• Title/Summary/Keyword: GCV

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A WEIGHTED GLOBAL GENERALIZED CROSS VALIDATION FOR GL-CGLS REGULARIZATION

  • Chung, Seiyoung;Kwon, SunJoo;Oh, SeYoung
    • Journal of the Chungcheong Mathematical Society
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    • v.29 no.1
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    • pp.59-71
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    • 2016
  • To obtain more accurate approximation of the true images in the deblurring problems, the weighted global generalized cross validation(GCV) function to the inverse problem with multiple right-hand sides is suggested as an efficient way to determine the regularization parameter. We analyze the experimental results for many test problems and was able to obtain the globally useful range of the weight when the preconditioned global conjugate gradient linear least squares(Gl-CGLS) method with the weighted global GCV function is applied.

A Study of the Bystander Effect and Its Enhancement in HSV-TK Gene Therapy Using a Murine Neuroblastoma Model (마우스 신경모세포종 모델을 이용한 HSV-TK 유전자 치료에서 Bystander 효과 및 증폭에 관한 연구)

  • Cho, Hyun Sang;Kim, Moon Kyu;Park, Chong Young
    • Clinical and Experimental Pediatrics
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    • v.45 no.3
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    • pp.354-361
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    • 2002
  • Purpose : Selective introduction of genes conferring chemosensitivity into proliferating tumor cells may be used to treat cancer. We first investigated the bystander effect of retrovirus-mediated gene transfer of herpes simplex virus thymidine kinase(HSV-TK) gene to murine neuroblstoma cell line(neuro-2a) in vitro and in vivo. Second, we examined the mechanism and its enhancement of the bystander effect in murine neuroblastoma. Methods : To investigate the bystander effect, we studied tumor growth and survival time after HSV-TK/ganciclovir(GCV) treatment in a syngenic A/J mouse neuroblastoma model by mixing various ratios of HSV-TK-expressing neuro-2a cells with wild type neuro-2a cells followed by GCV treatment. To investigate the mechanism of the bystander effect in murine neuroblastoma, immunohistochemistry using connexin 43, CD4 and CD8-specific monoclonal antibodies was analyzed. We studied whether IL-2-secreting neuro-2a cells(neuro-2a/IL-2) would potentiate the bystander effect. Results : A strong bystander effect was observed in vitro and in vivo. The bystander effect in murine neuroblastoma was dependent on the immune response rather than connexin-mediated gap junction. Neuro-2a/IL-2 treatment enhanced the bystander effect in the HSV-TK/GCV system in murine neuroblastoma model. Conclusion : We conclude that the bystander effect in murine neuroblastoma depends on immune response and is enhanced by neuro-2a/IL-2.

Adenovirus-mediated Double Suicide Gene Selectively Kills Gastric Cancer Cells

  • Luo, Xian-Run;Li, Jian-Sheng;Niu, Ying;Miao, Li
    • Asian Pacific Journal of Cancer Prevention
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    • v.13 no.3
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    • pp.781-784
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    • 2012
  • The aim of this study was to evaluate the effect of the adenovirus-mediated double suicide gene (CD/TK) for selective killing of gastric cancer cells. Gastric cancer cells SCG7901 and normal gastric epithelial cell lines were infected by adenoviruses Ad-survivin/GFP and Ad-survivin/CD/TK. GFP expression and CD-TK were detected by fluorescence microscopy and reverse transcriptase polymerase chain reaction (RT-PCR), respectively. After treatment of the infected cells with the pro-drugs ganciclovir (GCV) and/or 5-FC, the cell growth status was evaluated by methyl thiazolyl tetrazolium assay. Cell cycle changes were detected using flow cytometry. In nude mice bearing human gastric cancer, the recombinant adenovirus vector was injected directly into the tumor followed by an intraperitoneal injection of GCV and/or 5-FC. The subsequent tumor growth was then observed. The GFP gene driven by survivin could be expressed within the gastric cancer line SCG7901, but not in normal gastric epithelial cells. RT-PCR demonstrated the presence of the CD/TK gene product in the infected SCG7901 cells, but not in the infected normal gastric epithelial cells. The infected gastric cancer SCG7901, but not the gastric cells, was highly sensitive to the pro-drugs. The CD/TK fusion gene system showed significantly greater efficiency than either of the single suicide genes in killing the target cells (P<0.01). Treatment of the infected cells with the pro-drugs resulted in increased cell percentage in G0-Gl phase and decreased percentage in S phase. In nude mice bearing SCG7901 cells, treatment with the double suicide gene system significantly inhibited tumor growth, showing much stronger effects than either of the single suicide genes (P<0.01). The adenovirus-mediated CD/TK double suicide gene driven by survivin promoter combined with GCV an 5-FC treatment could be an effective therapy against experimental gastric cancer with much greater efficacy than the single suicide gene CD/TK combined with GCV or 5-FC.

