세테이트 추출물(각각 50과 100 $\mu$g/mL)을 24시간 먼저 처리한 후 세포내에서 NO을 생성시킬 수 있는 0.5 mM SNP를 처리하였다. NO에 의한 세포독성이 에틸아세테이트 추출물에 의해 저해되었다는 것을 mitochondrial dehydrogenase 활성을 알아보는 MTT assay를 실시하여 알아보았다. 더하여 우리는 잔대 에틸아세테이트 추출물이 세포내 항산화 방어 시스템인 Cu,Zn superoxide dismutase(SOD 1), Mn SOD(SOD 2), glutathione peroxidase(GPx), catalase와 glutathione metabolism과 관련되어져 있는 glutathione reductase(GR), $\gamma$-glutamyl-cystein synthetase(GCS), glutathione-S-transferase(GST), $\gamma$-glutamyltranspeptidase($\gamma$-GT), glucose-6-phosphate dehydrogenase(G6PD)의 mRNA 발현에 미치는 영향을 RT-PCR로 알아보았다. CAT, GCS 그리고 G6PD mRNA 수준이 잔대 에틸아세테이트 추출물 처리 후 증가하였으나, SOD 1, SOD 2, GPx, GST 그리고 $\gamma$-GT mRNA 수준은 변화지 않았다. 따라서 잔대 에틸아세테이트 추출물이 간접적 항산화 효과가 있고, 이들 효과는 아마 CAT, GCS, GR 그리고 G6PD 유전자 발현 증가에 의한 것이라고 추정되었다.

혈합육어 Trypsin의 효소적 성질에 대한 반응속도론적 해석 (Kinetic Analyses for Enzymatic Properties of Trypsins Purified from Dark-Fleshed Fish)

  • 조득문;허민수;김형락;김두상;변재형
    • 한국수산과학회지
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    • 제29권1호
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    • pp.64-70
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    • 1996
  • 멸치, 고등어, 황다랭이 및 날개다랭이의 혈합육어에서 정제된 trypsin을 시료로 하여 각각의 BAPNA기질에 대한 반응속도와 그 관련 성질들을 분석 검토하였다. 4종의 혈합육어에서 정제된 trypsin의 Km'와 $k_{cat}$는 멸치 trypsin이 각각 $49.3{\mu}M$$90.9min^{-1}$, 고등어 trypsin A는 $53.7{\mu}M$$61.2min^{-1}$, 고등어 trypsin B는 $96.5{\mu}M$ $76.6min^{-1}$, 황다랭이 trypsin은 $62.8{\mu}M$$46.4min^{-1}$, 그리고 날개다랭이 trypsin은 $98.3{\mu}M$$47.68min^{-1}$ 이었다. TLCK에 대한 $K_i$, 값은 멸치 trypsin이$20.90{\mu}M$, 고등어 trypsin A가 $2.86{\mu}M$, 고등어 trypsin B가 $3.90{\mu}M$, 황다랭이 trypsin이 $0.96{\mu}M$, 그리고 날개다랭이 trypsin이 $1.82{\mu}M$이었으며, 황다랭이의 trypsin이 TLCK에 대하여 가장 예민하게 반응하였다. 이들 trypsin의 효소 활성과 촉매효율은 연근해 온 대산 혈합육어인 멸치와 고등어 trypsin이 열대해역에서 온대해역에 걸쳐 널리 회유하는 혈합육어인 황다랭이와 날개다랭이의 trypsin에 비하여 높은 특징을 보였다.

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자외선 조사에 의해 노화된 섬유아세포에서 Cycloheterophyllin의 항노화 효능 (Anti-aging Effect of Cycloheterophyllin in UVA-irradiated Dermal Fibroblasts)

