• 제목/요약/키워드: Fungal biodiversity

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Ceratocystis quercicola sp. nov. from Quercus variabilis in Korea

  • Cho, Sung-Eun;Lee, Dong-Hyeon;Wingfield, Michael J.;Marincowitz, Seonju
    • Mycobiology
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    • 제48권4호
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    • pp.245-251
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    • 2020
  • During a survey of putative fungal pathogens infecting oak trees in the Gangwon Province of the Republic of Korea, a fungus resembling a Ceratocystis sp. was repeatedly isolated from natural wounds on Quercus variabilis. Morphological comparisons and DNA sequence comparisons based on partial β-tubulin and TEF-1α gene regions showed that the fungus resided in a distinct lineage. This novel Ceratocystis species is described here as C. quercicola sp. nov. This is the first novel species of Ceratocystis to be reported from Korea. A pathogenicity test showed that it can cause lesions on inoculated trees but that it had a very low level of aggressiveness. The discovery of this fungus suggests that additional taxa residing in Ceratocystis are likely to be discovered in Korea in the future.

Erysiphe quercicola Causing Powdery Mildew on Quercus rubra in Korea

  • Young-Joon Choi;Jun Hyuk Park;In-Young Choi;Lamiya Abasova;Joon-Ho Choi;HyeonDong Shin
    • 한국균학회지
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    • 제50권2호
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    • pp.137-141
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    • 2022
  • In Korea, powdery mildew has been observed on Quercus rubra, commonly called the northern red oak tree. Based on its morphological and molecular phylogenetic analyses, the fungal agent was identified as Erysiphe quercicola, but it was distinct from the other four Erysiphe species, specialized to Quercus species. This is the first confirmed report on the identity of powdery mildew found on Q. rubra in Korea. This finding can help understand the host expansion of E. quercicola and the biodiversity of powdery mildew on Quercus species.

독도 번행초에서 분리된 내생균류의 배양적 특성과 Aspergillus tubingensis YH103의 gibberellin A7의 생산 (Gibberellin A7 production by Aspergillus tubingensis YH103 and cultural characteristics of endophytic fungi isolated from Tetragonia tetragonoides in Dokdo islands)

  • 유영현;박종명;임성환;강상모;박종한;이인중;김종국
    • 미생물학회지
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    • 제52권1호
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    • pp.32-39
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    • 2016
  • 독도에 자생하는 번행초의 뿌리로부터 순수 분리하여 형태적으로 상이한 17개의 내생균류를 선별하였다. 또한 분리된 균류들에 대하여 각각의 염농도와 pH 농도 구배에 따라 생장 시험을 확인하였다. 내생균류에 대해 각각 난장이벼의 유묘에 식물생장활성시험을 진행하였고, 그 결과 YH103 균주가 가장 높은 활성을 나타내었다. 계통분석은 Maximum likelihood 방법을 활용하여 결합된 ITS영역, beta-tubulin 및 calmodulin 유전자 염기서열을 분석하여 분리된 균주의 유연관계를 분석하였다. YH103 균주의 배양여과액을 HPLC와 GC/MS SIM을 이용하여 분석한 결과 식물호르몬인 지베렐린 $GA_4$, $GA_7$, $GA_8$$GA_{19}$가 확인되었다. 최종적으로 YH103 균주의 형태학적 관찰 및 결합된 유전자 염기서열의 분자적 분석을 통해 GA를 생산하는 새로운 Aspergillus tubingensis로 동정되었다.

Cutaneous Microflora from Geographically Isolated Groups of Bradysia agrestis, an Insect Vector of Diverse Plant Pathogens

  • Park, Jong Myong;You, Young-Hyun;Park, Jong-Han;Kim, Hyeong-Hwan;Ghim, Sa-Youl;Back, Chang-Gi
    • Mycobiology
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    • 제45권3호
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    • pp.160-171
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    • 2017
  • Larvae of Bradysia agrestis, an insect vector that transports plant pathogens, were sampled from geographically isolated regions in Korea to identify their cutaneous fungal and bacterial flora. Sampled areas were chosen within the distribution range of B. agrestis; each site was more than 91 km apart to ensure geographical segregation. We isolated 76 microbial (fungi and bacteria) strains (site 1, 29; site 2, 29; site 3, 18 strains) that were identified on the basis of morphological differences. Species identification was molecularly confirmed by determination of universal fungal internal transcribed spacer and bacterial 16S rRNA gene sequences in comparison to sequences in the EzTaxon database and the NCBI GenBank database, and their phylogenetic relationships were determined. The fungal isolates belonged to 2 phyla, 5 classes, and 7 genera; bacterial species belonged to 23 genera and 32 species. Microbial diversity differed significantly among the geographical groups with respect to Margalef's richness (3.9, 3.6, and 4.5), Menhinick's index (2.65, 2.46, and 3.30), Simpson's index (0.06, 0.12, and 0.01), and Shannon's index (2.50, 2.17, and 2.58). Although the microbial genera distribution or diversity values clearly varied among geographical groups, common genera were identified in all groups, including the fungal genus Cladosporium, and the bacterial genera Bacillus and Rhodococcus. According to classic principles of co-evolutionary relationship, these genera might have a closer association with their host insect vector B. agrestis than other genera identified. Some cutaneous bacterial genera (e.g., Pseudomonas) displaying weak interdependency with insect vectors may be hazardous to agricultural environments via mechanical transmission via B. agrestis. This study provides comprehensive information regarding the cutaneous microflora of B. agrestis, which can help in the control of such pests for crop management.

