• Title/Summary/Keyword: Fungal isolation

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Studies on Screening and Isolation of .$\alpha$-Amylase Inhibitors of Soil Microorganisms (I)

  • Kwak, Jin-Hwan;Choi, Eung-Chil;Kim, Byong-Kak
    • Archives of Pharmacal Research
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    • v.8 no.2
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    • pp.67-75
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    • 1985
  • To find emylase inhibitors produced by microorganisms from soil, a strain which had a strong inhibitory activity against bacteria .alpha.-amylase was isolated from the soil smaple collected in Seoul. The morphological and physiological characteristics of this strain on several media and its utilization of carbon sources showed that it was one of Streptomyces specties according to the international Streptomyces Project method. The amylase inhibitor of this strain was purified by means of acetone precipitation, adsorption on Amberlite XAD-2, and column chromatography on Amberlite CG-50 and SP-Sephadex C-25. The inhibitor was stable at the pH range of 1-10 and at 100.deg.C for half an hour, and had inhibitory activities against other amylases such as salivary .alpha.-amylase, pancreatic .alpha.-amylase, fungal .alpha.-amylase and glucoamylase. The kinetic studies of the inhibitor showed that its inhibitory effect on starch hydrolysis by .alpha.-amylase was non-competitive.

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Isolation and Characterization of Three Unrecorded Zygomycete Fungi in Korea: Cunninghamella bertholletiae, Cunninghamella echinulata, and Cunninghamella elegans

  • Nguyen, Thuong T.T.;Choi, Young-Joon;Lee, Hyang Burm
    • Mycobiology
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    • v.45 no.4
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    • pp.318-326
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    • 2017
  • In a survey of undiscovered taxa in Korea, three zygomycete fungal strains-EML-W31, EML-HGD1-1, and EML-RUS1-1-were isolated from freshwater, grasshopper fecal, and soil samples in Korea. On the basis of the morphological characteristics and phylogenetic analysis of internal transcribed spacer and 28S rDNA, the isolates of EML-W31, EML-HGD1-1, and EML-RUS1-1 were confirmed to be Cunninghamella bertholletiae, Cunninghamella echinulata, and Cunninghamella elegans, respectively. These species have not been previously described in Korea.

Identification and Characterization of Pseudocercospora cornicola Causing Leaf Spots on Cornus officinalis

  • In-Young Choi;Ho-Jong Ju;Lamiya Abasova;Joon-Ho Choi;Hyeon-Dong Shin
    • The Korean Journal of Mycology
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    • v.50 no.2
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    • pp.131-136
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    • 2022
  • Cornus officinalis plants that grow in several locations in Korea have been found to be infected with leaf spot disease. Symptoms include necrotic lesions, which are angular, irregularly shaped, vein-limited, and dark brown, on both sides of the leaves. The causal agent of the disease was identified to be Pseudocercospora cornicola based on the morphological characteristics of the fungus and molecular phylogenetic analysis of the obtained multi-locus DNA sequence data. This is the first report investigating P. cornicola found on C. officinalis in Korea.

Taxonomy of fungal complex causing red-skin root of Panax ginseng in China

  • Lu, Xiao H.;Zhang, Xi M.;Jiao, Xiao L.;Hao, Jianjun J.;Zhang, Xue S.;Luo, Yi;Gao, Wei W.
    • Journal of Ginseng Research
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    • v.44 no.3
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    • pp.506-518
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    • 2020
  • Background: Red-skin root of Asian ginseng (Panax ginseng) significantly reduces the quality and limits the production of ginseng in China. The disease has long been thought to be a noninfectious physiological disease, except one report that proved it was an infectious disease. However, the causal agents have not been successfully determined. In the present study, we were to reveal the pathogens that cause red-skin disease. Methods: Ginseng roots with red-skin root symptoms were collected from commercial fields in Northeast China. Fungi were isolated from the lesion and identified based on morphological characters along with multilocus sequence analyses on internal transcription spacer, β-tubulin (tub2), histone H3 (his3), and translation elongation factor 1α (tef-1α). Pathogens were confirmed by inoculating the isolates in ginseng roots. Results: A total of 230 isolates were obtained from 209 disease samples. These isolates were classified into 12 species, including Dactylonectria sp., D. hordeicola, Fusarium acuminatum, F. avenaceum, F. solani, F. torulosum, Ilyonectria mors-panacis, I. robusta, Rhexocercosporidium panacis, and three novel species I. changbaiensis, I. communis, and I. qitaiheensis. Among them, I. communis, I. robusta, and F. solani had the highest isolation frequencies, being 36.1%, 20.9%, and 23.9%, respectively. All these species isolated were pathogenic to ginseng roots and caused red-skin root disease under appropriate condition. Conclusion: Fungal complex is the causal agent of red-skin root in P. ginseng.