  • 심중현
    • 생약학회지
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    • 제50권4호
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    • pp.285-290
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    • 2019
  • This study was carried out to identify the skin anti-aging effect of cycloheterophyllin on dermal fibroblasts. To elucidate anti-aging effects of cycloheterophyllin on dermal fibroblasts, I measured cell viability, mRNA expressions, and Collagen, type I/matrix metallopeptidase 1(MMP1)-ELISA assay. In this study, I investigated the effects of cycloheterophyllin on Collagen, type I, alpha 1(COL1A1)/Collagen, type III, alpha 1(COL3A1)/MMP1/Superoxide dismutases/Catalase(CAT) mRNA expressions and Collagen, type I/MMP1 protein production. Quantitative Real-time RT-PCR showed that cycloheterophyllin increased mRNA level of COL1A1/COL3A1/CAT genes and collagen, type I protein by ELISA assay compared to UVA-treated dermal fibroblasts. Furthermore MMP1 mRNA and protein expressions were decreased by cycloheterophyllin treatment. These observations revealed that cycloheterophyllin increased anti-aging effects in dermal fibroblasts. Therefore, I identified the anti-aging effects of cycloheterophyllin, and these results showed that the cycloheterophyllin can be a considerable potent ingredient for skin anti-aging. Based on this, I anticipated further researches about cycloheterophyllin for mechanism to develop not only cosmetics but for healthcare food or medicine.

고양이 회장 종주근에서 Na-Ca 교환 기전의 특성에 관한 연구 (Na-Ca Exchange in Sarcolemmal Vesicles Isolated from Cat Ileal Longitudinal Muscle)

  • 우재석;서덕준;김용근;이상호
    • The Korean Journal of Physiology
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    • 제23권2호
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    • pp.237-252
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    • 1989
  • 고양이 회장 종주근에서 세포막 소포를 분리하여 $Na^+$의 농도 경사에 의존하여 일어나는 $Ca^{2+}$ 이동의 특성에 대하여 연구하였다. 막소포 내부에서 외부로 향하는 $Na^+$의 농도 경사 존재시 $Ca^{2+}$의 축적이 현저히 증가하여 $Na^+$ 의존성 $Ca^{2+}$ 축적을 보였으며, 이는 외부용액에 $Na^+$ ionophore인 monensin을 처리시 소실되었다. 한편 이러한 $Ca^{2+}$ 축적의 증가 작용은 $Na^+$에 특이적이었으며 $K^+$, $Li^+$, $Rb^+$, $Cs^+$ 및 choline이온은 $Na^+$의 작용을 대치하지 못하였다. $Ba^{2+}$, $Sr^{2+}$, $Mn^{2+}$$Cd^{2+}$ 등의 2가 양이온들은 0.5 mM의 농도에서 $Na^+$ 의존성 $Ca^{2+}$ 축적을 억제하였으나 $Mg^{2+}$은 이 농도에서 억제 효과를 보이지 않았다. 막소포 외부의 pH를 pH 6.0에서 8.5까지 증가시 $Na^+$ 의존성 $Ca^{2+}$ 축적이 증가하였다. Amiloride는 0.5 mM 이상의 농도에서 $Na^+$ 의존성 $Ca^{2+}$ 축적을 유의하게 억제하였으나 diltiazem 및 vanadate는 이 농도에서 유의한 억제효과를 보이지 않았다. 동력학적으로 분석하여 측정한 $Na^+$ 의존성 $Ca^{2+}$ 축적의 $Ca^{2+}$에 대한 $K_m$ 값은 $18.2\;{\mu}M$이었으며 5초에서 측정한 $V_{max}$값은 689.7 pmole/mg protein이었다. $Ca^{2+}$ 축적에 대한 $Na^+$ 농도 경사의 효과를 동력학적으로 분석한 결과 막소포 외부에서의 $Ca^{2+}$에 대한 친화도에는 변화없이 최고 이동치만 증가시켜 전형적인 비상경적 작용 양상을 보였다. $Ca^{2+}$ 축적에 대한 $Na^+$ 농도 경사의 효과를 $Na^+$ 농도에 따라 측정하여 Hill plot을 시행한 결과 Hill coefficient가 2.52로 나타났다. 막소포 내부로 향하는 $K^+$ 농도 경사하에서 valinomycin을 처리하여 막소포 내부에 양전위를 발생시킨 결과 $Na^+$ 의존성 $Ca^{2+}$ 축적이 증가하였다. 이와 같은 결과들은 고양이 회장 평활근에서 분리한 세포막에 $Na^{+}-Ca^{2+}$ 교환기전이 존재하고 이는 다른 조직에서 밝혀진 것과 유사한 특성을 지녔으며 electrogenic한 기전으로 작용할 가능성을 시사하였다.

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