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Genetic Distances between Tailfin Anchovy (Coilia nasus) Populations Analyzed by PCR

  • Jo, Soo-Gun;Yoon, Jong-Man
    • Development and Reproduction
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    • v.25 no.1
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    • pp.59-65
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    • 2021
  • The author established a PCR-based genetic platform to examine the hierarchical polar dendrogram of Euclidean genetic distances of one tailfin anchovy population, especially for Coilia nasus, which was further associated with other fish population, by connecting with specifically designed oligonucleotide primer sets. Five oligonucleotide primers were used to generate a total of 260 and 211 scorable fragments in Coilia populations I and II, respectively. The DNA fragments ranged from greater than (approximately) 100 to more than 2,000 bp. The average bandsharing values (BS) of individuals from the anchovy population I (0.693) displayed higher values than individuals from population II (0.675). The genetic distance between individuals established the existence of a close relationship in group II. Comparatively, individuals of one anchovy population were fairly related to other fish populations, as shown in the polar hierarchical dendrogram of Euclidean genetic distances. The noteworthy genetic distance determined between two Coilia nasus populations demonstrates that this PCR technique can be applied as one of the several devices for individuals and/or population biological DNA researches undertaken for safeguarding species and for production of anchovies in the littoral area of Korea.

Deblocking Filter for Low-complexity Video Decoder (저 복잡도 비디오 복호화기를 위한 디블록킹 필터)

  • Jo, Hyun-Ho;Nam, Jung-Hak;Jung, Kwang-Su;Sim, Dong-Gyu;Cho, Dae-Sung;Choi, Woong-Il
    • Journal of the Institute of Electronics Engineers of Korea SP
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    • v.47 no.3
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    • pp.32-43
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    • 2010
  • This paper presents deblocking filter for low-complexity video decoder. Baseline profile of the H.264/AVC used for mobile devices such as mobile phones has two times higher compression performance than the MPEG-4 Visual but it has a problem of serious complexity as using 1/4-pel interpolation filter, adaptive entropy model and deblocking filter. This paper presents low-complexity deblocking filter for decreasing complexity of decoder with preserving the coding efficiency of the H.264/AVC. In this paper, the proposed low-complexity deblocking filter decreased 49% of branch instruction than conventional approach as calculating value of BS by using the CBP. In addition, a range of filtering of strong filter applied in intra macroblock boundaries was limited to two pixels. According to the experimental results, the proposed low-complexity deblocking filter decreased -0.02% of the BDBitrate comparison with baseline profile of the H.264/AVC, decreased 42% of the complexity of deblocking filter, and decreased 8.96% of the complexity of decoder.

Fermented ginseng extract, BST204, disturbs adipogenesis of mesenchymal stem cells through inhibition of S6 kinase 1 signaling

  • Yi, Sang Ah;Lee, Jieun;Park, Sun Kyu;Kim, Jeom Yong;Park, Jong Woo;Lee, Min Gyu;Nam, Ki Hong;Park, Jee Hun;Oh, Hwamok;Kim, Saetbyul;Han, Jihoon;Kim, Bo Kyung;Jo, Dong-Gyu;Han, Jeung-Whan
    • Journal of Ginseng Research
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    • v.44 no.1
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    • pp.58-66
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    • 2020
  • Background: The biological and pharmacological effects of BST204, a fermented ginseng extract, have been reported in various disease conditions. However, its molecular action in metabolic disease remains poorly understood. In this study, we identified the antiadipogenic activity of BST204 resulting from its inhibition of the S6 kinase 1 (S6K1) signaling pathway. Methods: The inhibitory effects of BST204 on S6K1 signaling were investigated by immunoblot, nuclear fractionation, immunoprecipitation analyses. The antiadipogenic effect of BST204 was evaluated by measuring mRNA levels of adipogenic genes and by chromatin immunoprecipitation and quantitative real-time polymerase chain reaction analysis. Results: Treatment with BST204 inhibited activation and nuclear translocation of S6K1, further decreasing the interaction between S6K1 and histone H2B in 10T1/2 mesenchymal stem cells. Subsequently, phosphorylation of H2B at serine 36 (H2BS36p) by S6K1 was reduced by BST204, inducing an increase in the mRNA expression of Wnt6, Wnt10a, and Wnt10b, which disturbed adipogenic differentiation and promoted myogenic and early osteogenic gene expression. Consistently, BST204 treatment during adipogenic commitment suppressed the expression of adipogenic marker genes and lipid drop formation. Conclusion: Our results indicate that BST204 blocks adipogenesis of mesenchymal stem cells through the inhibition of S6K1-mediated histone phosphorylation. This study suggests the potential therapeutic strategy using BST204 to combat obesity and musculoskeletal diseases.

