• Food Science of Animal Resources
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• v.44 no.1
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• pp.119-131
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• 2024

BIOVITA 3 bacterial species (BIOVITA 3), a probiotic blend powder containing Clostridium butyricum IDCC 1301, Weizmannia coagulans IDCC 1201, and Bacillus subtilis IDCC 1101, has been used as a food ingredient for gut health. However, its efficacy in improving constipation has not been reported. Therefore, we aimed to investigate the functional effects of oral administration of BIOVITA 3 as well as its component strains alone (at 1.0×10⁹ CFU/day) in Sprague-Dawley (SD) rats with loperamide-induced constipation. The study included fecal analysis, gastrointestinal transit ratio, histopathological analysis, short chain fatty acids (SCFAs), and metagenome analysis. As results, the BIOVITA 3 group showed significant improvements in fecal number, water content, gastrointestinal transit ratio, and thickening of the mucosal layer. In the SCFAs analysis, all probiotic-treated groups showed an increase in total SCFAs compared to the loperamide-constipated group. Changes in microbial abundance and the diversity index of three groups (normal, constipated, and BIOVITA 3) were also defined. Of these, the BIOVITA 3 showed a significant improvement in loperamide-constipated SD-rats. This study suggests the possibility that BIOVITA 3 can be applied as an ingredient in functional foods to relieve constipation.

• Journal of Microbiology and Biotechnology
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• v.33 no.12
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• pp.1543-1551
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• 2023

The recently published high-resolution R388 T4SS structure provides exciting new details about the complete complex of T4SS, including the components making up the stalk and arches, numerous symmetry mismatches between regions of the complex, and an intriguing interpretation of the closed stalk and radial symmetry of the inner membrane complex, which is related to pilus biogenesis assembly. However, there are a few unidentified densities in the electron microscopy map and portions of the identified component sequences for which the structure is not yet known. It is also unclear how well this minimized DNA-transporting T4SS predicts the structure of other T4SSs, such as expanded systems and those that transport proteins rather than DNA. In this review, we evaluate what can be inferred from the recent high-resolution structure of the R388 T4SS with respect to the Cag and Dot/Icm systems. These systems were selected because, given what is currently known about these systems, we expect them to present most structural differences compared to the R388 T4SS structure. Furthermore, we discuss bacterial physiology and diversity, the T4SS structures and their variations between different bacterial species. These insights may prove beneficial for researchers who elucidate the structure and functions of T4SS in different bacterial species.

• International Journal of Knowledge Content Development & Technology
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• v.14 no.4
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• pp.101-111
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• 2024

Multilingual Knowledge Graphs (MKGs) have emerged as a crucial component in various natural language processing tasks, enabling efficient representation and utilization of structured knowledge across multiple languages. One can get data, information, and knowledge from various sectors, like libraries, archives, institutional repositories, etc. Variable quality of metadata, multilingualism, and semantic diversity make it a challenge to create a digital library and multilingual search facility. To accept these challenges, there is a need to design a framework to integrate various structured and unstructured data sources for integration, unification, and sharing databases. These are controlled using linked data and semantic web approaches. In future, multilingual knowledge graph overcomes all the linguistic nuances, technical barriers like semantic interoperability, data harmonization etc and enhance cooperation and collaboration throughout the world. Through a comprehensive analysis of the current state-of-the-art techniques and ongoing research efforts, this paper aims to offer insights into the future directions and potential advancements in the field of Multilingual Knowledge Graphs. This paper deals with a multilingual knowledge graph and how to build up a multilingual knowledge graph. It also focuses on the various challenges and opportunities for designing multilingual knowledge graphs.

