• 생명과학회지
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• 제17권7호통권87호
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• pp.976-982
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• 2007

본 연구는 분화 전단계인 C2C12 myoblast세포에 중요한 후천적 기작의 하나인 DNA 히스톤 단백질의 아세틸화를 조절하였을 때 일어나는 변화를 살펴본 결과, 히스톤 탈아세틸화 효소를 trichostatin A로서 억제시키자 C2C12 myoblast 세포가 smooth muscle로 분화하였다. 이는 immunofluorescentstaining을 통해 smooth muscle ${\alpha}-actin$의 발현 증가를 trishostatin A로 처리한 세포에서 관찰하였으며, DAPI 염색을 통해 대조군 세포와 비교하여 세포의 증식이 많이 억제됨을 관찰하였다. 또한 real-time PCR 결과는 smooth muscle ${\alpha}$-actin과 transgelin mRNA의 발현이 trichostatin A 처리군 세포에서 현저히 증가함을 보여주었다. 이러한 결과를 바탕으로 히스톤 단백질의 탈아세틸화 억제는 C2C12 myoblast 세포의 분화에 매우 중요한 역할을 하며, 또한 C2C12 myoblast 세포를 골격근인 다핵의 myotube로 분화시키지 않고, smooth muscle로 분화시킴을 알 수 있었다. 이것은 분명히 HDAC억제제 인 trichostatin A가 DNA 히스톤 단백질의 HDAC 효소에 의한 탈아세틸화를 강력히 억제하고, 이러한 HDAC효소의 억제는 세포주기에 있어서 증식과 분화를 조절하는 유전자들의 발현을 조절하였음을 시사한다. 이를 검증하기 위해 세포주기 조절인자인 p21과 cyclin Dl mRNA의 발현을 조사한 결과 세포를 증식단계로 진행하는데 있어서 필수적인 cdk 억제제인 p21 mRNA의 발현이 trichostatin A로 처리한 세포에서 현저히 증가함을 보였으며, 세포 증식을 유도하는 cyclin Dl mRNA의 발현은 trichostatin A를 처 리 한 후 24시간 후 유의하게 감소함을 보였는데 이는 trichostatin A가 세포증식을 억제하는 초기단계에서 cyclin Dl 유전자의 발현을 조절함을 보여준다. 향후 연구에서는 또 하나의 중요한 후천적 기작인 DNA 메틸화와 히스톤 아세틸화가 유전자 발현을 조절하는데 있어서 상호작용에 대한 연구가 필요할 것으로 생각된다.

• Interdisciplinary Bio Central
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• 제3권4호
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• pp.15.1-15.11
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• 2011

Background: Histone deacetylase (HDAC) 8 is one of its family members catalyzes the removal of acetyl groups from N-terminal lysine residues of histone proteins thereby restricts transcription factors from being expressed. Inhibition of HDAC8 has become an emerging and effective anti-cancer therapy for various cancers. Application computational methodologies may result in identifying the key components that can be used in developing future potent HDAC8 inhibitors. Results: Facilitating the discovery of novel and potential chemical scaffolds as starting points in the future HDAC8 inhibitor design, quantitative structure-activity relationship models were generated with 30 training set compounds using genetic function approximation (GFA) and Bayesian algorithms. Six GFA models were selected based on the significant statistical parameters calculated during model development. A Bayesian model using fingerprints was developed with a receiver operating characteristic curve cross-validation value of 0.902. An external test set of 54 diverse compounds was used in validating the models. Conclusions: Finally two out of six models based on their predictive ability over the test set compounds were selected as final GFA models. The Bayesian model has displayed a high classifying ability with the same test set compounds and the positively and negatively contributing molecular fingerprints were also unveiled by the model. The effectively contributing physicochemical properties and molecular fingerprints from a set of known HDAC8 inhibitors were identified and can be used in designing future HDAC8 inhibitors.