Antioxidative and Inhibitory Activities of Extract and Juice Powder from Hippophae rhamnoides L. against Nitric Oxide and Elastase Production (비타민나무 추출물 및 착즙 분말의 항산화 활성 및 Nitric Oxide 생성과 Elastase에 대한 저해활성)

  • Park, Ju Hee;Lee, Chan Ok;Yoo, Ji Hye;An, Nguyen Thi Lan;Yoo, Nam Ho;Kim, Myong Jo
    • Korean Journal of Medicinal Crop Science
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    • v.26 no.2
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    • pp.119-126
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    • 2018
  • Background: The flowering plant Hippophae rhamnoides L. has been used for many studies on fruit or leaf extracts. This study was conducted to investigate the development of a new cosmetic material from H. rhamnoides fruits and leaves that have by antioxidant, anti-inflammatory and wrinkle improvement activities. Methods and Results: The antioxidant abilities of H. rhamnoides extracts, including of a water-soluble fruit powder (FW), a fatsoluble fruit powder (FF), a supercritical extract of fruit by-product (BS), and a mixture of leaf and fruit (MIX), were investigated in vitro. A DPPH radical assay for antioxidant activity was performed for these fractions alongside assay to evaluate the total phenolic and flavonoid content (TPC and TFC). As expected, the MIX had the highest DPPH radical scavenging activity ($RC_{50}=10.27{\mu}g/m{\ell}$), and the TPC and TFC also were highest in MIX ($225.7mg{\cdot}GAE/g$, and $25.18mg{\cdot}QE/g$, respectively). Nitric oxide (NO) production in LPS-induced RAW264.7 cells was estimated and the results indicated an over 75% decrease of NO production in FF and MIX. In other assays, the highest elastase inhibitory activity was found in FW. Conclusions: These results revealed that H. rhamnoides extracts have a high potential for antioxidant, anti-inflammatory and antiwrinkle activities. H. rhamnoides products are suggested to be applied as the functional materials of cosmetic ingredients.

Electrophysiological and Morphological Classification of Inhibitory Interneurons in Layer II/III of the Rat Visual Cortex

  • Rhie, Duck-Joo;Kang, Ho-Young;Ryu, Gyeong-Ryul;Kim, Myung-Jun;Yoon, Shin-Hee;Hahn, Sang-June;Min, Do-Sik;Jo, Yang-Hyeok;Kim, Myung-Suk
    • The Korean Journal of Physiology and Pharmacology
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    • v.7 no.6
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    • pp.317-323
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    • 2003
  • Interneuron diversity is one of the key factors to hinder understanding the mechanism of cortical neural network functions even with their important roles. We characterized inhibitory interneurons in layer II/III of the rat primary visual cortex, using patch-clamp recording and confocal reconstruction, and classified inhibitory interneurons into fast spiking (FS), late spiking (LS), burst spiking (BS), and regular spiking non-pyramidal (RSNP) neurons according to their electrophysiological characteristics. Global parameters to identify inhibitory interneurons were resting membrane potential (>-70 mV) and action potential (AP) width (<0.9 msec at half amplitude). FS could be differentiated from LS, based on smaller amplitude of the AP (<∼50 mV) and shorter peak-to-trough time (P-T time) of the afterhyperpolarization (<4 msec). In addition to the shorter AP width, RSNP had the higher input resistance (>200 $M{Omega}$) and the shorter P-T time (<20 msec) than those of regular spiking pyramidal neurons. Confocal reconstruction of recorded cells revealed characteristic morphology of each subtype of inhibitory interneurons. Thus, our results provide at least four subtypes of inhibitory interneurons in layer II/III of the rat primary visual cortex and a classification scheme of inhibitory interneurons.