• Korean Journal of Medicinal Crop Science
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• v.13 no.1
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• pp.30-34
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• 2005

Polygonatum species are a useful medical crop in Korea but basic study in the species was not well conducted. The study was carried out to analyse genetic diversity and intraspecific relationship of 47 Polygonatum species collected from Gyeongnam province. Their analysis was done through principle component analysis and average linkage cluster analysis with their twelve morphological traits. The result of principle component analysis showed the Prin 1, Prin 2 and Prin 3 represented 79% of total variation. By the 0.7 average distance of the cluster analysis and the calculated Euclidian distance, the 47 collected species were grouped into five groups. Group I included 22 collected species representing P. ordoratum var. pluriflorum, group II did 5 ones representing P. involucratum, group III was divided into two subclasses, 2 species including P. inflatum and 7 species including P. thunbergii, group IV also consisted of 2 subclasses, a species similar to P. thunbergii and P.involucratum, respectively, and finally group V included 8 species representing P.lasianthum var. coreanum. meaning that the useful germplasms can be collected from relatively small area.

• Korean Journal of Environmental Biology
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• v.39 no.4
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• pp.559-572
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• 2021

A survey was conducted to analyze water masses and spatial distributions of phytoplankton communities at 15 stations on the surface and chlorophyll a maximum layers (CML) in the western South Sea of Korea from September 8 to 9, 2021. As a result, water masses were classified into Coastal Waters (CW) with relatively low salinity, the Tsushima Warm Current (TWC) with high water temperature and high salinity, and mixed waters (MW) showing a mixture of these two water masses. Turbidity showed high concentration in both the surface and CML. The chlorophyll a concentration was as low as 0.90±0.43 ㎍ L^-1 in the surface, more than 1.1 ㎍ L^-1 in CW, around 1.0 ㎍ L^-1 in MW, and less than 0.5 ㎍ L^-1 in the TWC. CML was 1.64±0.54 ㎍ L^-1. Regarding species composition of phytoplankton communities, there were 57 species in 31 genera(diatoms, 57.8%; dinoflagellates, 35.1%; and other phytoflagellates, 7.1%). The phytoplankton standing crop had 4.6±7.6 cells mL^-1 in the surface, more than 30 cells mL^-1 in the CW, 2-5 cells mL^-1 in the MW, and less than 2 cells mL^-1 in the TWC. CML was slightly higher than the surface with a variation of 5.7±8.4 cells mL^-1. Dominant species were found to be Rhizosolenia flagilissima f. flagilissima, Skeletonema costatum-ls, and Nitzschia sp./ small size in the surface. For the CML Rh. flagilisima f. flagilissima showed a dominance of 12.0%. For the surface, the diversity variation was 2.36±0.40, which was high for TWC but low for MW. For CML, the diversity variation was 2.29±0.52, which was slightly lower than that of the surface. The dominance in the surface was 0.50±0.15, with a fluctuation range of more than 0.5 in MW and less than 0.5 in the TWC, which was different from the diversity. According to correlation analysis and principal component analysis (PCA), the presence of phytoplankton standing crops was high in CW but low in MW and TWC. That is, phytoplankton communities in early autumn were strongly affected by the expansion and mixing of water masses in western South Sea.

• Korean Journal of Environment and Ecology
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• v.28 no.3
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• pp.302-313
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• 2014

This study was conducted to compare the characteristics of fish distribution according to sand type stream and cobble type stream the 4 stream selected every season. The collected Korea endemic species during the survey period were 24, including Acheilognathus gracilis. Dominant species of Hongcheon stream and Muju Namdae stream was Zacco koreanus, each accounting for 39.9% and 28.4% in order, and dominant species in Yanghwa stream was Rhodeus notatus, 13.6%, and those in Gap stream was Z. platypus, by 26.0%. As a result of community analysis, dominant index was 0.27~0.63, diversity index was 1.92~2.67, evenness index was 0.6~0.79, richness index was 3.09~3.53, and dominant index was the highest in Hongcheon stream, and the indices of diversity, evenness and richness were the highest in Yanghwa stream. As a result of tolerance guild analysis, Hongcheon stream and Muju Namdae stream with a variety of substrates accounted for relatively higher rate by 50.1% and 46.4% in sensitive species respectively, and Yanghwa stream and Gap stream with greater sand substrates had 0.5% and 5.3% scarce rate of sensitive species. As a result of similarity analysis using the species, population and substrate structures of the fisheries appeared in each stream, cobble type streams such as Hongcheon stream and Muju Namdae stream were the most similar by 50.4% in species and population, 95.2% in bed structure. As a result of IBI analysis, Hongcheon stream and Muju Namdae stream appeared as 'Class A,' Yanhwa stream and Gap stream as 'Class B' and the two groups of cobble type stream and sand type stream were divided as a result of principal components analysis.