• BMB Reports
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• 제54권10호
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• pp.534-539
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• 2021

IL-10⁺ regulatory B (Breg) cells play a vital role in regulating the immune responses in experimental autoimmune encephalomyelitis, colitis, and contact hypersensitivity (CHS). Several stimulants such as lipopolysaccharide (LPS), CD40 ligand, and IL-21 spur the activation and maturation of IL-10⁺ Breg cells, while the epigenetic mechanism for the IL-10 expression remains largely unknown. It is well accepted that the histone acetylation/deacetylation is an important mechanism that regulates the expression of IL-10. We found that entinostat, an HDAC inhibitor, stimulated the induction of IL-10⁺ Breg cells by LPS in vitro and the formation of IL-10⁺ Breg cells to suppress CHS in vivo. We further demonstrated that entinostat inhibited HDAC1 from binding to the proximal region of the IL-10 expression promoter in splenic B cells, followed by an increase in the binding of NF-κB p65, eventually enhancing the expression of IL-10 in Breg cells.

• 대한유전성대사질환학회지
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• 제20권1호
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• pp.1-13
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• 2020

Gaucher disease (GD)는 glucocerebrosidase 유전자(GBA)의 돌연변이에 의하여 발병하는 전세계적으로 가장 유병율이 높은 리소좀 축적질환이다. GD는 신경학적인 증상의 유무에 따라 3가지 임상형으로 구분된다. 신경병증 GD인 2형과 3형의 경우는 대뇌에서 glucosylceramide (GlcCer)와 glucosylsphingosine (GlcSph)의 농도가 증가하면서 신경세포의 심각한 손실이 야기되는 특징을 보인다. 신경교종에서 유래한 H4 세포를 GD에서 증가하는 기질인 GluCer와 GlcSph를 첨가하여 배양하였을 때, 심각한 DNA손상과 더불어 세포의 사멸이 야기되는 것과 이러한 신경세포의 사멸은 GluCer 보다는 GlcSph을 처리하였을 때 더 현저하게 증가하는 것을 관찰하였다. H4 세포에 히스톤 탈아세틸화 효소(HDAC) 6의 저해제인 tubacin과 GlcSph을 함께 처리하였을 경우에는 DNA손상은 물론 GlcSph에 의하여 유도된 세포사멸과 관련된 단백질 인자들의 발현이 모두 감소되었다. 본 연구를 통해 GlcSph이 세포사멸을 통하여 신경병증 GD의 발병에 주요한 역할을 한다는 것을 알 수 있었고, HDAC6 저해제가 신경병증 GD 환자를 위한 치료제 후보물질로 제시될 수 있는 가능성을 확인하였다.

• The Korean Journal of Physiology and Pharmacology
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• 제28권1호
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• pp.83-91
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• 2024

Hypoxia-inducible factor-1 alpha (HIF-1α) is a transcription factor activated under hypoxic conditions, and it plays a crucial role in cellular stress regulation. While HIF-1α activity is essential in normal tissues, its presence in the tumor microenvironment represents a significant risk factor as it can induce angiogenesis and confer resistance to anti-cancer drugs, thereby contributing to poor prognoses. Typically, HIF-1α undergoes rapid degradation in normoxic conditions via oxygen-dependent degradation mechanisms. However, certain cancer cells can express HIF-1α even under normoxia. In this study, we observed an inclination toward increased normoxic HIF-1α expression in cancer cell lines exhibiting increased HDAC6 expression, which prompted the hypothesis that HDAC6 may modulate HIF-1α stability in normoxic conditions. To prove this hypothesis, several cancer cells with relatively higher HIF-1α levels under normoxic conditions were treated with ACY-241, a selective HDAC6 inhibitor, and small interfering RNAs for HDAC6 knockdown. Our data revealed a significant reduction in HIF-1α expression upon HDAC6 inhibition. Moreover, the downregulation of HIF-1α under normoxic conditions decreased zinc finger E-box-binding homeobox 1 expression and increased E-cadherin levels in lung cancer H1975 cells, consequently suppressing cell invasion and migration. ACY-241 treatment also demonstrated an inhibitory effect on cell invasion and migration by reducing HIF-1α level. This study confirms that HDAC6 knockdown and ACY-241 treatment effectively decrease HIF-1α expression under normoxia, thereby suppressing the epithelial-mesenchymal transition. These findings highlight the potential of selective HDAC6 inhibition as an innovative therapeutic strategy for lung cancer.