Distribution of Seed-borne fungi on Rice Seeds Affecting Rice Grain Qualify

  • Shim, Hong-Sik;Hong, Sung-Jun;Park, Hyo-Won;Kim, Yong-Ki;Yeh, Wan-Hae
    • Proceedings of the Korean Society of Plant Pathology Conference
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    • 2003.10a
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    • pp.119.2-120
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    • 2003
  • Seed-borne fungal pathogens on rice seeds were investigated in order to evaluate their effect on rice grain quality. Rice seeds of two cultivars, Ilmibyeo and Daesanbyeo were collected from 27 areas of Korea and the fungal parasites on seeds were isolated by using a blotter method. Isolation frequency and number of species were varied from collection areas of seed samples. A total 13 species of fungi were identified from the seeds. Among them, Altemana alternata was the most frequent over the country. Bipoiaris oryzae most commonly from Gyeongbuk and Jeonbuk, Alternaria padwickii from Jeonbuk, and Nigrospora oryzae from Choongnam. However Bipolaris. oryzae, Alternaria padwickii, and Nigrospora oryzae were the most frequently isolated fungi from Gyeongbuk and Jeonbuk, and Chungnam, respectively. B. oryzae, A. alternata, A. padwickii, and N. oryzae were dominants on Ilmibyeo showing 10.3%, 10.2%, 5.2%, and 5.2% infection rate, respectively. While, N. oryzae, A alternata, and Cladosporium sp. were most frequently isolated fungi from Deasanbyeo revealing 15.1%, 9.6%, and 7.5% infection rate, respectively. These fungi inhabiting on hulls or endosperms of rice seed might be considered as potential factors decreasing rice grain quality. Further investigation of the fungi on grain rice quality are undergoing.

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In vitro Inhibition of Fungal Root-Rot Pathogens of Panax notoginseng by Rhizobacteria

  • Guo, Rongjun;Liu, Xingzhong;Li, Shidong;Miao, Zuoqing
    • The Plant Pathology Journal
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    • v.25 no.1
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    • pp.70-76
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    • 2009
  • The rhizobacteria of Panax notoginseng were isolated from six sites in Yanshan, Maguan and Wenshan Counties, Yunnan Province of China, and their antagonistic activity against P. notoginseng root-rot fungal pathogens was determined. Of the 574 rhizobacteria isolated, 5.8% isolates were antagonistic in vitro to at least one of the five pathogens, Cylindrocarpon didynum, Fusarium solani, Phytophthora cactorum, Phoma herbarum, and Rhizoctonia solani. The number of rhizo bacteria and the number that inhibited fungi differed depending on sampling sites and isolation methods. Rhizobacteria isolated from the site in Yanshan and Maguan showed more antagonistic effect than them in Wenshan. Heat treatment of rhizosphere soil at $80^{\circ}C$ for 20 min scaled the antagonists up to 14.0%. Antagonistic bacteria in the roots proportioned 3.9% of the total isolates. The most antagonistic isolates 79-9 and 81-4 are Bacillus subtilis based on their 168 rDNA sequence and biochemical and physiological characteristics. Identification and evaluation of antagonistic bacteria against P. notoginseng root-rot pathogens in the main planting areas improved our understanding of their distribution in rhizosphere soil. Furthermore these results indicated that the interactions between biocontrol agent and soil microbes should be seriously considered for the successful survival and biocontrol efficacy of the agents in soil.

