• Title/Summary/Keyword: Endemic Plants

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De novo transcriptome sequencing and gene expression profiling with/without B-chromosome plants of Lilium amabile

  • Park, Doori;Kim, Jong-Hwa;Kim, Nam-Soo
    • Genomics & Informatics
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    • v.17 no.3
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    • pp.27.1-27.9
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    • 2019
  • Supernumerary B chromosomes were found in Lilium amabile (2n = 2x = 24), an endemic Korean lily that grows in the wild throughout the Korean Peninsula. The extra B chromosomes do not affect the host-plant morphology; therefore, whole transcriptome analysis was performed in 0B and 1B plants to identify differentially expressed genes. A total of 154,810 transcripts were obtained from over 10 Gbp data by de novo assembly. By mapping the raw reads to the de novo transcripts, we identified 7,852 differentially expressed genes (log2FC > |10|), in which 4,059 and 3,794 were up-and down-regulated, respectively, in 1B plants compared to 0B plants. Functional enrichment analysis revealed that various differentially expressed genes were involved in cellular processes including the cell cycle, chromosome breakage and repair, and microtubule formation; all of which may be related to the occurrence and maintenance of B chromosomes. Our data provide insight into transcriptomic changes and evolution of plant B chromosomes and deliver an informative database for future study of B chromosome transcriptomes in the Korean lily.

Monographic Study of the Endemic Plants in Korea Ⅶ. Taxonomy and Interspecific Relationships of the genus Callicarpa (한국 고유식물의 종속지 Ⅶ. 작살나무속식물의 분류와 종간유속관계)

  • 정영호
    • Journal of Plant Biology
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    • v.30 no.2
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    • pp.151-170
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    • 1987
  • Taxa of genus Callicarpa in Korea were described taxonomically and studied interspecific relationships, based on the leaf length, leaf width, peduncle length, fruit width and geograhic distribution. Among 12 taxa reported previously in Korea, 3 forms of C. japonica were unifed to original species, C. japonica var. glabra was reserved, Whereas C. shirasawana was not distributed in Korea. As a result, 7 taxa belonging to 3 species, 4 varieties of genus Callicarpa remained. C. japonica complex is considered to be more advanced among the species compared with the bract shapes.

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Monographic Study of the Endemic Plants in Korea IX. Taxonomy and interspecific relationships of the genus Melandrium (한국 고유식물의 종속지 IX. 장구채속식물의 분류와 종간유연관계)

  • 정영호
    • Journal of Plant Biology
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    • v.31 no.1
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    • pp.51-68
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    • 1988
  • To clarity the species of genus Melandrium (Caryophyllaceae) in Korea, the taxonomic characters were described and interspecific relationships were discussed to the extemal morphology with light and scanning electron microscopy. The position and size of appendages on petal, the shape and venation pattern of leaf, and the external morphology of seed and pollen were approved as the good characters to classify genus Melandrium in Korea. As the result, genus Melandrium in Korea could be arranged as 6 species, 1 variety, 1 forma. M. umbellatum was exclusively distributed in north Korea, and its taxonomic treatment was reserved.

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Flora Distributed in Mt. Geumgok, Gyeongju-si, Gyeongsangbuk-do (경상북도 경주시 금곡산에 분포하는 관속식물상)