Tuber borchii Shapes the Ectomycorrhizosphere Microbial Communities of Corylus avellana

  • Li, Xiaolin;Zhang, Xiaoping;Yang, Mei;Yan, Lijuan;Kang, Zongjing;Xiao, Yujun;Tang, Ping;Ye, Lei;Zhang, Bo;Zou, Jie;Liu, Chengyi
    • Mycobiology
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    • 제47권2호
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    • pp.180-190
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    • 2019
  • In this study, eight-month-old ectomycorrhizae of Tuber borchii with Corylus avellana were synthesized to explore the influence of T. borchii colonization on the soil properties and the microbial communities associated with C. avellana during the early symbiotic stage. The results showed that the bacterial richness and diversity in the ectomycorrhizae were significantly higher than those in the control roots, whereas the fungal diversity was not changed in response to T. borchii colonization. Tuber was the dominant taxon (82.97%) in ectomycorrhizae. Some pathogenic fungi, including Ilyonectria and Podospora, and other competitive mycorrhizal fungi, such as Hymenochaete, had significantly lower abundance in the T. borchii inoculation treatment. It was found that the ectomycorrhizae of C. avellana contained some more abundant bacterial genera (e.g., Rhizobium, Pedomicrobium, Ilumatobacter, Streptomyces, and Geobacillus) and fungal genera (e.g., Trechispora and Humicola) than the control roots. The properties of rhizosphere soils were also changed by T. borchii colonization, like available nitrogen, available phosphorus and exchangeable magnesium, which indicated a feedback effect of mycorrhizal synthesis on soil properties. Overall, this work highlighted the interactions between the symbionts and the microbes present in the host, which shed light on our understanding of the ecological functions of T. borchii and facilitate its commercial cultivation.

한국의 대표 곰팡이 100종과 한국명 (One Hundred Representative Fungi in Korea and Their Korean Names)

  • 최효원;임영운;김명동;김자영;김창무;김창선;도윤수;백창기;상현규;신우창;이승열;정다운;정희영;최영준;최인영;한재구;홍승범
    • 한국균학회지
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    • 제48권3호
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    • pp.355-367
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    • 2020
  • 국민들이 곰팡이에 친근하게 다가갈 수 있도록 한국을 대표할 수 있는 곰팡이 100종을 선발하고 이들에 대한 한국명을 제시하였다. 이 과제는 한국균학회의 균학용어심의위원회의 주관으로 수행되었다. 1) 위원회는 먼저 한국 대표곰팡이 100종 선정을 위한 기준을 제정하였고 이에 따라 후보 곰팡이를 선발하였다. 2) 한국명의 통일성과 안정성을 위하여 곰팡이 한국명 작명 원칙을 제정하고 이에 따라 한국명의 후보명을 제시하였다. 3) 후보명을 인터넷에 게시하여 한국균학회원의 의견을 수렴하였고 또한 식물병원균은 한국식물병리학회의, 버섯은 한국버섯학회의 의견을 수렴하여 최종적으로 곰팡이 한국명을 결정하였다. 한국명이 부여된 한국의 대표곰팡이 100종은 일반곰팡이(효모포함)가 41종, 식물병원균이 28종, 버섯이 31종이다.

