• 제목/요약/키워드: Genus identification

검색결과 565건 처리시간 0.024초

한국 남해에서 출현한 옥돔과(Malacanthidae) 어류 1 미기록종 Hoplolatilus chlupatyi 치어의 형태기재 및 분자동정 (Morphological description and molecular identification of juvenile of the previously unrecorded species Hoplolatilus chlupatyi (Malacanthidae) in the South Sea of Korea)

  • 김이정;유효재;김진구
    • 수산해양기술연구
    • /
    • 제56권4호
    • /
    • pp.316-321
    • /
    • 2020
  • A single juvenile malacanthid specimen (Hoplolatilus chlupatyi) was collected from the South Sea of Korea and identified by DNA barcoding. This species is readily distinguished from other malacanthid species in having well developed rostral spine and elongated spines in the posttemporal and preopercle. A molecular analysis based on mitochondrial DNA COI sequences showed that this species is matched to adult H. chlupatyi (genetic distance = 0.005). Therefore, this is the first record of H. chlupatyi in Korea. We propose new Korean names, "Mu-ji-gae-og-dom-sog" for the genus Hoplolatilus and "Mu-ji-gae-og-dom" for the species H. chlupatyi.

A Study on the Fine Structure of the Marine Diatoms of Korean Coastal Waters - Genus Thalassiosira 3

  • Lee, Jin-Hwan;Park, Joon-Sang
    • ALGAE
    • /
    • 제23권3호
    • /
    • pp.187-199
    • /
    • 2008
  • A study on the fine structure of the marine diatom Thalassiosira has been carried out during the periods from January 2007 to March 2008 in Korean coastal waters. As the third series of the Thalassiosira species, a fine structure, description, distribution and taxonomic remarks of the six Thalassiosira species were observed by means of light microscope and scanning electron microscope. The critical features of Thalassiosira species were a shape of external tubes of marginal strutted processes and labiate process. Six species showed each different shape of external tubes, marginal strutted processes and labiate process. The shape of external tube was divided into five types: T shape of Thalassiosira curviseriata, small-rounded shape of T. lundiana, double-layer form and flame shape of T. nordenskioeldii, tulip shape of T. punctigera and tooth-shape of T. tenera. This external character may be able to key character for positive identification of the Thalassiosira species. Of these Thalassiosira lundiana, T. minuscula and T. tenera were new records for Korean coastal waters.

Random Amplified Polymorphic DNA (RAPD) Identification of Genetic Variation in Chlorella species

  • CHO Jung Jong;KIM Yong-Tae;HUR Sung Bum;KIM Young Tae
    • 한국수산과학회지
    • /
    • 제29권6호
    • /
    • pp.761-769
    • /
    • 1996
  • The random amplified polymorphic DNA (RAPD) technique was used to characterize 18 reference strains of microalgae, mostly Chlorella species, collected from various localities around Korea peninsular. Eighteen strains consist of four genera of the family marine Chlorella from 12 samples, two genera of fresh water Chlorella from three samples, and three genera on Nannochloris. Twenty 10-mer anonymous primers were screened for amplification of genomic DNA extracted from samples using the CTAB extraction method. Nineteen of these oligonucleotide primers were positive or band producing. Three of 20 random primers (OPA 10, OPA 12, and OPA 18) resulted in both clear band and a high degree of reproducibility and showed some potential to be used to discriminate individual samples of both genetically hetero-and homogeneous populations, in determining phylogenetic relationships between species within a genus and developing individual fingerprints for each samples.