  • You, Ju Han
    • Korean Journal of Plant Resources
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    • v.26 no.2
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    • pp.248-270
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    • 2013
  • The purpose of this study is to collect the raw data for conservation of plant ecosystem by surveying and analysing the flora of Mt. Geumgok located in Gyeongju-si, Gyeongsangbuk-do, Korea. The flora were summarized as 453 taxa including 91 families, 298 genera, 397 species, 4 subspecies, 46 varieties and 6 forms. The rare plants designated by Korea Forest Service were 3 taxa such as Eranthis byunsanensis B.Y.Sun, Potentilla discolor Bunge and Iris odaesanensis Y.N.Lee. The Korean endemic plants were 6 taxa such as Carpinus laxiflora (Siebold & Zucc.) Blume, Eranthis byunsanensis B.Y.Sun, Philadelphus schrenkii Rupr., Lespedeza maritima Nakai, Vicia chosenensis Ohwi and Weigela subsessilis (Nakai) L.H.Bailey. The specific plants by floristic region were 36 taxa such as Pinus koraiensis Siebold & Zucc., Salix chaenomeloides Kimura, Anemone raddeana Regel, Chloranthus japonicus Siebold, Euphorbia pekinensis Rupr., Ilex macropoda Miq., Ajuga multiflora Bunge, Saussurea odontolepis Sch.Bip. ex Herd, Viola orientalis (Maxim.) W.Becker, Betula davurica Pall., Vitex negundo var. incisa (Lam.) C.B.Clarke and Cimicifuga heracleifolia Kom.. The naturalized plants were 36 taxa such as Fallopia dumetorum (L.) Holub, Lepidium apetalum Willd., Robinia pseudoacacia L., Trifolium repens L., Euphorbia supina Raf., Ipomoea purpurea Roth, Veronica persica Poir., Bidens pilosa L., Carduus crispus L., Xanthium canadense Mill., Bromus unioloides H.B.K. and Festuca arundinacea Schreb.. The invasive alien plants were 2 taxa such as Ambrosia artemisiifolia L. and Aster pilosus Willd.. The ratios of the urbanized index(UI), the naturalized index(NI) and the disturbed index(DI) were 11.2%, 7.9% and 18.2% each.

Conservation Measures and Distribution of Vulnerable Species for Climate Change in Gayasan National Park (가야산국립공원 기후변화취약종의 분포 및 보전방안)

  • Kim, Yoon-Young;Leem, Hyosun;Han, Seahee;Ji, Seong-Jin;So, Soonku
    • Korean Journal of Plant Resources
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    • v.30 no.2
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    • pp.167-175
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    • 2017
  • We conducted a total of 28 surveys from March to October 2016 in Gayasan National Park, to identify threatened plants for climate change, as well as for the effective management of biological organisms and resources against climate changes in Korea. Regarding threatened plants for climate change, we identified a total of 39 taxa, with 11 northern, 2 southern, and 26 taxa of concern. Among these taxa, 33 were identified as wild species. The species threatened by climate change located in the subalpine regions of Gayasan National Park were Abies holophylla Maxim., Abies koreana Wilson, Pinus koraiensis Siebold & Zucc., Betula ermanii Cham., Berberis amurensis Rupr., Rhododendron tschonoskii Maxim., Vaccinium hirtum var. koreanum (Nakai) Kitam., Primula modesta var. hannasanensis T.Yamaz., Trientalis europaea var. arctica (Fisch.) Ledeb., Thymus quinquecostatus Celak., Parasenecio firmus (Kom.) Y.L.Chen, and Lilium cernuum Kom. These species are expected to be particularly vulnerable to the effects of global warming, since they were confirmed to have a very narrow vertical distribution range. Moreover, although the following species are not included in the list of plants threatened by climate change, it is assumed that the endemic species that grow at the summit, and Grade V floristics special plants, such as Pedicularis hallaisanensis Hurus., Allium thunbergii var. deltoides (S.O.Yu, S.Lee & W.Lee) H.J.Choi & B.U.Oh, Heloniopsis tubiflora Fuse, N.S.Lee & M.N. Tamura, Aletris glabra Bureau & Franch, and Gymnadenia cucullata (L.) Rich., will also be extremely vulnerable to climate change. Therefore, we believe that measures for the conservation of these species are urgently needed, and also that the definition of species threatened by climate change should be broadened to include more objective and valid taxa through the long-term monitoring of species distributed around the summit area.

