• 제목/요약/키워드: Glycosyl hydrolase family 5

검색결과 44건 처리시간 0.016초

Alkaliphilic Endoxylanase from Lignocellulolytic Microbial Consortium Metagenome for Biobleaching of Eucalyptus Pulp

  • Weerachavangkul, Chawannapak;Laothanachareon, Thanaporn;Boonyapakron, Katewadee;Wongwilaiwalin, Sarunyou;Nimchua, Thidarat;Eurwilaichitr, Lily;Pootanakit, Kusol;Igarashi, Yasuo;Champreda, Verawat
    • Journal of Microbiology and Biotechnology
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    • 제22권12호
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    • pp.1636-1643
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    • 2012
  • Enzymatic pre-bleaching by modification of pulp fibers with xylanases is an attractive approach to reduce the consumption of toxic bleaching chemicals in the paper industry. In this study, an alkaliphilic endoxylanase gene was isolated from metagenomic DNA of a structurally stable thermophilic lignocellulose-degrading microbial consortium using amplification with conserved glycosyl hydrolase family 10 primers and subsequent genome walking. The full-length xylanase showed 78% sequence identity to an endo-${\beta}$-1,4-xylanase of Clostridium phytofermentans and was expressed in a mature form with an N-terminal His6 tag fusion in Escherichia coli. The recombinant xylanase Xyn3F was thermotolerant and alkaliphilic, working optimally at $65-70^{\circ}C$ with an optimal pH at 9-10 and retaining >80% activity at pH 9, $60^{\circ}C$ for 1 h. Xyn3F showed a $V_{max}$ of 2,327 IU/mg and $K_m$ of 3.5 mg/ml on birchwood xylan. Pre-bleaching of industrial eucalyptus pulp with no prior pH adjustment (pH 9) using Xyn3F at 50 IU/g dried pulp led to 4.5-5.1% increase in final pulp brightness and 90.4-102.4% increase in whiteness after a single-step hypochlorite bleaching over the untreated pulp, which allowed at least 20% decrease in hypochlorite consumption to achieve the same final bleaching indices. The alkaliphilic xylanase is promising for application in an environmentally friendly bleaching step of kraft and soda pulps with no requirement for pH adjustment, leading to improved economic feasibility of the process.

Thermotoga neapolitana 유래 내열성 4-알파-글루칸전이효소의 효소적 특성 (Enzymatic Characterization of a Thermostable 4-α-Glucanotransferase from Thermotoga neapolitana)

  • 최경화;서자영;김지은;차재호
    • 생명과학회지
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    • 제21권2호
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    • pp.221-226
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    • 2011
  • Thermotoga neapolitana 유래 내열성 4-알파-글루칸전이효소(MgtA)가 산업적 응용성을 지닌 싸이클로아밀로스를 생산할 수 있는지를 검사하기 위하여 그 유전자를 클로닝하고 대장균에서 발현시켰다. MgtA는 HiTrap Q와 Sephacryl S-200 분배 크로마토그래피를 이용하여 순수한 형태로 정제되었으며, SDS-PAGE를 통하여 분자량이 약 52 kDa으로 아미노산서열로부터 계산된 분자량과 일치하였다. 효소활성의 최적 pH와 온도는 6.5와 $85^{\circ}C$였으며 알파1,4결합을 갖는 글루칸의 1,4결합을 효율적으로 가수분해함과 동시에 작은 크기의 올리고당을 말토덱스트린에 전이하는 전이활성을 가지고 있었다. 그러나 플루란, 글리코겐 및 1,4결합 이외의 다른 알파결합을 갖는 글루칸에는 활성을 나타내지 않았다. MgtA는 말토트리오스를 말토올리고당으로 전환할 수 있는 능력에서 그렇지 못한 Thermotoga maritima 의 효소와 구별할 수 있었으며, 반응 후 glucoamylase의 처리결과로부터 그 전이산물이 싸이클로아밀로스 대신에 긴 연쇄상의 말토올리고당을 생산하는 효소로 확인할 수 있었다.