Efficient Transmit Antenna Selection Method for Massive MIMO system (Massive MIMO 시스템을 위한 효율적인 송신 안테나 선택 기법)

  • Ju, Sang-Lim;Lee, Byung-Jin;Kim, Young-Jae;Kim, Jin-Up;Bang, Young-Jo;Kim, Kyungseok
    • Journal of Satellite, Information and Communications
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    • v.11 no.3
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    • pp.58-64
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    • 2016
  • This paper proposes the efficient transmit antenna selection (TAS) scheme considering trade-off between the performance and the complexity in massive MIMO system. The massive MIMO system is a core technology to achieve performance objectives for 5 generation wireless communication. It achieve high spectral efficiency, a reliability, and a diversity gain. However many RF chains required by massive transmit antennas equipped in a base station create the problem such as high hardware cost and complexity. Therefor we investigates the transmit antenna selection scheme, in which the number of RF chains of BS is reduced, and the trade-off between the performance and the complexity is considered for proposed scheme. And, the spectral efficiency and complexity are analysed by transmit antenna selection schemes.

QoS-Aware Group Scan Scheduling in WiMAX Networks (WiMAX 네트워크에서 QoS 기반의 그룹 스캔 스케쥴링 기법)

  • Choi, Jae-Kark;Yoo, Sang-Jo
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.35 no.2A
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    • pp.186-195
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    • 2010
  • For the fast target base station channel decision in WiMAX networks, fast group scanning scheme was suggested, in which mobile stations in proximity of each other form a group and scan the candidate channels dispersively. However, the previous group scanning scheme does not consider the different QoS requirements of each MS in a group. In this paper we propose the enhanced group scanning scheme, so-called QoS-aware group scan scheduling scheme, that makes mobile stations in a group scan the candidate channels without deteriorating the QoS requirements. We introduce the QoS-aware channel scanning concept of a individual mobile station and show the different scanning latencies due to the different QoS requirements. With the help of the efficient channel allocation by the serving BS, in the proposed scanning scheme, a mobile station with relatively higher QoS in a group scans less amount of candidate channels than the others with relatively lower QoS, while the mobile stations in a group still guarantees the fast target base station decision. The performance results show that our proposed scanning scheme results in the fast target base station decision while considering the QoS requirements of each MS.

A Study of Coffee Bean Characteristics and Coffee Flavors in Relation to Roasting (커피원두의 배전강도에 따른 품질특성 및 향기성분에 관한 연구)

  • Lee, Moon Jo;Kim, Sang Eun;Kim, Jong Hwan;Lee, Sang Won;Yeum, Dong Min
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.42 no.2
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    • pp.255-261
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    • 2013
  • This study investigated changes in the physicochemical characteristics and coffee flavors of coffee beans under different roasting conditions. Four different kinds of roasted coffees were analyzed using a headspace gas chromatographic technique. The moisture content and total acidity of roasted coffee decreased whereas the pH and weight loss (%) increased, as coffee beans were roasted at higher temperatures. The Hunter's color values of the roasted coffee (indicating L (lightness) and b (yellowness)) decreased as the roasting temperature of the coffee beans increased, but a (redness) value only increased with light roasting. We also noted that the color of the Arabica coffee was darker than that of the Robusta coffee. The aroma compounds, acetaldehyde, acetone, 2-methylfuran, 2-methylbutanol, 2-methylpyrazine, furfural, 2-propanone, furfuryl alcohol, 2,5-dimethylpyrazine and furfuryl acetate were mainly analyzed. A sensory evaluation of all light-roasted coffees had flavor and sourness and those of all medium-roasted coffees had heaviness and finishness.