Distributional Characteristics of Plant in Northern Region on Gyeonggi-Province (경기도 북부지역의 식물분포 특성)

  • Kang, Dae-Sung;Paik, Weon-Ki
    • Korean Journal of Plant Taxonomy
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    • v.37 no.1
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    • pp.41-59
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    • 2007
  • This study was to establish the floristic composition of northern region in Gyeonggi-Province area($126^{\circ}45^{\prime}-127^{\circ}37^{\prime}E$, $37^{\circ}31^{\prime}-38^{\circ}17^{\prime}N$). This work was investigated from April, 1988 to October, 2004. The flora of vascular plants of northern region in Gyeonggi-Province were consisted of total 2,030 taxa; 145 families, 656 genera, 1,611 species, 7 subspecies, 320 varieties, 1 subvarieties and 91 formae. Among them, Korean endemic species were composed of 46 families, 85 genera, 84 species, 35 varieties, 1 subvarieties, and 18 formae, total 138 taxa. The rare and endangered plants based on floral region indicated by Ministry of Environment were 416 taxa; V rank species 18 taxa, IV rank species 79 taxa, III rank species 111 taxa, II rank species 80 taxa, I rank species 128 taxa. Also the naturalized plants were 114 species, correspond to 39.7% of among total 287 species appeared in South Korea. the result of PCA, Gwangju mountain chain at northern region of Gyeonggi-Province has rich and diverse vascular plants, and there are many Korean endemic, rare and endangered plants. therefore Gwangju mountain chain must be the core axis in for conserving the plant biodiversity and richness.

Distribution of Vascular Plants in Namhan River, Chungju-si (충주시 남한강의 관속식물상 분포)

  • You, Ju-Han;Ahn, Young-Sup;Lee, Cheol-Hee
    • Korean Journal of Plant Resources
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    • v.25 no.2
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    • pp.209-224
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    • 2012
  • This study was carried out to survey the vascular plants of Namhan River located in Chungju-si, and the period of survey was from June, 2010 to June, 2011. The results are as follows. The vascular plants distributed in Neungam, Mokgye and Jangcheon around Namhan river were summarized as 225 taxa including 52 families, 164 genera, 200 species, 23 varieties and 2 forms. The rare plant designated by Korea Forest Service was $Aristolochia$ $contorta$ Bunge, and the endemic plant was identified as $Salix$ $koriyanagi$ Kimura. The specific plants by floristic region were 7 taxa including $Salix$ $chaenomeloides$ Kimura, $Aristolochia$ $contorta$ Bunge, $Actinostemma$ $lobatum$ Maxim., $Artemisia$ $selengensis$ Turcz., $Cirsium$ $pendulum$ Fisch., $Alisma$ $plantago-aquatic$ var. $orientale$ Samuels. and $Carex$ $versicaria$ L.. The naturalized plants were 47 taxa including $Fallopia$ $dumetorum$ (L.) Holub., $Chenopoidum$ $album$ L., $Silene$ $armeria$ L., $Brassica$ $juncea$ (L.) Czern., $Melilotus$ $alba$ Medicus, $Trifolium$ $pratense$ L., $Oenothera$ $erythrosepala$ Borb$\acute{a}$s, $Ipomoea$ $hederacea$ var. $integriuscula$ A.Gray, $Bidens$ $frondosa$ L., $Matricaria$ $inodora$ L., $Xanthium$ $canadense$ Mill., $Panicum$ $dichotomiflorum$ Michx. and so forth. In life forms, megaphanerophytes (M) were 13 taxa, 13 taxa in nanophanerophytes (N), 14 taxa inchamaiphytes (Ch), 40 taxa in hemicryptophytes (H), 20 taxa in geophytes (G), 103 taxa in therophytes (Th) and 22 taxa in hydrophytes (HH). The ratios of the naturalized index (NI), the urbanized index (UI) and the disturbed index (DI) were 20.9%, 14.6% and 18.2% in all sites.

