• Title/Summary/Keyword: Isolation plate

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Isolation of a Novel Gellan-Depolymerizing Bacillus sp. Strain YJ-1

  • Jung, Yu-Jin;Park, Cheon-Seok;Lee, Hyeon-Gyu;Cha, Jae-Ho
    • Journal of Microbiology and Biotechnology
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    • v.16 no.12
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    • pp.1868-1873
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    • 2006
  • A novel microorganism that could degrade high molecular weight gellan was screened and isolated from soil. On gellan plate, the microorganism grew well and completely liquefied the plate. The gellan-degrading microorganism was isolated by pure culture on glucose and nutrient agar medium afterwards. The 16S rDNA sequence analysis and biochemical tests using an API 50CHB/20E kit revealed that the strain belonged to Bacillus sp. The isolate, named as Bacillus sp. YJ-1, showed optimum gellan-degrading activity in 0.5% gellan medium at pH 7.5 and 37$^{\circ}C$. The activity was measured and evaluated by the thiobarbituric acid and thin-layer chromatography method. Mass spectrometry revealed that the major gellan.. depolymerized product was an unsaturated tetrasaccharide consisting of $\Delta$4,5-glucuronic acid-(1$\rightarrow$4 )-$\beta$-D-glucose-(1$\rightarrow$4)- $\alpha$-L-rhamnose-(1$\rightarrow$3)-$\beta$-D-glucose, which is a dehydrated repeating unit of gellan, thus the enzyme was identified as gellan lyase. When the gellan was present in the medium, the gellan-degrading activity was much higher than that in glucose-grown cells. These results indicate that in the presence of gellan, Bacillus sp. YJ-1 is able to metabolize the gellan by inducing gellan-degrading enzymes that can degrade gellan into small molecular weight oligosaccharides, and then the gellan. depolymerized products are taken up by the cells and utilized by intracellular enzymes.

Isolation, Identification, and Characterization of Pichia guilliermondii K123-1 and Candida fermentati SI, Producing Isoflavone β-Glycosidase to Hydrolyze Isoflavone Glycoside Efficiently, from the Korean Traditional Soybean Paste

  • Kim, Won-Chan;So, Jai-Hyun;Kim, Sang-In;Shin, Jae-Ho;Song, Kyung-Sik;Yu, Choon-Bal;Kho, Yung-Hee;Rhee, In-Koo
    • Journal of Applied Biological Chemistry
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    • v.52 no.4
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    • pp.163-169
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    • 2009
  • A total of 155 microbial strains were isolated from the Korean traditional soybean paste based on their morphological features on the growth of agar plate. Among the isolated strains, a total of 28 strains were capable of hydrolyzing isoflavone glycoside to isoflavone aglycone efficiently in the soybean paste. Finally, two strains, K123-1 and SI, were selected because of their resistance to 15% NaCl and ability to convert isoflavone glycoside to isoflavone aglycone efficiently during the fermentation of soybean paste. The isolated strains K123-1 and SI were identified to be Pichia guilliermondii and Candida fermentati, respectively, using the partial 26S rDNA sequence analysis and phylogenic analysis. Pichia guilliermondii K123-1 and Candida fermentati SI converted daidzin to daidzein up to 96% and 95%, respectively, and genistin to genistein up to 92% when soybean pastes were fermented at $30^{\circ}C$ for 20 days with a single isolated strain. Pichia guilliermondii K123-1 and Candida fermentati SI were able to grow in the presence of 15% NaCl on both liquid medium and agar plate. We think that Pichia guilliermondii K123-1 and Candida fermentati SI might be one of good candidates for making functional soybean paste because they are isolated from the Korean traditional soybean paste and have a good ability to convert isoflavone glycosides to isoflavone aglycones and a high salt tolerance.