Cladosporium sp. is the Major Causal Agent in the Microbial Complex Associated with the Skin Sooty Dapple Disease of the Asian Pear in Korea

  • Park, Young-Seob;Kim, Ki-Chung;Lee, Jang-Hoon;Cho, Song-Mi;Choi, Yong-Soo;Kim, Young-Cheol
    • The Plant Pathology Journal
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    • v.24 no.2
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    • pp.118-124
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    • 2008
  • Skin sooty dapple disease, a fungal disease that lowers Asian pear fruit quality, has emerged recently in Korea but has not yet been thoroughly characterized. This disease affects the surface of fruit, leaves, and young shoots of the Asian pear, typically appearing as a dark or pale black dapple on the fruit surface. The disease initiates on the fruit with small circular lesions that become bigger, eventually spreading to form large circular or indefinite lesions. Sparse dark or flourishing white-greyish aerial mycelia and appearance of a dark or pale black dapple on the fruit surface are typical signs of this disease. The disease was severe during cold storage of the Niitaka and Chuhwangbae varieties, but more limited on the Gamcheonbae and Hwangkeumbae varieties. To identify causal pathogens, 123 fungal isolates were obtained from lesions. The fungi that caused typical skin sooty dapple disease symptoms in our bioassay were identified. Based on their morphological characteristics, 74% of the isolates were Cladosporium sp. and 5-7 % of the isolates were Leptosphaerulina sp., Tripospermum sp., or Tilletiopsis sp. None of the isolates caused severe soft rot by injection to a wound plug, but some of the Cladosporium sp. isolates caused mild maceration. Therefore this microbiol complex cannot account for the soft rot also observed in stored fruits. The high frequency of isolation of Cladosporium sp. from disease tissues and bioassay on pear fruit surface suggest that Cladosporium sp. could be a major pathogen in the microbial complex associated with skin sooty dapple disease of the Asian pear in Korea.

Isolation and Selection of Functional Microbes for Eco-friendly Turfgrass Management in Golf Course from Livestock Manure Compost (친환경 잔디관리를 위한 가축분퇴비 중 기능성미생물의 분리 및 선발)

  • Jeong, Je-Yong;Kim, Young-Sun;Cho, Sung-Hyun;Lee, Geung-Joo
    • Weed & Turfgrass Science
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    • v.6 no.2
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    • pp.157-164
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    • 2017
  • Functional microorganisms decompose various organic matter by enzyme activity and suppress plant disease caused by pathogen. This study was conducted to isolate and select functional microorganisms with protein or carbohydrate degradation activities and antagonistic activity against turfgrass fungal pathogens for eco-friendly turfgrass management in golf course from compost containing livestock manure of poultry or swine. Totally 68 isolates collected from livestock manure compost strains were isolated and tested for their activities of amylase, protease and lipase and antagonistic activities against Rhizoctonia solani AG2-2, R. solani AG1-1, and Sclerotinia homoeocarpa. Among the isolates, 34 strains were selected as functional microbes showing higher activities of amylase and protease. Three isolates of ASC-14, ASC-18, and ASC-35 among the 34 strains were selected as antifungal bacterial strains repressing the above 3 turfgrass fungal pathogens. Analysis results of 16s rRNA gene sequence and phylogenic cluster indicated that ASC-14 and ASC-18 belonged to Bacillus amyloliquefaciens, while ASC-35 was B. subtilis, respectively.

Measurement of Ochratoxin A and Isolation of the fungi producing Ochratoxin A from Korean traditional fermented soybean foodstuffs (전통 대두발효식품(醱酵食品)중에 존재하는 Ochratoxin A 생산균(菌) 분리(分離)와 Ochratoxin A량 측정)

  • Kang, Sung-Chul;Lee, Sang-Sun;Shin, Hyun-Kil;Kim, Joung-Bae
    • The Korean Journal of Mycology
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    • v.19 no.2
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    • pp.148-155
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    • 1991
  • Fungal ochratoxin A wes extracted and measured from the Korean traditional and fermented soybean foodstuffs (12 samples of Maeju, 28 samples of Dwangjang and 28 samples of Kangjang) collected from the whole nation wide regions. The various fungi were isolated from the foodstuffs and they were also examined whether the isolates produce ochratoxin A (OA) under the artificial conditions or not. Determinations of OA produced by the fungi were done with the antibody-attached CIA method, which was accurate or sensitive at the range of 20 pg per sample with a ninty percent recovery. Out of the 222 fungal isolates, 39 isolates produced the OA under the artificial conditions, and were identified as species of Aspergillus, Penicillium, Paecilom­yces or other genera. The OA detected in all soybean foodstuffs was presumed to be originated from the first fermentation step of maeju.

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