• Title/Summary/Keyword: Genetic factor

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Evaluation of Gene Expression Changes of Serotonin Receptors, 5-HT3AR and 5-HT2AR as Main Stress Factors in Breast Cancer Patients

  • Hejazi, Seyed Hesam;Ahangari, Ghasem;Pornour, Majid;Deezagi, Abdolkhaleagh;Aminzadeh, Saeed;Ahmadkhaniha, Hamid Reza;Akbari, Mohamad Esmail
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권11호
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    • pp.4455-4458
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    • 2014
  • Breast cancer is a serious and potentially lethal multi-factor disease among 40-50 aged women in both developed and developing countries. Also, various studies have pointed to roles of neurotransmitters like serotonin in development of cancers, through action on various types of receptors. This study was conducted to evaluate serotonin receptor (5HT2AR and 5HT3AR) genes expression in peripheral blood mononuclear cells (PBMCs) of breast cancer patients in comparison with the healthy people and in the MCF7 cell line. Peripheral blood samples were obtained from 30 patients and 30 healthy individuals. Total RNA was extracted from PBMCs and MCF-7 cells. and 5HT2AR and 5HT3AR were detected by RT-PCR techniques. Finally, serotonin receptor gene expression variation in breast cancer patients and MCF-7 cells were determined by real time-PCR. This latter indicated significant promotion in expression of 5HT3AR and 5HT2AR in PBMCs in breast cancer patients but expression of 5HT2AR in the MCF-7 cell line was significantly decreased. In conclusion, after performing complimentary tests, determine of gene expression changes in serotonin receptors (5HT2AR and 5HT3AR) may be useful as a new approach in treatment of breast cancer based on use of antagonists.

Morphological and RAPD Variation of Phragmites australis along Salinity Gradient in the Wetlands of the Downstream of Yellow River, China

  • Zhang, Shuping;Wang, Renqing;Qj, Xinshan;Guo, Weihua;Song, Baimin
    • The Korean Journal of Ecology
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    • 제27권1호
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    • pp.35-41
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    • 2004
  • Phragmites australis is the dominant and constructive species among plant communities in the wetlands of the downstream of Yellow River, China. Its morphological characters were high variable in different habitats. Studies on Morphological and RAPD variation of 15 P. australis populations from this region showed that soil salinity was the dominant ecological factor that affected the morphological characters of P. australis. The basal diameter, height, leaf length, leaf width, internode length, internode accounts, panicle length were negatively related to salinity. 194 loci were amplified by RAPD, of which 9 loci was highly negative-related to salinity, and showed a tendency to prefer the habitats with fresh water. 4 loci were positively related to the salinity, and showed a tendency to prefer the salinized habitats. Most loci were neutral to salinity. The morphological and genetic characters of BZH were special, and the speciality should not be determined by salinity. The morphological characters were affected by genetic information and environment. The morphological characters should change gradually and continuously along environmental gradient under plasticity, but should changed continuously or not in genetic control. The relevancies among quantitive characters, ecological factors and genetic variation in natural populations still will still be a focus and difficulty of ecological genetics of P. australis in the future.

다형질 Animal model에 의한 9개월령 한국산 전복 2 아종의 성장관련형질에 대한 유전모수 추정 (Estimation of Genetic Parameters for Growth-Related Traits in 9-month Old of Two Korean Abalone Subspecies, Haliotis discus hannai and H. discus discus, by Using Multiple Traits of Animal Model)

  • 최미경;양상근;원승환;박철지;한석중;여인규
    • 한국수산과학회지
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    • 제42권6호
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    • pp.591-599
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    • 2009
  • Genetic parameters for growth-related traits were estimated in 9-month old of two Korean abalone subspecies, Haliotis discus hannai and H. discus discus, using multiple traits of animal model. The data were collected from the records of 3,504 individuals produced from 16 sires and 17 dams in H. discus hannai and 821 individuals produced from 3 sires and 4 dams in H. discus discus, which was evaluated at the Bukjeju branch, NFRDI, from May 20, 2004 to February 14, 2005. The heritability estimates obtained from restricted maximum likelihood (REML) method range from 0.29 to 0.31 for three growth traits (shell length, shell width and body weight) in H. discus hannai and from 0.22 to 0.28 in H. discus discus, respectively. The heritabilities for shell shape and condition factor were lower than others of growth traits such as ranging from 0.03 to 0.24 in H. discus hannai and from 0.06 to 0.11 in H. discus discus, respectively. Genetic and phenotypic correlations were >0.91 between shell parameters and weight in two abalone subspecies, respectively, indicating that breeding for weight gains could be successfully achieved by selecting for shell length.