An estimate of structure-borne sound by the excitation at an arbitrary point on the rectangular plate with fixed edges (주변고정 장방형 평판에 있어서 임의점 가진에 의한 고체전파음의 예측)

  • 김의간
    • Journal of Advanced Marine Engineering and Technology
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    • v.12 no.2
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    • pp.21-34
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    • 1988
  • Machinery enclosures are widely adopted to reduce the noise emission in various fields of application. Emitted noise, which is due to the vibration of enclosure's outer surface, is composed of two kinds of sound with different path of propagation. One is the "structure-borne sound", while the other is "air-borne sound". In order to get a most efficient machinery enclouser a prudent consideration upon the above structure-borne and air-borne sound is required, as the guiding principle of contermeasure for each noise is quite different. The controlling of input vibration and its isolation are major subjects for the structure-borne sound, and the specifications of absorbing members and damping panels are the major related matters for the air-borne sound. Hence, it seems very efficient to separate the total sounds into two categories with a great accuracy when one think of further reduction of noise from the existing enclosure, although its separating methods have not been made clear for many years. Author proposes an application method of experimental modal analysis to extract the structure-borne sound from the measured total radiation sound, as the air-borne sound is deduced by the vectorial difference between the measured total radiation sound and the calculated structure-borne sound. In order to calculate the correct structure-borne sound by the excitation at an arbitrary point on the enclosure structure, it is important to decide 1) how to estimate the enclosure's surface vibration velocity and 2) how to compute the radiation sound which is considered as the effect of vibration modes of enclosure surface. The former can be solved with total frequency response function calculated by the application of experimental modal analysis. The latter is to be solved by the author's new approaches for radiation sound computation by means of the Rayleigh's integral equation and the boundary-element method applied complex surface vibration velocity. As a first step, structure-borne sound by the excitation at an arbitry point on the rectangular plate with fixed edges, has been calculated to verified the reliability of the developed computation methods. The results of calculation show good agreements with those of the actual measurements.actual measurements.

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Modeling and Analysis of Active Mounting System for a Plate-Type Structure (플레이트 형태의 구조물에 대한 능동 마운팅 시스템의 모델링 및 해석)

  • Hong, Dongwoo;Kim, Byeongil
    • Transactions of the Korean Society of Mechanical Engineers A
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    • v.41 no.10
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    • pp.915-921
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    • 2017
  • Recently, studies to reduce vibration and noise of automobiles have been actively conducted. However, previous studies did not concentrate on the optimization of the mount system with passive or active mounts. This study analytically studies an active mounting system with three active structural paths between source and receiver and the feasibility has been verified. Active mounting system has a coupled structure of piezoelectric stack actuators and passive mounts. A dynamic model of the whole system is prepared and the control force and phase of the stack actuators in each path are determined to target full isolation of each path. Its performance on vibration attenuation is investigated and based on it, optimized combinations of passive and active paths for the best attenuation are presented.

A STUDY ON THE ISOLATION AND SEROTYPING OF STREPTOCOCCUS MUTANS FROM DENTAL PLAQUE OF CARIOUS LESION (치아우식증(齒牙齲蝕症)의 환자(患者)의 우식이환부(齲蝕罹患部) 치태(齒苔)로 부터 Streptococcus mutans의 분리(分離)와 혈청형(血淸型)에 관(關)한 연구(硏究))

  • Lee, Chae-Dong;Choi, Ho-Young;Park, Sang-Jin
    • Restorative Dentistry and Endodontics
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    • v.8 no.1
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    • pp.31-44
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    • 1982
  • Streptococcus mutans strains were isolated from dental plaques of carious lesions of 53 patients on mitis-salivarius-bacitracin (MSB) and mitis-salivarius(MS) medium as a supplement. The epidemiological investigation was carried out to determine the biotypes and serotypes of S. mutans isolates. For the serotyping, autoclaved extract antigens from the isolates and serotype-specific antisera against seven known serotypes of S. mutans were prepared. The serotypes of the isolates were demonstrated in immunodiffusion test. In addtition, the prevalence of ${\beta}$-hemolysis on 5% sheep blood agar plate in restricted anaerobic condition and yellow pigment production on 5% sucrose agar plate in less anaerobic condition among the isolates were investigated. The results were as follows: 1. Forty-eight S. mutans strains were isolated from dental plaque samples of 33 patients (62.3%) among 53 patients. 2. Of the isolates, some strains were not grown on MSB medium. 3. Serotype c S. mutans was found in 60.6%, serotype d was found in 30.3% of the patients who were known to harbor S. mutans. 4. Of. the isolates, serotype c isolates were most prevalent (43.8%), serotype d isolates were 25.0%, and serotype b, e, f and g isolates were also found but in lower frequencies. Serotype a S. mutans were not detected. 5. The correlation between serotype and biotype of the isolates was found in 78.6% of the typing cases. 6. Strains revealed ${\beta}$-hemolysis were in 52.1% of the isolates, strains produced yellow pigment were in 47.9% of the isolates, and with one exception, all the strains were belong to serotype c, e and f. 7. The majority of the isolates which revealed ${\beta}$-hemolysis appeared to be yellow pigmented, these isolates were belong to serotype c, e and f.