Improving the Safety of Mesenchymal Stem Cell-Based Ex Vivo Therapy Using Herpes Simplex Virus Thymidine Kinase

  • Bashyal, Narayan;Lee, Tae-Young;Chang, Da-Young;Jung, Jin-Hwa;Kim, Min Gyeong;Acharya, Rakshya;Kim, Sung-Soo;Oh, Il-Hoan;Suh-Kim, Haeyoung
    • Molecules and Cells
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    • v.45 no.7
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    • pp.479-494
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    • 2022
  • Human mesenchymal stem cells (MSCs) are multipotent stem cells that have been intensively studied as therapeutic tools for a variety of disorders. To enhance the efficacy of MSCs, therapeutic genes are introduced using retroviral and lentiviral vectors. However, serious adverse events (SAEs) such as tumorigenesis can be induced by insertional mutagenesis. We generated lentiviral vectors encoding the wild-type herpes simplex virus thymidine kinase (HSV-TK) gene and a gene containing a point mutation that results in an alanine to histidine substitution at residue 168 (TK(A168H)) and transduced expression in MSCs (MSC-TK and MSC-TK(A168H)). Transduction of lentiviral vectors encoding the TK(A168H) mutant did not alter the proliferation capacity, mesodermal differentiation potential, or surface antigenicity of MSCs. The MSC-TK(A168H) cells were genetically stable, as shown by karyotyping. MSC-TK(A168H) responded to ganciclovir (GCV) with an half maximal inhibitory concentration (IC50) value 10-fold less than that of MSC-TK. Because MSC-TK(A168H) cells were found to be non-tumorigenic, a U87-TK(A168H) subcutaneous tumor was used as a SAE-like condition and we evaluated the effect of valganciclovir (vGCV), an oral prodrug for GCV. U87-TK(A168H) tumors were more efficiently ablated by 200 mg/kg vGCV than U87-TK tumors. These results indicate that MSC-TK(A168H) cells appear to be pre-clinically safe for therapeutic use. We propose that genetic modification with HSV-TK(A168H) makes allogeneic MSC-based ex vivo therapy safer by eliminating transplanted cells during SAEs such as uncontrolled cell proliferation.

An Analysis of Genetic Variation and Divergence on Silk Fibre Characteristics of Multivoltine Silkworm (Bombyx mori L.) Genotypes