Antioxidaitve and Antibacterial Activities of Endemic Plants Extracts in Korea (국내 자생 식물 추출물의 항산화 활성 및 항균효과)

  • Han, Seung-Ho;Woo, Na-Ri-Yah;Lee, Song-Deuk;Kang, Myung-Hwa
    • Korean Journal of Medicinal Crop Science
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    • v.14 no.1
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    • pp.49-55
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    • 2006
  • Antioxidative and antibacterial activities of endemic plants extracts in Korea were investigated. Hydrogen radical scavenging activity was 99.72% in an elm tree, 99.725 in a Job's tears, 99.575 in an eggplant, and 94.025 in a barrenwort. Antibacterial activity of ethanol extract from 23 different species of wild plants were determined. The gull nut was showed the strongest antibacterial activities (16.0-19.0 mm) and also showed high antibacterial activities in a pine neddles, a gulmyungja, a wild ginger plants, a ginko (9.5-11.5 mm). Only extracts of Saurrranceae extract showed the antibacterial activity in Bacillus subtilus, Stapylococcus aureus, Escherichia coli, Samonella entetotidis. An antibacterial activities were showed weakly in an esungcho and an eggplant. A ground ivy showed Antibacterial activity on Stapylococcus aureus. A barren wort showed in antibacterial activity on Stapylococcus aureus, and E. coli. This results were suggested that many edemic plants resources contains antioxidative and antibacterial substances.

Vascular Plant of the Construct-Reserved Site for Eco-Forest of Mt. Daeun in Yangsan-si, Gyeongsangnam-do (경남 양산 대운산 생태숲 조성예정지의 관속식물상 연구)

  • Kang, Meeyoung;Kim, Taewoon;Moon, Hyunshik
    • Journal of Environmental Impact Assessment
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    • v.28 no.3
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    • pp.231-244
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    • 2019
  • The purpose of this study is to offer the basic information for the rational management plan in construction and running of eco-forest by analyzing the vascular plant of the constructreserved site of eco-forest in Mt. Daeun, Yangsan-si, Gyeongsangnam-do. The vascular plants were 280 taxa; 75 families, 179 genera, 245 species, 3 subspecies, 28 varieties and 4 forma. The Korean endemic plants were 6 taxa including Pseudostellaria coreana, Stewartia pseudocamellia, Primula modesta var. hannasanensis and so forth. The rare plants were Juniperus chinensis var.sargentii, Prunus yedoensis, Primula modesta var. hannasanensis, Chionanthus retusus and Scopolia japonica. The naturalized plants were 14 taxa including Rumex acetosella, Lepidium apetalum, Trifolium repens, Oenothera biennis, Veronica persica and so forth. The invasive alien plants were Rumex acetosella and Ambrosia artemisiifolia. Specific plant species by floristic region were total 24 taxa; Prunus yedoensis and Primula modesta var. hannasanensis in class V, Juniperus chinensis var. sargentii and Acer pictum subsp. mono in class IV, 5 taxa including Dryopteris bissentiana, Scolopolia japonica and so forth in class III, Pseudostellaria coreana, Potentilla dickinsii and Chionanthus retusus in class II, 12 taxa including Acotinum jaluense, Clematis patens and so forth in class I.

Floristic study of Jeonggwangsan Mt. (Yongin, Korea) (정광산(용인시)의 관속식물상)

  • JEON, Ji-Hyeon;CHO, Myong-Suk;GIL, Hee-Young;KIM, Seon-Hee;JUNES, Petra;SEO, Hee-Seung;KIM, Seung-Chul
    • Korean Journal of Plant Taxonomy
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    • v.49 no.1
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    • pp.70-89
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    • 2019
  • In this study, we investigated the flora of Jeonggwangsan Mt. (Yongin, Korea) from May of 2015 to September of 2016. Through 14 independent field investigations, we identified a total of 367 taxa of vascular plants, including 89 families, 234 genera, 323 species, six subspecies, 34 varieties, and four formae. Eight taxa were endemic to Korea, while 27 were naturalized in Korea. Nineteen taxa were the floristic regional indicator plants in Korea: four in Rank VI, four in Rank III, two in Rank II, and nine in Rank I. A total of 59 taxa were designated as controlled Korean biological resources, requiring special permission for export to outside countries. Two taxa were listed on the Red List of Korea, including one Near Threatened (NT) taxon (Hololeion maximowiczii Kitam.) and one Least Concern (LC) taxon (Iris minutoaurea Makino).