A Checklist of Mushrooms of Phousabous National Protected Area (PNPA) of Lao PDR

  • Hong, Min Young;Park, Soo Wan;Kim, Dae Ho;Saysavanh, Veosavanh;Lee, Jong Kyu
    • Journal of Forest and Environmental Science
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    • 제35권4호
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    • pp.268-271
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    • 2019
  • Mushroom survey and collection were conducted in the Phousabous National Protected Area (PNPA), which is located at the Northeastern area 230km from the capital city of Lao-PDR, Vientiane, from April 2017 to September 2018. During this periods, mushroom specimens were collected from 8 different locations, and then they were identified and classified into 284 species, 142 genera, 56 families, 20 orders and 7 classes by morphological and molecular analyses. The mushrooms belongs to Ascomycota were classified into 10 species, 5 genera, 5 families, 4 orders and 3 classes, while those belongs to Basidiomycota were classified into 274 species, 137 genera, 51 families, 16 orders, and 4 classes, respectively. Among these mushrooms, the most species-rich families are Boletaceae (16.06%), Polyporaceae (10.12%), Russulaceae (9.94%), Amanitaceae (7.68%), Agaricaceae (4.54%), Marasmiaceae (4.36%), Cortinariaceae (3.66%), Entolomataceae (3.66%), Mycenaceae (2.79%), Xylariaceae (2.44%), Physalacriaceae (2.09%), Omphalotaceae (2.09%), Hydnangitaceae (2.09%), Lyophyllaceae (1.92%), Tricholomataceae (1.75%) and comprised 75.19% of the total specimens identified.

Seven New Recorded Species in Five Genera of the Strophariaceae in Korea

  • Cho, Hae Jin;Lee, Hyun;Park, Jae Young;Park, Myung Soo;Kim, Nam Kyu;Eimes, John A.;Kim, Changmu;Han, Sang-Kuk;Lim, Young Woon
    • Mycobiology
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    • 제44권3호
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    • pp.137-145
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    • 2016
  • Most known species in the Strophariaceae are decomposers and grow on various kind of organic matter. Approximately 18 genera and 1,316 species in the Strophariaceae have been reported worldwide. Through an ongoing survey of indigenous fungi in Korea, 29 specimens belonging to the Strophariaceae were collected from 2012 to 2016. These specimens were identified based on morphological characteristics and molecular analysis of internal transcribed spacer sequences. Fifteen taxa were confirmed, with eight species matching those previously recorded. Seven species in five genera were shown to be new records in Korea: Galerina marginata, Gymnopilus crociphyllus, Gymnopilus picreus, Hebeloma birrus, Hebeloma cavipes, Pholiota multicingulata, and Psilocybe thaizapoteca. In this study, we provide detailed morphological descriptions of these species and investigate their evolutionary relationships by constructing phylogenetic trees.

Characterization of Two New Records of Zygomycete Species Belonging to Undiscovered Taxa in Korea

  • Nguyen, Thi Thuong Thuong;Lee, Seo Hee;Bae, Sarah;Jeon, Sun Jeong;Mun, Hye Yeon;Lee, Hyang Burm
    • Mycobiology
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    • 제44권1호
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    • pp.29-37
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    • 2016
  • During a biodiversity survey of undiscovered taxa in Korea, two zygomycetous fungal strains were isolated. The first strain, EML-FSDY6-1 was isolated from a soil sample collected at Dokdo Island in the East Sea of Korea in 2013, and the second strain, EML-DG-NH3-1 was isolated from a rat dung sample collected at Chonnam National University garden, Gwangju, Korea in 2014. Based on the morphological characteristics and phylogenetic analysis of the internal transcribed spacer, 18S and 28S rDNA, actin and translation elongation $factor-1{\alpha}$ genes. EML-FSDY6-1 and EML-DG-NH3-1 isolates were confirmed as zygomycete species, Absidia pseudocylindrospora and Absidia glauca, respectively. Neither species has previously been described in Korea.

Molecular Phylogeny and Morphology Reveal the Underestimated Diversity of Mortierella (Mortierellales) in Korea

  • Lee, Jae-Sung;Nam, Bora;Lee, Hyang Burm;Choi, Young-Joon
    • 한국균학회지
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    • 제46권4호
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    • pp.375-382
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    • 2018
  • Members of the genus Mortierella (Mortierellales) are filamentous fungi, which are found on nearly all substrates, but more frequently in soil. Till date, 7 species of Mortierella have been reported in Korea, but being a ubiquitous group with high species diversity in temperate zones, this number is still low. During a survey of fungal biodiversity in Korea, we collected many isolates of Mortierella, and through morphological and molecular phylogenetic analyses, identified them to be 3 previously unrecorded species, namely, M. chienii, M. epicladia, and M. gamsii. A total of 10 Mortierella species in Korea, including the 3 species reported in the present study, are widely distributed in 5 out of 7 phylogenetic groups of this genus. This indicates that the diversity of Mortierella was so far underestimated in Korea. Multi-locus sequence analysis is required to provide a more reliable backbone for some uncertain phylogenetic groupings and to more clearly define a species of Mortierella, which would encourage deeper research in the diversity and ecological roles of Mortierella and allied genera.