  • Kumaresan P.;Koundinya P. R.;Hiremath S. A.;Sinha R. K.
    • International Journal of Industrial Entomology and Biomaterials
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    • v.14 no.1
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    • pp.23-32
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    • 2007
  • The nature of genetic variation and diversity among the 65 multivoltine silkworm genotypes was evaluated for 16 post cocoon characters. The components of genetic variation revealed higher PCV (60.487%) and GCV (44.56%) for evenness (variation 1) followed by cohesion (PCV=55.38%, GCV=40.36%) and non-broken filament length (PCV=32.05%, GCV=31.28%). The higher heritability ($h^2$ in broad sense) was observed for boil-off loss (95.6%) followed by non-broken filament length (95.22%). The both genotypic and phenotypic correlation indicated significant positive correlation of filament length with non-broken filament length, silk recovery, raw silk, neatness, and low neatness; and negative correlation with denier, renditta and silk waste. The principal component analysis (PCA) revealed 75.381 % of total variance from the five principal components extracted. On the basis of Mahalonobis' $D^2$ values (Ward's minimum variance), the sixty-five multivoltine silkworm genotypes were classified in to 9 clusters with substantial inter and intra cluster distances. Number of genotypes included in different clusters varied from 3 to 17. The results indicated that the optimum distance obtained in cluster VII (15.059) along with higher cluster mean values especially for filament length, non broken filament length, renditta, silk recovery, silk waste, and raw silk emphasized the utilization of these genotypes in the conventional silkworm breeding programme for improvement of multivoltine silk fibre quality. The possibility of exploiting genetic variation in post cocoon traits for efficient breeding programme is discussed.

Effect of retinoic acid on the bystander effect in gene therapy using the Herpes Simplex Virus thymidine kinase (Herpes Simplex Virus thymidine kinase gene을 이용한 유전자 치료에서 retinoic acid가 bystander effect에 미치는 영향)

  • Park, Jae Yong;Kim, Chang Ho;Jung, Tae Hoon;Albelda, Steven M.
    • Tuberculosis and Respiratory Diseases
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    • v.44 no.1
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    • pp.162-174
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    • 1997
  • Background : Metabolic cooperation via gap junctional intercellular communication (GJIC) is an important mechanism of the bystander effect in gene therapy using the Herpes Simplex Virus thymidine kinase/ganciclovir (HSVtk) "prodrug" system. Since retinoids have been reported to increase GJIC by induction of connexin 43 expression, we hyporthesized that treatment of tumor cells with retinoic acid could augment the bystander effect of the HSVtk/GCV system and result in improved tumor cell killing by enhancing GJIC. Methods : We transferred HSVtk gene to SKHep-J cell line that does not express connexin43, and also transferred the gene to human and murine mesothelioma cell lines that express connexin43. We verified that retinoic acid enhanced GJIC utilizing a functional double-dye transfer study and evaluated the effects of retinoic acid on the growth rate of tumor cells. We then tested the effects of retinoic acid on bystander-mediated cell killing. Results : Addition of all-trans retinoic acid (RA) increased GJIC in cell lines expressing connexin 43 and was asspciated with more efficient in vitro bystander killing in cells transduced with HSVtk via adenoviral and retroviral vectors. In contrast, there was no increase in the efficiency of the bystander effect after exposure to RA in a cell line which had no delectable connexin 43. Conclusion : These results provide evidence that retinoids can augment the efficiency of cell killing with the HSVtk/GCV system by enhancing bystander effect and may thus be a promising new approach to improve responses in gene therapy utilizing the HSVtk system to treat tumors.

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Genetic Variability and Association of Yield Attributing Characters with Grain Yield in Deepwater Rice

  • Bose L. K.;Pradhan S. K.;Mohanty A.;Nagaraju M.
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.50 no.4
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    • pp.262-264
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    • 2005
  • A study on genetic variability and association of yield attributing characters with grain yield was carried out using 35 deepwater rice genotypes. High genotypic co-efficient of variation (GCV) was observed for plot yield, $EBT/m^2$, plant height and days to $50\%$ flowering (DFF). For all the traits, estimates of the phenotypic co-efficient of variation (PCV) were higher than GCV, indicating presence of environmental influence. High heritability and genetic advance was observed for plot yield, $EBT/m^2$ and plant height. Plot yield had significant positive association with test weight, $EBT/m^2$ and DFF. However, test weight had the maximum direct effect on grain yield

Learning performance of by the momentum and the bias learning method (모멘트와 바이어스 학습법에 의한 학습 성능)