Cloning and Expression of Thermostable $\beta$-Glycosidase Gene from Thermus filiformis Wai33 A1 in Escherichia coli and Enzyme Characterization

  • Kang, Sang-Kee;Cho, Kwang-Keun;Ahn, Jong-Kun;Kang, Seung-Ha;Han, Kyung-Ho;Lee, Hong-Gu;Choi, Yun-Jaie
    • Journal of Microbiology and Biotechnology
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    • 제14권3호
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    • pp.584-592
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    • 2004
  • A thermostable $\beta$-glycosidase gene, tfi $\beta$-gly, was cloned from the genomic library of Thermus filiformis Wai33 A1. ifi $\beta$-gly consists of 1,296 bp nucleotide sequence and encodes a polypeptide of 431 amino acids. It shares a strong amino acid sequence similarity with the $\beta$-glycosidases from other Thermus spp. belonging to the glycosyl hydrolase family 1. In the present study, the enzyme was overexpressed in Escherichia coli BL21 (DE3) using the pET21b(+) vector system. The recombinant enzyme was purified to homogeneity by heat treatment and a $Ni^{2+}$-affinity chromatography. Polyacrylamide gel electrophoresis (PAGE) showed that the recombinant Tfi $\beta$-glycosidase was a monomeric form with molecular mass of 49 kDa. The temperature and pH range for optimal activity of the purified enzyme were 80- $90^{\circ}C$ and 5.0-6.0, respectively. Ninety-three percent of the enzyme activity was remained at $70^{\circ}C$ after 12 h, and its half-life at $80^{\circ}C$ was 6 h, indicating that Tfi $\beta$-glycosidase is highly thermostable. Based on its K_m$, or $K_{cat}K_m$, ratio, Tfi $\beta$-glycosidase appeared to have higher affinity for $\beta$-D-glucoside than for $\beta$-D-galactoside, however, $K_{cat} for \beta$-D-galactoside was much higher than that for $\beta$-D-glucoside. The activity for lactose hydrolysis was proportionally increased at $70^{\circ}C$ and pH 7.0 without substrate inhibition until reaching 250 mM lactose concentration. The specific activity of Tfi TEX>$\beta$-glycosidase on 138 mM lactose at $70{^\circ}C$ and pH 7.0 was 134.9 U/mg. Consequently, this newly cloned enzyme appears to have a valuable advantage of conducting biotechnological processes at elevated temperature during milk pasteurization in the production of low-lactose milk.

반응 표면 분석법을 사용한 Bacillus subtilis NC1 유래 cellulase 생산 배지 최적화 (Optimization of a Medium for the Production of Cellulase by Bacillus subtilis NC1 Using Response Surface Methodology)

  • 양희종;박창수;양호연;정수지;정성엽;정도연;강대욱;문자영;최낙식
    • 생명과학회지
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    • 제25권6호
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    • pp.680-685
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    • 2015
  • 이전에 토양으로부터 cellulase와 xylanase 생산 균주로 단리하였다. 단리한 균주 유래의 16S rRNA 유전자 및 API 50 kit를 분석한 결과 Bacillus subtilis와 약 99.5%의 높은 상동성을 보였기에 본 균주를 B. subtilis NC1으로 명명하였다. Bacillus subtilis NC1 균주 유래 cellulase와 xylanase 유전자를 cloning 하여 유전자 배열을 규명하였다. 또한, 두 효소의 아미노산 배열을 이용하여 상동성을 검토한 결과 cellulase는 Glycoside hydrolase family (GH) 5 그리고 xylanase는 GH30에 속하는 효소임을 밝혔다. 본 연구에서는 B. subtilis NC1 의 cellulase 생산을 위한 배지성분의 최적 농도를 결정하기 위해 중심합성계획법(central composite design, CCD)을 기반으로 한 반응표면 분석법(Response Surface Methodology) 을 수행하였다. 세가지 독립변수로는 tryptone, yeast extract, 그리고 NaCl이 조사되었다. 반응값에 대하여 분산분석을 실시한 결과 결정계수(R2)는 0.96이었으며 전체 모델에 대한 유의확률이 0.0001로 매우 높은 유의성을 지님을 확인하였다. 반응표면분석법을 통하여 얻어진 B. subtilis NC1의 cellulase 활성을 위한 최적화 배지의 각 변수 농도는 tryptone 2.5%, yeast extract 0.5%, 그리고 NaCl 1.0%로 예측 되었다. 최적화 배지에서의 B. subtilis NC1의 cellulase 활성을 검증한 최적화를 실시하기 이전인 대조구의 cellulase 활성 0.5U/ml와 비교하면 24% 활성이 향상된 0.62U/ml의 높은 활성을 보였다.