• The Plant Pathology Journal
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• 제21권2호
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• pp.93-98
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• 2005

Molecular ecological studies of microbial communities revealed that only tiny fraction of total microorganisms in nature have been identified and characterized, because the majority of them have not been cultivated. A concept, metagenome, represents the total microbial genome in natural ecosystem consisting of genomes from both culturable microorganisms and viable but non-culturable bacteria. The construction and screening of metagenomic libraries in culturable bacteria constitute a valuable resource for obtaining novel microbial genes and products. Several novel enzymes and antibiotics have been identified from the metagenomic approaches in many different microbial communities. Phenotypic analysis of the introduced unknown genes in culturable bacteria could be an important way for functional genomics of unculturable bacteria. However, estimation of the number of clones required to uncover the microbial diversity from various environments has been almost impossible due to the enormous microbial diversity and various microbial population structure. Massive construction of metagenomic libraries and development of high throughput screening technology should be necessary to obtain valuable microbial resources. This paper presents the recent progress in metagenomic studies including our results and potential of metagenomics in plant pathology and agriculture.

• 한국산림과학회지
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• 제96권5호
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• pp.572-579
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• 2007

Tree species diversity is an important aspect of forest ecosystem stability. Tree species inventories at defined sites and in minimum diameter classes give a reliable indicator of the diversity level as well as the structural stability level of a study site. This study was conducted to investigate the species composition and the stand structure of the natural forest, timber-harvested forest (logged-over forest) and degraded forest of the Oak-twin Township in the Bago Yoma Region of Myanmar. Natural forest showed the highest family and species richness in all the investigated forests. At the family level, Verbenaceae occupied the highest importance value index (IVI) in all the forest stands while teak (Tectona grandis Linn. f.) occupied the highest IVI at the species level. However, the small diameter classes of T. grandis and other commercial species were less than those of big diameter classes in all the investigated forests. This abnormal pattern of diameter distribution could be a problem for the sustainable production of commercial timber species in the near future.

• Journal of Microbiology and Biotechnology
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• 제18권6호
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• pp.1016-1023
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• 2008

Lichens are predominant and important components of flora in the terrestrial ecosystem of Antarctica. However, relatively few researches on the phylogenetic position of Antarctic lichen-forming fungi have been accomplished. In this study, partial sequences of nuclear large subunit rDNAs from 50 Antarctic specimens were obtained and the phylogeny was reconstructed. Antarctic lichen species were distributed in 4 orders, including the monophyletic order Agyrales, paraphyletic orders Pertusariales and Teloschistales, and polyphyletic order Lecanorales. Species diversity was highest in the order Lecanorales, followed by Teloschistales and Pertusariales. Based on the phylogeny and sequence similarity analyses, it is proposed that the taxonomy of Stereocaulon alpinum, Physcia caesia, Usnea aurantiacoatra, and Cladonia species should be revised by careful examination of their phenotypic and molecular characteristics. Six species known to be endemic to Antarctica, Catillaria corymbosa, Himantormia lugubris, Leptogium puberulum, Pertusaria pertusa, Rhizoplaca aspidophora, and Umbilicaria antarctica, formed unique lineages, implying independent origins in the Antarctic area.

• 정보과학회 컴퓨팅의 실제 논문지
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• 제23권5호
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• pp.304-309
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• 2017

둘 이상의 프로그래밍 언어로 상호 작용하는 프로그램을 작성하고 사용하는 경우가 증가하고 있으나 그 무결점성을 확보하기는 어렵다. 프로그램 오류의 원인과 결과가 서로 다른 언어의 코드와 데이터에 존재할 경우 오류 제거의 난이도가 높아지고 Java Native Interface(JNI) 및 Python/C와 같은 프로그램 언어 인터페이스를 잘못 사용하여 새로운 종류의 프로그램 오류가 발생하기 때문이다. 프로그램 언어 상호 작용 오류를 해결하기 위한 프로그램 분석 기법과 도구가 활발히 연구 개발되었으나 이들을 평가하기 위한 프로그램 언어, 프로그램 언어 인터페이스 및 오류들의 실재성에 대한 고찰이 부족한 상황이다. 본 논문에서는 적지 않은 사용자를 가지는 우분투 소프트웨어 생태계 내에서 프로그래밍 언어의 다원성과 상호운영성을 실증적으로 조사하여 다중 언어 프로그래밍 연구의 실재성과 연구의 타당성을 실제 데이터 기반으로 확립하고자 한다.

• Asian-Australasian Journal of Animal Sciences
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• 제25권7호
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• pp.1045-1054
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• 2012

The phylogenetic diversity of the bacteria in hot composting samples collected from three spatial locations was investigated by molecular tools in order to determine the influence of gradient effect on bacterial communities during the thermophilic phase of composting swine manure with rice straw. Total microbial DNA was extracted and bacterial near full-length 16S rRNA genes were subsequently amplified, cloned, restriction fragment length polymorphism-screened and sequenced. The superstratum sample had the highest microbial diversity among the three samples which was possibly related to the surrounding conditions of the sample resulting from the location. The results showed that the sequences related to Bacillus sp. were most common in the composts. In superstratum sample, 45 clones (33%) and 36 clones (27%) were affiliated with the Bacillus sp. and Clostridium sp., respectively; 74 clones (58%) were affiliated with the Clostridium sp. in the middle-level sample; 52 clones (40%) and 29 clones (23%) were affiliated with the Clostridium sp. and Bacillus sp. in substrate sample, respectively. It indicated that the microbial diversity and community in the samples were different for each sampling site, and different locations of the same pile often contained distinct and different microbial communities.