  • PDF

Phylogenetic Analysis of Phyllospadix iwatensis Based on Nucleotide Sequences Encoding 18S rRNA and ITS-1

  • Kim, Jong-Myoung;Choi, Chang-Geun
    • Fisheries and Aquatic Sciences
    • /
    • 제13권4호
    • /
    • pp.272-277
    • /
    • 2010
  • Seagrasses are marine angiosperms of ecological importance in providing shelter and food to aquatic species as well as maintaining the carbon cycle on earth. Phyllospadix iwatensis is a seagrass of the family Zosteraceae and is distributed along the eastern coast of Korea. The nucleotide sequences of P. iwatensis nuclear genes encoding 18S ribosomal RNA (rRNA) and internal transcribed spacer-1 (ITS-1) were determined for molecular phylogenetic analysis. Genomic DNA was isolated from P. iwatensis and used for PCR amplification of 18S rRNA and ITS-1. Examination of the 18S rRNA sequence of P. iwatensis showed a close (99% similarity) relationship to Zostera noltii, another genus of Zosteraceae, but a distant (84% similarity) evolutionary relationship to other macroalgal Laminariales species. Further discrepancies found in ITS-1 nucleotide sequences between closely related species indicate that the sequence information could be used for species identification.

Molecular Characterization of Fusarium proliferatum Causing Leaf Blight Symptoms on Chinese chive (Allium tuberosum) in Korea

  • Kim, Kyong-Han;Lee, Seung-Yeol;Back, Chang-Gi;Jung, Hee-Young
    • Current Research on Agriculture and Life Sciences
    • /
    • 제31권4호
    • /
    • pp.245-249
    • /
    • 2013
  • In 2008, leaf blight symptoms were observed on several Chinese chive farms in Sangju. The Pathogenicity of the isolate was confirmed by artificial inoculation, where the pathogen exhibited a strong pathogenicity toward healthy plants. Morphological classification identified the isolate as from the Fusarium genus. For further analysis, PCR and phylogenetic classification were performed with ITS region and 28S rRNA gene which are commonly used for fungal identification. However, the results provided a poor resolution. To solve this problem, we analyzed translation elongation factor 1-alpha (TEF-$1{\alpha}$) gene. The analyzed results using TEF-$1{\alpha}$ gene indicated that the isolate was F. proliferatum. Therefore, it is assumed that TEF-$1{\alpha}$ gene is important when Fusarium sp. was identified using molecular classification method.

NAG Vibrio의 검사에 관한 소고 (Study on the Identification Methods of the Non-agglutinating Vibrio)

  • 이명원
    • 환경위생공학
    • /
    • 제2권2호
    • /
    • pp.61-67
    • /
    • 1987
  • The genus Vibrio contains some of the most important intestinal pathogens of humans, including Vibrio cholerae, the cause of epidemic Asiatic cholera. A group of organisms which have been reffered to as the non-agglutinating vibrio (NAG) do not agglutinate in the Vibrio cholerae 0 group 1 antisera, but are indistinguishable from the 0-1 group both chemically and genetically. Non-O-l Vibrio cholerae can cause isolated as well as focal outbreaks of diarrhea, but the volume of fluid loss does not approach that of classic cholera, and the disease is usually self-limiting. These free-living organisms are found world-widely distributed in the environment including sewage, contaminated water, estuaries, seafood and animals. These strains involved in several cases were isolated from the environment and some patients of diarrhea, and a few epidemiologic reports indicated the wide distribution of the strains throughout the country, giving an attention to the role the organisms may play in an outbreak of diarrhea in Korea. More research on the epidemiology, serologic typing and virulence of the group of organisms, should be, therefore, done to obtain a complete understanding of their role in human disease.

  • PDF

카네이션의 시설재배에서 길항성 세균을 이용한 Fusarium Wilt 의 생물학적 방제 (Biological Control of Fusarium Wilt of Carnation Plants by Antagonistic Microorganism in Greenhouse)

  • 조정일;조자용
    • 한국유기농업학회지
    • /
    • 제12권2호
    • /
    • pp.183-196
    • /
    • 2004
  • This study was carried out to screen and select the effects of antifungal bacterial strains which inhibit the growth of plant pathogen, Fusarium oxysporum(fusarium wilt) occurred in carnation plants in greenhouse. We isolated an effective bacterial strains and investigated into the antifungal activity of the antagonistic microorganism and it's identification. Twenty bacterial strains which strongly inhibited Fusarium oxysporum were isolated from roots of carnation plants and the soil in greenhouse, and the best antifungal bacteria designated as C121, was finally selected. Antagonistic bacterial strain, C121 was identified to be the genus Bacillus sp. based on the morphological, biochemical and cultural characterizations. The Bacillus sp. C121 showed 58.1% of antifungal activity against the growth of Fusarium oxysporum. By the bacterialization of the cultural broth and the heat bacterialization culture filtrate of it, Bacillus sp. C121 was shown 92.1% and 21.0% of antifungal activity, respectively.