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Isolation and Genetic Mapping of Paraquat Resistant Sporulating Mutants of Streptomyces Coelicolor

  • Chung, Hye-Jung;Kim, Eun-Ja;Park, Uhn-Mee;Roe, Jung-Hye
    • Journal of Microbiology
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    • v.33 no.3
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    • pp.215-221
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    • 1995
  • S. coelicolor A3(2) cells were treated with various redox-cycling agents on nutrient agar plates and examined for their effect on the growth and differentiation. When treated with plumbagin, severe effect on cell viability was observed at concentrations above 250 $\mu$M. However, the surviving colonies differentiated normally. When treated with 100 $\mu$M paraquat, growth rate was decreased and morphological differentiation was inhibited, while the survival rate was maintained at about 100% even at 5 mM paraquat. Menadione or lawsone did not cause any visible changes at concentrations up to 1 mM. The effect of paraquat was also observed when it was added to nutrient agar plate before spore inoculation. Paraquat had also observed when it was added to nutrient agar plate before spore inoculation. Paraquat had no effect on colonies growing on R2YE agar plates. Among the components of R2YE medium selectively added to nutrient agar medium, CaCl$_2$ was found to have some protective function from the inhibitory effect of paraquat. As a first step to study the mechanism of the inhibitory effect of paraquat on differentiation, resistant mutants which sporulate well in the presence of paraquat were screened following UV mutagenesis. Three paraquat-resistant mutants were isolated with a frequency of 3 $\times$10${-5}$. Their mutation sites were determined by genetic crossings. All three mutations were mapped to a single locus near arg4 at about 1 o'clock on the genetic map of S. coelicolor A3(2).

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Isolation and Identification of Intestinal Bacteria of C57BL/6 Mice to Assess Biological Activities of Plant Resources

  • Jeon, Yong-Deok;Kim, Seong-Sun;Jin, Yu-Mi;Ko, Se-Woong;Lee, Gyu-Lim;Jin, Jong-Sik
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2019.10a
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    • pp.105-105
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    • 2019
  • Much of bacteria inhabit intestine and affect health. To elucidate the composition of intestinal bacteria and biological activities of plant materials on the bacteria, bacterial strains are need to be isolated and identified. In previous study, we isolated 41 fecal bacteria of BALB/c mice and the strains were identified as 11 species including Lactobacillus murinus and not classified bacterium. To expand the bacterial resources, we tried to isolate more bacteria from C57BL/6 mice. Fresh feces was suspended and serially diluted in distilled water. The aliquots were inoculated on GAM agar plate and incubated anaerobically at $37^{\circ}C$ for 48 h. Each of colony formed was picked up and incubated again on GAM agar plate for stock and sampling. The bacteria gained were analyzed and identified by 16S rRNA gene. The bacterial strain were listed up. Major strain was Lactobacillus murinus which was observed as an abundant strain of BALB/c mice. The resources could be used for experiments of biological activities of plant materials and microbial composition of intestinal contents of experimental animals.

