• Title/Summary/Keyword: Genetic Responses

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Prediction of plasma etching using genetic-algorithm controlled backpropagation neural network

  • Kim, Sung-Mo;Kim, Byung-Whan
    • 제어로봇시스템학회:학술대회논문집
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    • 2003.10a
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    • pp.1305-1308
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    • 2003
  • A new technique is presented to construct a predictive model of plasma etch process. This was accomplished by combining a backpropagation neural network (BPNN) and a genetic algorithm (GA). The predictive model constructed in this way is referred to as a GA-BPNN. The GA played a role of controlling training factors simultaneously. The training factors to be optimized are the hidden neuron, training tolerance, initial weight magnitude, and two gradients of bipolar sigmoid and linear functions. Each etch response was optimized separately. The proposed scheme was evaluated with a set of experimental plasma etch data. The etch process was characterized by a $2^3$ full factorial experiment. The etch responses modeled are aluminum (A1) etch rate, silica profile angle, A1 selectivity, and dc bias. Additional test data were prepared to evaluate model appropriateness. The GA-BPNN was compared to a conventional BPNN. Compared to the BPNN, the GA-BPNN demonstrated an improvement of more than 20% for all etch responses. The improvement was significant in the case of A1 etch rate.

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Selective Activation of Mitogen-Activated Protein (MAP) Kinase During the Progression of Renal Disease

  • Park, Sang-Joon;Jeong, Kyu-Shik;Jeong, Tae-Sook;Bok, Song-Hae;Lee, Cha-Soo
    • Proceedings of the Korean Society of Veterinary Pathology Conference
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    • 2000.09a
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    • pp.19-19
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    • 2000
  • Most renal diseases progress by consecutive cell responses such as hypertrophy, hyperplsia, proliferation, defferentiation, sclerosis, fibrosis and other cellular degenerative process. These cellular responses are mediated by the activation of various mitogens such as vasoconstrictors, growth factors, hormone, genotoxins and cytokines through mechanical, hemodynamic, immunological injury as well as metabolic abnormality. (omitted)

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Role of ginsenosides, the main active components of Panax ginseng, in inflammatory responses and diseases

  • Kim, Ji Hye;Yi, Young-Su;Kim, Mi-Yeon;Cho, Jae Youl
    • Journal of Ginseng Research
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    • v.41 no.4
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    • pp.435-443
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    • 2017
  • Panax ginseng is one of the most universally used herbal medicines in Asian and Western countries. Most of the biological activities of ginseng are derived from its main constituents, ginsenosides. Interestingly, a number of studies have reported that ginsenosides and their metabolites/derivatives-including ginsenoside (G)-Rb1, compound K, G-Rb2, G-Rd, G-Re, G-Rg1, G-Rg3, G-Rg5, G-Rh1, G-Rh2, and G-Rp1-exert anti-inflammatory activities in inflammatory responses by suppressing the production of proinflammatory cytokines and regulating the activities of inflammatory signaling pathways, such as nuclear factor-${\kappa}B$ and activator protein-1. This review discusses recent studies regarding molecular mechanisms by which ginsenosides play critical roles in inflammatory responses and diseases, and provides evidence showing their potential to prevent and treat inflammatory diseases.

Estimation of Genetic Correlations and Selection Responses for Carcass Traits between Ultrasound and Real Carcass Measurements in Hanwoo Cows

  • Son, Jihyun;Lee, Deukhwan
    • Journal of Animal Science and Technology
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    • v.55 no.6
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    • pp.501-508
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    • 2013
  • This study was conducted to determine genetic correlations among carcass traits measured by ultrasound and real carcass measurements and to estimate indirect selection responses for real carcass traits based on ultrasound measurements in Hanwoo cows. To accomplish this, 22,080 ultrasound measurement records from 17,926 cows collected from 2001 to 2012 and 11,907 carcass records obtained from fattened cattle from 2008 to 2012 were used. Genetic parameters were estimated based on eye muscle area (EMA), backfat thickness (BF) and marbling score (MS) measured by ultrasound-scanning of live cows and using the official technique on chilled bovine half-carcasses after slaughtering. Heritability and genetic correlation for carcass traits were estimated using a mixed model equation that consisted of environmental effects as fixed parameters and additive genetic effects and residual effects as random parameters, assuming that traits were different between ultrasound and carcass measurements. This statistical method was applied to the average information restricted maximum likelihood method. The heritability of EMA, BF and MS measured by ultrasound were 0.33, 0.61 and 0.46, respectively, while the heritability estimates of the corresponding traits based on carcass measurements were 0.29, 0.40 and 0.38, respectively and the genetic correlation between ultrasound and carcass traits for EMA, BF and MS were 0.41, 0.78 and 0.67, respectively. The genetic correlation between ultrasound and carcass traits was highly positive. Additionally, the selection response for marbling score was estimated to be 0.42 per generation if the cows were selected based on the ultrasound scan marbling score with an assumed selection intensity of 0.8. Overall, these results indicate that the ultrasound scan technique would be applicable to judging cow selection for genetically improved meat quality.

Global Genetic Analysis

  • Elahi, Elahe;Kumm, Jochen;Ronaghi, Mostafa
    • BMB Reports
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    • v.37 no.1
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    • pp.11-27
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    • 2004
  • The introduction of molecular markers in genetic analysis has revolutionized medicine. These molecular markers are genetic variations associated with a predisposition to common diseases and individual variations in drug responses. Identification and genotyping a vast number of genetic polymorphisms in large populations are increasingly important for disease gene identification, pharmacogenetics and population-based studies. Among variations being analyzed, single nucleotide polymorphisms seem to be most useful in large-scale genetic analysis. This review discusses approaches for genetic analysis, use of different markers, and emerging technologies for large-scale genetic analysis where millions of genotyping need to be performed.