Geographic Variation in Survival Rate and Height Growth of Pinus densiflora S. et Z. in Korea

  • Kim, In-Sik;Ryu, Keun-Ok;Song, Jeong-Ho;Kim, Tae-Su
    • 한국산림과학회지
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    • 제94권2호통권159호
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    • pp.73-81
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    • 2005
  • This study was conducted to examine the geographic variation among provenances of Pinus densiflora in survival rate and height growth at four test plantations (Jungsun, Chungju, Naju, and Jeju). The plantations were parts of the eleven provenance trials of Pinus densiflora established by Korea Forest Research Institute in 1996. The survival rate and height growth were significantly different among test plantations at $p{\leq}0.01$. Latitude and longitude of test plantation were negatively correlated with survival rate and height growth. On the other hand, annual mean temperature, mean temperature (Nov.~Feb.), extremely low temperature (Dec.~Feb.), and annual mean growing days of test plantation were positively correlated with these two. The relationships between growth variables and geographic variables were analysed with canonical correlation analysis. A considerable amount of variation in survival rate and height growth was explained by latitude, annual mean growing days, extremely low temperature (Dec.~Feb.) and extremely high temperature (Nov.~Feb.) of provenances. It is estimated that up to 47.1% and 67.4% of the genetic variability in survival rate and height growth was attributable to the environmental variability of the provenances, respectively. The response surface curve of survival rate and height growth was plotted against latitude and longitude to examine growth performance of provenances for each test site. Generally, the local provenances showed better survival rate and height growth.

Genotype distribution and gene frequency of angiotensin I-converting enzyme in Korean population

  • Yang, Young-Mok;Park, Jong-Hwan;Moon, Eon-Soo
    • Journal of Genetic Medicine
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    • 제1권1호
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    • pp.17-22
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    • 1997
  • The angiotensin converting enzyme (ACE) is a key component of the renin-angiotensin system thought to be important in the pathogenesis of hypertension and cardiovascular diseases. Deletion polymorphism in the ACE gene may be a risk factor for myocardial infarction. The insertion/deletion (I/D) polymorphism of the ACE detected by PCR analysis appears to be associated with hypertension in Koreans and its nucleotide was subcloned into T-vector and its nucleotide sequences were determined. We also examined an association between hypertension and genetic variance of ACE. We identified the angiotensin I-converting enzyme genotype in 127 hypertensive and 189 normotensive Korean subjects. The distribution of ACE genotype II, ID, DD were 39.2%, 40.2%, 20.6% respectively and the frequency for ACE alleles I and D were 0.593 and 0.407, respectively in all subjects. The frequency of D allele in Korean males is higher than that of Korean females (male; 0.438 : female; 0.267), and the frequency of I allele in Korean females is higher than that of Korean males (female; 0.733 : male; 0.562). Genotype distributions of angiotensin I-converting enzyme genes in Korean normal adult population were different from that of Caucasians (P<0.001). There were no significant differences in genotype frequency between the hypertensive control group (n=127) and the normotensive group (n=189). We observed significant differences of ACE genotype distribution between the male group and the female group in total (P=0.001) and in hypertensive Korean subjects (P=0.013).

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Structural investigation of ginsenoside Rf with PPARγ major transcriptional factor of adipogenesis and its impact on adipocyte

  • Siraj, Fayeza Md;Natarajan, Sathishkumar;Huq, Md Amdadul;Kim, Yeon Ju;Yang, Deok Chun
    • Journal of Ginseng Research
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    • 제39권2호
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    • pp.141-147
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    • 2015
  • Background: Adipocytes, which are the main cellular component of adipose tissue, are the building blocks of obesity. The nuclear hormone receptor $PPAR{\gamma}$ is a major regulator of adipocyte differentiation and development. Obesity, which is one of the most dangerous yet silent diseases of all time, is fast becoming a critical area of research focus. Methods: In this study, we initially aimed to investigate whether the ginsenoside Rf, a compound that is only present in Panax ginseng Meyer, interacts with $PPAR{\gamma}$ by molecular docking simulations. After we performed the docking simulation the result has been analyzed with several different software programs, including Discovery Studio, Pymol, Chimera, Ligplus, and Pose View. All of the programs identified the same mechanism of interaction between $PPAR{\gamma}$ and Rf, at the same active site. To determine the drug-like and biological activities of Rf, we calculate its absorption, distribution, metabolism, excretion, and toxic (ADMET) and prediction of activity spectra for substances (PASS) properties. Considering the results obtained from the computational investigations, the focus was on the in vitro experiments. Results: Because the docking simulations predicted the formation of structural bonds between Rf and $PPAR{\gamma}$, we also investigated whether any evidence for these bonds could be observed at the cellular level. These experiments revealed that Rf treatment of 3T3-L1 adipocytes downregulated the expression levels of $PPAR{\gamma}$ and perilipin, and also decreased the amount of lipid accumulated at different doses. Conclusion: The ginsenoside Rf appears to be promising compound that could prove useful in antiobesity treatments.