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Design of buckling restrained braces with composite technique

  • Ozcelik, Ramazan;Dikiciasik, Yagmur;Civelek, Kazim B.;Erdil, Elif F.;Erdal, Ferhat
    • Steel and Composite Structures
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    • v.35 no.5
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    • pp.687-699
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    • 2020
  • This paper focus on the buckling restrained braces (BRBs) with new casing members (CMs). Seven BRBs with CMs consisting of precast concrete modules (PCMs) were tested to investigate the effects of CMs on the cyclic performance of BRBs. The PCMs consisted of plain and reinforced concrete casted into wooden or steel molds than they were located on the core plate (CP) via bolts. There were 14 or 18 PCMs on the CP for each BRBs. The technique of the PCMs for the CM provides that the BRBs can be constructed inside the steel or reinforced concrete (RC) structures. In this way, their applications may be rapid and practical during the application of the retrofitting. The test results indicated that the cyclic performance of the BRBs was dominated by the connection strength and confinement of the PCMs. The BRBs with PCMs wrapped with fiber reinforced polymers (FRPs) sustained stable hysteretic performance up to a CP strain of 2.0 %. This indicates that the new designed BRBs with PCMs were found to be acceptable in terms of cyclic performance. Furthermore, the connection details, isolation materials and their application techniques have been also investigated for the improved BRB design in this study.

Isolation of Chitin-utilizing Bacterium and Production of Its Extracellular Chitinase

  • Woo, Cheol-Joo;Yun, Un-Jung;Park, Heul-Doung
    • Journal of Microbiology and Biotechnology
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    • v.6 no.6
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    • pp.439-444
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    • 1996
  • A bacterial strain, designated as WY22, producing extracellular chitinase was isolated from the soil around the Youngduck area, after enrichment culture in a medium containing $1{\%}$ (w/v) wet colloidal chitin as a sole carbon source. The isolate was identified as a strain of Bacillus sp. based on its morphological and physiological characteristics. It was observed that Bacillus sp. WY22 could inhibit the growth of Fusarium oxysporum with hyphal extention-inhibition assay on potato dextrose agar plate supplemented with $1{\%}$ collidal chitin. Optimum culture conditions of Bacillus sp. WY22 were examined for chitinase production in a chitin medium. High level production of chitinase was observed not only in the chitin medium but in a medium supplemented with $1{\%}$ N-glucosamine or lactose instead of chitin. The optimum concentrations of colloidal chitin and yeast extract were 3.0 and $0.5{\%}$, and the optimum culture conditions for initial pH of medium and temperature were 7.0 and $30^{\circ}C$, respectively, for the production of chitinase.

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Isolation and Numerical Identification of Streptomyces humidus strain S5-55 Antagonistic to Plant Pathogenic Fungi

  • Lim, Song-Won;Kim, Jeong-Dong;Kim, Biom-Seok;Hwang, Byung-Kook
    • The Plant Pathology Journal
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    • v.16 no.4
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    • pp.189-199
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    • 2000
  • To search for the antifungal substances, various actino-mycete isolates were obtained from various soils of Korea using plate dilution method on the humic acid vitamin agar plates. In the screening procedures using a dual culture method, 32 actionomycete isolates were selected, which showed the inhibitory activity against mycelial growth of plant pathogenic fungi Altirnaria mali, Colletotrichum gloeosporides, Fusarium oxysporum f.sp. cucumerinum, Magnaporthe grisea, Phytophthora capsici, and Rhizoctonia solani. Bioassay of the crude extracts from culture filtrates and mycelial mets revealed that 12 antagonistic actionomycetes produced highly active antifungal substances. Actinomycete strain S5-55 which showed the substantial antifungal activity against the tested fungi was selected for production of the antifungal substances. Based on the cytochemical and morphological characteristics, strain S5-55 was identified as a Streptomyces species. The results of the numerical identification using the TAXON program confirmed that Streptomyces strain S5-55 was identical with Streptomyces humidus including in TAXON major cluster 19. The production of antifungal substance was most favorable when S. humidus strain S5-55 was cultivated for 10 dats on soluble starch broth supplemented with $K_2$HPO$_4$. The antifungal substances active against the plant pathogenic fungi P. capsici and M. grisea were partially purified using $\textrm{C}_{18}$ reversed-phase column chromatography.

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