  • Kim, Eun-Mi;Lee, Bae-Ho
    • Proceedings of the Korea Information Processing Society Conference
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    • 2005.05a
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    • pp.431-434
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    • 2005
  • 근원데이터나, 이원데이터를 이용한 문제를 해결하기 위해서는 많은 경우에 완전 해를 갖는 문제로 변형시키기 위해 정규화할 필요성이 있다. 본 논문에서는 이러한 정규화 인수를 찾는 문제를 기존의 GCV, L-Curve, 그리고 이원데이터를 RBF 신경회로망에 적용시킨 커널 학습법에 대한 각각의 성능을 비교실험을 통해 고찰한다. 이때 커널을 이용한 학습법의 성능을 향상하기 위해, 전체학습과 성능의 제한적 비례관계라는 설정아래, 각각의 학습에 따라 능동적으로 변화하는 동적모멘텀의 도입을 제안한다. 끝으로 제안된 동적모멘텀이 분류문제의 표준인 Iris 데이터, Singular 시스템의 대표적 모델인 가우시안 데이터, 그리고 마지막으로 1차원 이미지 복구문제인 Shaw데이터를 이용한 각각의 실험에서 분류문제와 회계문제 양쪽 모두에 있어 기존의 GCV, L-Curve와 동등하거나 우수한 성능이 있음을 보인다.

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Image Signal Denoising by the Soft-Threshold Technique Using Coefficient Normalization in Multiwavelet Transform Domain (멀티웨이블릿 변환영역에서 계수정규화를 이용한 Soft-Threshold 기법의 영상신호 잡음제거)

  • Kim, Jae-Hwan;Woo, Chang-Yong;Park, Nam-Chun
    • Journal of the Institute of Convergence Signal Processing
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    • v.8 no.4
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    • pp.255-265
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    • 2007
  • In case of wavelet coefficients have correlation, in image signal denoising using wavelet shrinkage denoising method, the denoising effect for the image signal is reduced when the wavelet shrinkage denoising method is used. The coefficients of multiwavelet transform have correlation by pre-filters. To solve the degradation problem in multiwavelet transform, V Sterela suggested a new pre-filter for the Universal threshold or weighting factors to the threshold. In this paper, to improve the denoising effect in the multiwavelet transform, the coefficient normalizing method that the coefficient are divided by estimated noise deviation is adopted to the transformed multiwavelet coefficients in the course of wavelet shrinkage technique. And the thresholds of universal, SURE and GCV are estimated using normalized coefficients and tried to denoise by the wavelet shrinkage technique. We compared PSNRs of denoised images for each thresholds and confirmed the efficiency of the proposed method.

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The Vulnerability Assessment of Hydro-pneumatic Suspension of Ground Combat Vehicles Using Vulnerable Area Method and DMEA (취약면적법과 DMEA를 활용한 지상전투차량 유공압 현가장치의 취약성 평가)

  • Nam, Myung Hoon;Park, Kang;Park, Woo Sung;Yoo, Chul
    • Korean Journal of Computational Design and Engineering
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    • v.22 no.2
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    • pp.141-149
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    • 2017
  • Vulnerability assesses the loss of major performance functions of GCV (Ground Combat Vehicles) when it is hit by enemy's shell. To decide the loss of major functions, it is determined what effects are on the performance of GCV when some components of GCV are failed. M&S (Modeling and Simulation) technology is used to vulnerability assessment. The hydro-pneumatic suspension is used as a sample part. The procedures of vulnerability assessment of the hydro-pneumatic suspension are shown as follows: 1) The components of the suspension are defined, and shot lines are generated evenly around the part. 2) The penetrated components are checked by using the penetration equation. 3) The function model of the suspension is designed by using IDEF0. 4) When the failure of the critical components of the suspension happens, its effect on the function of the suspension can be estimated using DMEA (Damage Mode and Effects Analysis). 5) The diagram of FTA (Fault Tree Analysis) is designed by exploiting DMEA. 6) The damage probability of the suspension is calculated by using FTA and vulnerable area method. In this paper, SLAP (Shot Line Analysis Program) which was developed based on COVART methodology. SLAP calculates the damage probability and visualizes the vulnerable areas of the suspension.