  • PDF

Five Species of Syrphidae (Insecta: Diptera) Newly Recorded in Korea

  • Suk, Sang-Wook;Choi, Deuk-Soo;Han, Ho-Yeon
    • Animal Systematics, Evolution and Diversity
    • /
    • 제31권4호
    • /
    • pp.257-265
    • /
    • 2015
  • In Korean Peninsula, a total of 175 syrphid species are currently known. As a result of ongoing systematic study of the family Syrphidae, we have discovered the following five species for the first time in the Korean Peninsula: Mallota rossica Portschinsky, 1877, M. shatalkini Mutin, 1999, Sphiximorpha rachmaninovi (Violovitsh, 1981), Volucella bivitta Huo et al., 2007, and V. inanoides Hervé-Bazin, 1923. Among these taxa, Sphiximorpha Rondani, 1850, is the genus recorded for the first time in Korea. In total, three subfamilies, 16 tribes, 70 genera, and 180 species are now officially recognized for the Korean syrphid fauna. In order to facilitate their identification, we here provide specific diagnoses and color photographs for the species listed.

Six New Records of Springtails (Collembola) from North Korea

  • Danyi, Laszlo;Park, Kyung Hwa
    • Animal Systematics, Evolution and Diversity
    • /
    • 제32권2호
    • /
    • pp.123-132
    • /
    • 2016
  • Six species of springtails (Collembola) are reported for the first time from North Korea: Pachyotoma takeshitai (Kinoshita, 1916), Folsomia bisetosa Gisin, 1953 and Agrenia agilis Fjellberg, 1986 of Isotomidae, Entomobrya sibirica Stach, 1963 and Willowsia buski (Lubbock, 1870) of Entomobryidae, and Ptenothrix setosa (Krausbauer, 1898) of Dicyrtomidae. The genus Pachyotoma Bagnall, 1949 is mentioned for the first time from the Korean Peninsula. In order to facilitate the identification of these species, illustrations and short diagnoses are provided and the poorly known P. takeshitai is described in detail. Ptenothrix setosa and E. sibirica link the Korean peninsular fauna with Central Asia, P. takeshitai shows the zoogeographical connection of the Korean Peninsula with the Japanese Islands and A. agilis has a trans-pacific distribution. Folsomia bisetosa is an interesting circumpolar element in the Korean fauna while W. buski is a subcosmopolitan species.

온실재배 토마토에서 발생하는 위조병의 미생물학적 제어 (Biological Control of Fusarium Wilt of Tomato Plants by Antagonistic Microorganism in Greenhouse)

  • 조정일;조자용
    • 한국유기농업학회지
    • /
    • 제11권4호
    • /
    • pp.61-74
    • /
    • 2003
  • This study was conducted to screen the antagonistic bacteria which inhibit the growth of plant pathogen, fusarium wilt(Fusarium oxysporum) occurred in tomato plants in greenhouse. We isolated an effective bacterial strains and investigated into the antifungal activity of the antagonistic microorganism and it’s identification. Ten bacterial strains which strongly inhibited Fusarium oxysporum were isolated from the nature, and the best antagonistic bacterial strain designated as KC175, was selected. The antagonistic strain KC175 was identified to be the genus Bacillus sp. based on the morphological and biochemical characterization. The Bacillus sp. KC175 showed 58.2% of antifungal activity against the growth of Fusarium oxysporum. By the bacterialization of the culture broth and the heat bacterialization culture filtrate of it, Bacillus sp. KC175 showed 91% and 18% of antifungal activity, respectively.

  • PDF