• BMB Reports
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• 제42권10호
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• pp.655-660
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• 2009

The potential anti-metastasis and anti-invasion activities of early growth response gene-1 (Egr-1) and claudin-3, a tight junction (TJ)-related protein, were evaluated using histone deacetylase (HDAC) inhibitors in human hepatocarcinoma cells. The results of wound healing and Transwell assays showed that HDAC inhibitors such as trichostatin A and sodium butyrate inhibited cell migration and invasion. HDAC inhibitors markedly induced Egr-1 expression during the early period, after which expression levels decreased. In addition, the down-regulation of snail and type 1 insulin-like growth factor receptor (IGF-1R) in HDAC inhibitor- treated cells induced the upregulation of thrombospondin-1 (TSP-1), E-cadherin and claudin-3. Cells transfected with Egr-1 and claudin-3 siRNA displayed significant blockage of HDAC inhibitor-induced anti-invasive activity. Collectively, these findings indicate that the up-regulation of Egr-1 and claudin-3 are crucial steps in HDAC inhibitor-induced anti-metastasis and anti-invasion.

• Asian Pacific Journal of Cancer Prevention
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• 제14권2호
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• pp.915-921
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• 2013

Background: Hepatocellular carcinoma is one of the leading causes of mortalities worldwide. The search for new therapeutic targets is of utmost importance for improved treatment. Altered expression of HDAC1 in hepatocellular carcinoma (HCC) and its requirement for liver formation in zebrafish, suggest that it may regulate key events in liver carcinogenesis and organogenesis. However, molecular mechanisms of HDAC1 action in liver carcinogenesis are largely unknown. The present study was conducted to identify HDAC1 interacting proteins in HepG2 cells using modified SH-double-affinity purification coupled with liquid mass spectrophotemetery. Materials and Methods: HepG2 cells were transfected with a construct containing HDAC1 with a C-terminal strepIII-HA tag as bait. Bait proteins were confirmed to be expressed in HepG2 cells by western blotting and purified by double affinity columns and protein complexes for analysis on a Thermo LTQ Orbitrap XL using a C18 nano flow ESI liquid chromatography system. Results: There were 27 proteins which showed novel interactions with HDAC1 identified only in this study, while 14 were among the established interactors. Various subunits of T complex proteins (TCP1) and prefoldin proteins (PFDN) were identified as interacting partners that showed high affinity with HDAC1 in HepG2 cells. Conclusions: The double affinity purification method adopted in this study was very successful in terms of specificity and reproducibility. The novel HDAC1 complex identified in this study could be better therapeutic target for treatment of hepatocellular carcinoma.

• Biomolecules & Therapeutics
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• 제23권5호
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• pp.434-441
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• 2015

Histone deacetylase (HDAC) inhibitors are considered novel agents for cancer chemotherapy. We previously investigated MHY219, a new HDAC inhibitor, and its potent anticancer activity in human prostate cancer cells. In the present study, we evaluated MHY219 molecular mechanisms involved in the regulation of prostate cancer cell migration. Similar to suberanilohydroxamic acid (SAHA), MHY219 inhibited HDAC1 enzyme activity in a dose-dependent manner. MHY219 cytotoxicity was higher in LNCaP ($IC_{50}=0.67{\mu}M$) than in DU145 cells ($IC_{50}=1.10{\mu}M$) and PC3 cells ($IC_{50}=5.60{\mu}M$) after 48 h of treatment. MHY219 significantly inhibited the HDAC1 protein levels in LNCaP and DU145 cells at high concentrations. However, inhibitory effects of MHY219 on HDAC proteins levels varied based on the cell type. MHY219 significantly inhibited LNCaP and DU145 cells migration by down-regulation of matrix metalloprotease-1 (MMP-1) and MMP-2 and induction of tissue inhibitor of metalloproteinases-1 (TIMP-1). These results suggest that MHY219 may potentially be used as an anticancer agent to block cancer cell migration through the repression of MMP-1 and MMP-2, which is related to the reduction of HDAC1.