시간 제한 조건을 고려한 유전 알고리즘 기반 다수 무인기 임무계획기법 (Genetic algorithm based multi-UAV mission planning method considering temporal constraints)

  • 정병민;장대성;황남웅;김준원;최한림
    • 항공우주시스템공학회지
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    • 제17권2호
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    • pp.78-85
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    • 2023
  • 다수 무인기 체계에서 임무할당은 임무 수행 능력을 결정하는 중요한 요인이다. 본 논문은 유전 알고리즘에 기반한 임무계획기법을 제안한다. 본 기법을 통해 제한 조건을 만족하면서, 임무 완료 시간을 최소화하는 해를 구할 수 있다. 임무 할당 문제의 최적해를 구하기 위해서는 계산량이 많이 필요하므로 본 기법이 해를 구하는 대안이 될 수 있다. 본 기법은 현실 세계의 다양한 종류의 무인기, 임무, 제한 조건을 고려하였다. 제안된 기법은 각 무인기의 임무 시퀀스와 제한 조건 만족을 위한 임무 별 대기 시간을 도출한다. 다양한 수치적 시뮬레이션 결과를 통해 임무 종료 시간을 최소화하는 임무계획 기법의 성능을 확인하였다.

A Single Nucleotide Polymorphism in Transforming Growth Factor-$\beta$ type II Receptor of the Rat

  • Ryu, Doug-Young
    • Toxicological Research
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    • 제16권1호
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    • pp.59-61
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    • 2000
  • A single nucleotide polymorphism in the transforming growth factor-$\beta$ type II receptor (TGE$\beta$RII) gene of the rat was studied. TGF$\beta$RII is a tumor suppressor that is frequently inactivated by mutation in human colon cancers. A novel nucleotide polymorphism of G to A(or A to G), which causes a silent mutation at codon 129, was found in G:C rich sequence in the TGF$\beta$RII gene of Sprague-Dawley rats. The results suggest that genetic polymorphism occures without a strain of the laboratory animal.

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아동기 주의력결핍 과잉행동장애의 유해환경인자 (Harmful Environmental Factors Leading to Attention-Deficit Hyperactivity Disorder)

  • 권호장;하미나;김붕년;임명호
    • Journal of the Korean Academy of Child and Adolescent Psychiatry
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    • 제27권4호
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    • pp.267-277
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    • 2016
  • Attention-deficit hyperactivity disorder (ADHD) is a common, childhood-onset, neuropsychiatric disorder with an estimated prevalence of 2-7.6% in Korean children. Although the etiology of ADHD is not well understood, evidence from genetic factor and environmental factor studies suggests that ADHD results from a gene environmental interaction. In the current study, we reviewed the evidence for and clinical implications of the hypothetical roles of organophosphate pesticides, organochlorine pesticides, polychlorinated biphenyls, phthalate, bisphenol, polyfluoroalkyl chemicals, polycyclic aromatic hydrocarbons, mercury, lead, arsenic, cadmium, manganese, tobacco, alcohol as harmful risk factors in the development of ADHD.

Association of Hepatocyte Nuclear Factor-$4{\alpha}$ (HNF-$4{\alpha}$) Polymorphisms (rs1884614) with Type 2 Diabetes in Korean Population

  • ;유민
    • 대한의생명과학회지
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    • 제15권1호
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    • pp.101-103
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    • 2009
  • The hepatocyte nuclear factor-$4{\alpha}$ (HNF-$4{\alpha}$), transcription factor involved in the regulation of serum lipid and glucose levels, has recently been reported to be associated with type 2 diabetes. Therefore, we investigated the genotype for the rs1884614 of HNF-$4{\alpha}$ gene in Korean population and compared genotype of patients with control group. 100 patients (Male 63, Female 37), who previously underwent type 2 diabetes (T2DM) and 100 controls (Male 36, Female 64) participated in this study. According to our present study there was no association between rs1884614 polymorphism in HNF-$4{\alpha}$ gene and T2DM in Koreans although other reports showed that HNF-$4{\alpha}$ polymorphisms might be associated with the pathogenesis of T2DM in Pima Indians et al. We assume that this finding should contribute to understanding of type 2 diabetes in Korean population in detail at genetic level.

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