Differential Humoral Immune Responses in Pb-exposed Mice with Different Circling Preference

  • Kim, Dongsoo
    • Proceedings of the Korean Society of Toxicology Conference
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    • 2003.10b
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    • pp.161-161
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    • 2003
  • Different circling preference of mice is a reference of inter-individual differences in their endogenous neuroimmune circuits. I have investigated relationship between differential immune responses in mice, who have same age, gender, and genetic background, and circling behavior preference.(omitted)

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Defense Genes Induced by Pathogens and Abiotic Stresses in Panax ginseng C.A. Meyer

  • Lee, Ok-Ran;Sathiyaraj, Gayathri;Kim, Yu-Jin;In, Jun-Gyo;Kwon, Woo-Seang;Kim, Ju-Han;Yang, Deok-Chun
    • Journal of Ginseng Research
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    • v.35 no.1
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    • pp.1-11
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    • 2011
  • Korean ginseng is a medicinally important perennial herb from the family Araliaceae. It has been cultivated for its highly valued medicinal properties for over 1,000 years in east Asian countries such as China, Korea, and Japan. Due to its longtime cultivation in shady areas, ginseng is frequently exposed to pathogenic infections. Plants protect themselves from microbial pathogens using an array of defense mechanisms, some of which are constitutively active, while others are activated upon pathogen invasion. These induced defense responses, controlled by defense-related genes, require tradeoffs in terms of plant fitness. We hypothesize that ginseng, as with other plants, possesses regulatory mechanisms that coordinate the activation of attacker-specific defenses in order to minimize fitness costs while attaining optimal resistance. Several classes of defense-related genes are induced by infection, wounds, irradiation, and other abiotic stresses. Both salicylates and jasmonates have been shown to cause such responses, although their specific roles and interactions in signaling and development are not fully understood in ginseng. This review summarizes possible defense-related genes in ginseng based on their expression patterns against biotic and abiotic stresses and describes their functional roles.

Effects of selection index coefficients that ignore reliability on economic weights and selection responses during practical selection

  • Togashi, Kenji;Adachi, Kazunori;Yasumori, Takanori;Kurogi, Kazuhito;Nozaki, Takayoshi;Onogi, Akio;Atagi, Yamato;Takahashi, Tsutomu
    • Asian-Australasian Journal of Animal Sciences
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    • v.31 no.1
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    • pp.19-25
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    • 2018
  • Objective: In practical breeding, selection is often performed by ignoring the accuracy of evaluations and applying economic weights directly to the selection index coefficients of genetically standardized traits. The denominator of the standardized component trait of estimated genetic evaluations in practical selection varies with its reliability. Whereas theoretical methods for calculating the selection index coefficients of genetically standardized traits account for this variation, practical selection ignores reliability and assumes that it is equal to unity for each trait. The purpose of this study was to clarify the effects of ignoring the accuracy of the standardized component trait in selection criteria on selection responses and economic weights in retrospect. Methods: Theoretical methods were presented accounting for reliability of estimated genetic evaluations for the selection index composed of genetically standardized traits. Results: Selection responses and economic weights in retrospect resulting from practical selection were greater than those resulting from theoretical selection accounting for reliability when the accuracy of the estimated breeding value (EBV) or genomically enhanced breeding value (GEBV) was lower than those of the other traits in the index, but the opposite occurred when the accuracy of the EBV or GEBV was greater than those of the other traits. This trend was more conspicuous for traits with low economic weights than for those with high weights. Conclusion: Failure of the practical index to account for reliability yielded economic weights in retrospect that differed from those obtained with the theoretical index. Our results indicated that practical indices that ignore reliability delay genetic improvement. Therefore, selection practices need to account for reliability, especially when the reliabilities of the traits included in the index vary widely.

Enhancement of DNA Vaccine-induced Immune Responses by Influenza Virus NP Gene

  • Choi, So-Young;Suh, You-Suk;Cho, Jae-Ho;Jin, Hyun-Tak;Chang, Jun;Sung, Young-Chul
    • IMMUNE NETWORK
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    • v.9 no.5
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    • pp.169-178
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    • 2009
  • DNA immunization induces B and T cell responses to various pathogens and tumors. However, these responses are known to be relatively weak and often transient. Thus, novel strategies are necessary for enhancing immune responses induced by DNA immunization. Here, we demonstrated that co-immunization of influenza virus nucleoprotein (NP) gene significantly enhances humoral and cell-mediated responses to codelivered antigens in mice. We also found that NP DNA coimmunization augments in vivo proliferation of adoptively transferred antigen-specific CD4 and CD8 T cells, which enhanced protective immunity against tumor challenge. Our results suggest that NP DNA can serve as a novel genetic adjuvant in cocktail DNA vaccination.

Study on the space frame structures incorporated with magnetorheological dampers

  • Xu, Fei-Hong;Xu, Zhao-Dong;Zhang, Xiang-Cheng
    • Smart Structures and Systems
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    • v.19 no.3
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    • pp.279-288
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    • 2017
  • Magnetorheological damper has received significant attention in recent years due to the reason that it can offer adaptability of active control devices without requiring the associated large power sources. In this paper, performance tests on a MR damper are carried out under different currents, excitation amplitudes and frequencies, the damping characteristics and energy dissipation capacity of the MR damper are analyzed. Elasto-plastic dynamic analysis on a space frame structure incorporated with MR dampers is conducted, and numerical analysis results show that MR dampers can significantly mitigate the structural vibration responses. Finally, the genetic algorithm with the improved binary crossover and mutation technique is adopted to optimize the arrangement of MR dampers. Numerical results show that dynamic responses of the optimal controlled structure are mitigated more effectively.