• 한국물환경학회지
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• 제32권1호
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• pp.15-22
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• 2016

This study aims to analyze the changes in the benthic macroinvertebrate community before and after a restoration project in a eutrophic stream. Species diversity and species richness increased at the points where the channel changed from standing water to running water. However, species diversity and richness decreased at the points where only riparian restoration was implemented, and the concentration of suspended solids increased, while biochemical oxygen demand and total phosphorus decreased and the concentration of dissolved oxygen increased. In such reaches, functional feeding groups went from collector-filterers to collector-gatherers, and habitat orientation groups changed from clingers to burrowers.

• 한국조경학회지
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• 제33권2호
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• pp.48-59
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• 2005

The purpose of this study was to examine the ecological characteristics of herbaceous communities by systematic and scientific analysis of their structure and diversity in the Midongsan Arboretum and to offer raw data for a long-tenn monitoring study. The importance value and diversity index of species appearing in twenty plots from July to September, 2004 were analyzed and a management plan for these communities is presented. Vascular plants were represented by 60 taxa of 23 families, 51 genera, 50 species and 10 varieties. Based on the results of importance value analysis, the most dominant species was Artemisia princeps var. orientalis, followed by Setaria viridis and Erigeron canadensis. The diversity index analysis showed that plot no. 5 had the highest H' and H'_{max}$(2.0135 and 2.6391). It's species composition was comparatively more diverse and it's structure more stable than other plots. Artemisia montana and Dactylis glomerata showed the highest correlation between species. Because herbaceous communities are important biological habitats and provide important function in environmental conservation, it is important to properly preserve these communities. At the same time, in order to preserve genetic resources and improve spatial function, it may be necessary to consider removing herbaceous communities in certain areas. In the future, the relations between physicochemical soil properties and herbaceous communities should be examined and community movement should be studied.

• 한국응용곤충학회지
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• 제53권4호
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• pp.347-354
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• 2014

본 연구는 개벌 후 나비군집의 변화를 파악하기 위해서 실시하였다. 조사는 2011년 개벌지, 임도, 산림에서 5월부터 11월까지 선조사법을 실시했다. 조사결과, 총 32종 398개체의 나비가 관찰되었다. 먹이생태지위 범위와 서식처 유형에서의 나비 개체수는 개벌지가 산림보다 유의하게 높았다. 나비의 종수와 종다양도는 개벌지가 산림에 비하여 유의하게 높았다. 개벌지에서 환경부 취약종 기생나비와 은점표범나비의 많은 개체가 확인되었다. 본 연구결과, 개벌로 인하여 형성된 초지는 산림생태계에서 나비의 다양성을 높이는 중요한 역할을 한다.

• 해양환경안전학회지
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• 제25권3호
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• pp.354-365
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• 2019

Megabenthos samples were collected using 10-min trawls towed at 17 stations from 2015 to 2016. The dominant species (>1% of the total density) were Stegophiura sterea (10.4%) and two subtropical species, Mactrinula dolabrata (9.0%) and Acila divaricate (8.3%), respectively. The community structure of the megabenthos fell into four groups: the southeast, the southernmost region off Jeju Island, the frontal zone of the South Sea with C3, and a diagonal area from the south coast to the western side of Jeju Island. The total numbers of species, diversity, density and biomass were higher in the C3 region of the South Sea. Environmental factor analysis showed that differences in the megabenthos community were related to depth, gravel contents, and sorting value (${\sigma}$). These results indicate that changes in the marine environmental conditions in the South Sea of Korea affect the megabenthos species' composition and diversity.

• Journal of Ecology and Environment
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• 제45권4호
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• pp.218-227
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• 2021

Background: Artificial light at night has recently been identified as a major factor adversely affecting global insect diversity. Here, we compared the insect diversity in Gwangneung Forest Biosphere Reserve, specifically in the Korea National Arboretum (with no artificial light at night), with that of three nearby urban sites with a gradient of artificial light at night (five locations at each site). We analyzed the effects of the artificial night lighting index, mean annual temperature, and field light intensity (lux) at night on the insect community structure. Results: The urban sites generally exhibited higher species richness and abundance as well as clear indicator species compared with the control site. The size distribution of the collected insects markedly differed between the control and the three urban sites. The abundance of herbivorous and omnivorous insects increased and decreased, respectively, with the increase in light intensity. Species richness of herbivorous and omnivorous insects was likely correlated with the field light intensity at night and artificial night lighting index, respectively. Conclusions: This study demonstrates the association between nighttime environment and marked changes in insect community structure and revealed consequent transition of ecosystem services by changes in trophic group composition.