• Biomolecules & Therapeutics
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• 제20권3호
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• pp.280-285
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• 2012

The developing embryo naturally experiences relatively low oxygen conditions in vivo. Under in vitro hypoxia, mouse embryonic stem cells (mESCs) lose their self-renewal activity and display an early differentiated morphology mediated by the hypoxia-inducible factor-$1{\alpha}$ (HIF-$1{\alpha}$). Previously, we demonstrated that histone deacetylase (HDAC) is activated by hypoxia and increases the protein stability and transcriptional activity of HIF-$1{\alpha}$ in many human cancer cells. Furthermore HDAC1 and 3 mediate the differentiation of mECSs and hematopoietic stem cells. However, the role of HDACs and their inhibitors in hypoxia-induced early differentiation of mESCs remains largely unknown. Here, we examined the effects of several histone deacetylase inhibitors (HDACIs) on the self-renewal properties of mESCs under hypoxia. Inhibition of HDAC under hypoxia effectively decreased the HIF-$1{\alpha}$ protein levels and substantially improved the expression of the LIF-specific receptor (LIFR) and phosphorylated-STAT3 in mESCs. In particular, valproic acid (VPA), a pan HDACI, showed dramatic changes in HIF-$1{\alpha}$ protein levels and LIFR protein expression levels compared to other HDACIs, including sodium butyrate (SB), trichostatin A (TSA), and apicidin (AP). Importantly, our RT-PCR data and alkaline phosphatase assays indicate that VPA helps to maintain the self-renewal activity of mESCs under hypoxia. Taken together, these results suggest that VPA may block the early differentiation of mESCs under hypoxia via the destabilization of HIF-$1{\alpha}$.

• 생명과학회지
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• 제29권1호
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• pp.105-111
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• 2019

Histone deacetylase (HDAC)-6은 전사조절 및 세포질 내 다양한 단백질들과의 상호작용을 통하여 난소암의 유발에 관여한다. 최근, HDAC-6을 표적으로 하는 특이적 억제제를 활용하여 암세포의 신호전달경로를 차단함으로써 새로운 항암제로서의 개발을 모색하고 있다. 특히, 난소암 치료를 위한 화학요법에서는 생식세포에 미치는 영향이 하나의 중요한 난제가 될 수 있다. 그러나, HDAC-6 억제제가 난소암세포 이외의 생식세포에 미치는 영향에 대한 연구는 아직 미흡한 실정이다. 따라서, 본 연구에서는 HDAC-6 억제제의 하나인 tubastatin A (TubA)가 생쥐의 난소 내 미성숙 난자에 미치는 영향을 RNA sequencing 분석을 통하여 검증하였다. 이러한 유전자 집합을 이용한 통계적 분석은 기존의 개별 유전자분석의 한계를 극복하여 대량의 생물학적 정보를 산출함으로써, 세포 내 신호전달경로와 같은 복잡한 생물학적 변화상태를 보다 더 광범위하고 민감하게 파악할 수 있을 뿐만 아니라 의미있는 결과의 도출에 도움을 줄 수 있다. Gene set enrichment analysis (GSEA) 결과, 세포주기와 감수분열의 조절 및 진행에 관여하는 gene sets의 발현이 germinal vesicle (GV)과 비교하여 TubA 처리군에서 대부분 감소되었다. 또한, ingenuity pathway analysis (IPA)를 통하여 TubA가 난모세포 내 p53 및 pRB의 발현을 증가시키고 CDK4/6 및 cyclin D의 발현을 감소시킬 뿐만 아니라, G2/M 단계의 DNA checkpoint 조절에 관여하는 유전자들의 발현을 증가시킴을 확인하였다. 이러한 결과는 TubA가 난소 내 미성숙 난자의 DNA 손상과 세포주기 관련 신호전달경로 유전자들의 발현변화를 유도함으로써, 세포주기의 중지와 세포사멸을 초래할 수 있음을 제시한다. 따라서, 특히 생식주기 이전의 난소암을 표적으로 하는 HDAC-6 억제제를 이용한 항암제의 개발에 있어 난소 내 미성숙 난자의 정상적인 성장과 발달을 위한 대안적 고려가 필요할 것으로 사료된다.