The Development of Water Quality Monitoring System and its Application Using Satellite Image Data

  • Jang, Dong-Ho;Jo, Gi-Ho
    • Proceedings of the KSRS Conference
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    • 1998.09a
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    • pp.376-381
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    • 1998
  • In this study, we was measured the radiance reflectance by using multi-spectral image of low resolution camera(LRC) which will be loaded in the multi-purpose satellite(KOMPSAT) to use the data in analyzing water pollution. Also we investigated the possibility of extraction of water quality factors in rivers and water body by using high resolution remote sensing data such as Airborne MSS. Especially, we tried to extract the environmental factors related with eutrophication, and also tried to develop the process technique and the radiance feature of reflectance related with eutrophication. The results were summarized as follows: First, the spectrum of sun's rays which reaches the surface of the earth was consistent with visible rays bands of 0.4${\mu}{\textrm}{m}$~0.7${\mu}{\textrm}{m}$ and about 50% of total quantity of radiation were there. And at around 0.5${\mu}{\textrm}{m}$ of green spectral band in visible rays bands, the spectrum was highest. Second, as a result of the radiance reflectance Chlorophyll-a represented high spectral reflectance mainly around 0.52${\mu}{\textrm}{m}$ of green spectral band, and suspended sediments and turbidity represented high spectral reflectance at 0.8${\mu}{\textrm}{m}$ and at 0.57${\mu}{\textrm}{m}$ each. Third, as a result of the water quality analysis by using Airborne MSS, Chlorophyll-a could have a distribution chart when carried out ratio of B3 and BS to B7. And Band 7 was useful for making the distribution chart of suspended sediments. And when we carried out PCA, suspended sediments and turbidity had distributions at PC 1 , PC 4 each similarly to ground truth data. Above results can be changed according to the change of season and time. Therefore, in order to analyze more exactly the environmental factors of water quality by using LRC data, we need to investigate constantly the ground truth data and the radiance feature of reflectance of water body. Afterward in this study, we will constantly analyze the radiance feature of the surface of water in water body by measuring the on-the-spot radiance reflectance and using low resolution satellite image(SeaWiFs). Besides, we will gather the data of water quality analysis in water body and analyze the pattern of water pollution.

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Epidemics of Ascetic Meningitis in Kyoungsangnamdo from May to August, 1996 (96년도 상반기에 경상남도 중부지방에서 유행한 무균성 뇌막염에 대한 고찰)

  • Kwon, Oh Su;Lee, Kyoung Lim;Kim, Won Youb;Jung, Won Jo;Ma, Sang Hyouk;Lee, Kyu Man
    • Pediatric Infection and Vaccine
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    • v.4 no.1
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    • pp.97-105
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    • 1997
  • Purpose : Aseptic meningitis mainly caused by enterovirus is common in pediatric population especially during summer & fall. Most of pediatric patients restore their health without any complications with proper management. Between May to August of 1996, Masan and surrounding areas of the Kyoungsangnamdo were epidemic areas for the aseptic meningitis. The purpose of this study was to determine causative virus and describe correlation between disease and clinical symptoms in aseptic meningitis patients and those with fever and characteristic rashes without apparent meningitis symptoms. Methods : Between May to August, 1996, 57 patients with high fever and characteristic feature of rashes were reviewed. From 22 cerebrospinal fluid & 57 stool obtained specimens, viral culture and detection of enterovirus RNA were conducted. Collected specimens were kept in $-30^{\circ}C$ environment until sending of specimens to labortory. The virus identified through indirect immunofluorescence. RT-PCR method was used to identify enterovirus RNA in cerebralspinal fluid. Results : 1) One hundred fifty five pediatric patients with viral infection required hospitalization. Disease occurred higher rate in male than female with ratio of 1.94:1. Examined patients' age ranged from 15days old to 15years old. But most of patients(74.8%) were under age of 5years old. The time of occurrence was between May to August of 1996. 2) All patients had high fever and physical symptoms in those patients include headache, vomiting, abdominal pain, diarrhea, and rashes. The rashes observed mainly in patients under age of 4 years and were predominantly commom patients under age of 18 months olds)<0.001). 3) Between sampled patients and non-sampled patients, clinical course was similar. Echovirus type 9 was cultivated in 41 out of 57 cases of collected stool specimens. RT-PCR that used on CSF showed positive results in 10 out of 22 cases. Three cases of positive cultivated of positive results in RT-PCR were echovirus type 9. Conclusions : Echovirus type 9 was thought to be the causative agent of aseptic meningitis that was prevalent throughout mid areas of Kyoungsangnamdo from May to August, 1996. Additionally causative agent that responsible for high fever with rashes without meningitis symptoms also thought to be the same echovirus type 9.

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