• Korean Journal of Remote Sensing
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• v.31 no.3
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• pp.205-214
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• 2015

In this study, a novel land-cover classification framework for multi-temporal SAR data is presented that can combine multiple features extracted through data transforms and multiple classifiers. At first, data transforms using principle component analysis (PCA) and 3D wavelet transform are applied to multi-temporal SAR dataset for extracting new features which were different from original dataset. Then, three different classifiers including maximum likelihood classifier (MLC), neural network (NN) and support vector machine (SVM) are applied to three different dataset including data transform based features and original backscattering coefficients, and as a result, the diverse preliminary classification results are generated. These results are combined via a majority voting rule to generate a final classification result. From an experiment with a multi-temporal ENVISAT ASAR dataset, every preliminary classification result showed very different classification accuracy according to the used feature and classifier. The final classification result combining nine preliminary classification results showed the best classification accuracy because each preliminary classification result provided complementary information on land-covers. The improvement of classification accuracy in this study was mainly attributed to the diversity from combining not only different features based on data transforms, but also different classifiers. Therefore, the land-cover classification framework presented in this study would be effectively applied to the classification of multi-temporal SAR data and also be extended to multi-sensor remote sensing data fusion.

• Journal of Wetlands Research
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• v.10 no.3
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• pp.111-124
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• 2008

The changes in flora and distribution and structure of vegetation were monitored for seven years at a restored reach of an urban stream, the Yangjae Stream, southeast of Seoul, Korea. In the restored reach, diverse kinds of the close-to-nature stream restoration techniques were adapted and implemented in the winter of 1998-1999. The species numbers and diversity indices of riparian plants at the restored reach were higher than those at the unrestored reach seven years after the restoration implementation. But plant diversity was decreased from the early restoration stage of 1999 - 2001 to seven years after the implementation. The dominant species changed from a ruderal annual, Humulus japonicus, to a perennial, Phragmites australis. The floral structure was distinctly different between in the early stage and seven years later on the results of principal component analysis (PCA) because of decreasing in numbers of exotic or ruderal species and planted or introduced plants in newly disturbed habitats. The distribution areas of communities of Humulus japonicus and Erigeron annuus were decreased and those of communities Phragmites australis and Miscanthus sacchariflorus were increased after the restoration implementation. The results of detrended correspondence analysis (DCA) of plant communities revealed that the community structure were changed from the disturbed vegetations to the stable and natural vegetation after the restoration implementation. Total seven species of willows were found at the restored reach, of which two species were planted and the others were naturally introduced. The monitoring results showed that the stream ecosystem of the study reach were successfully recovered in flora and vegetation and could be used as a model site for the stream restoration in urban streams.

• Ecology and Resilient Infrastructure
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• v.2 no.1
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• pp.22-32
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• 2015

This study investigated the difference in fish community structures in a main channel and an isolated former channel, considering the environmental factors in the Mangyeong River, Korea. Principal component analysis (PCA) with environmental factors showed that former channels were composed of a fine substrate covered by in-stream vegetation, whereas the main channel was covered by a wide range of substrates with a higher dissolved oxygen and conductivity. The result of the hierarchical cluster analysis with species abundance delineated to the four main groups; three abandoned channel groups and one main channel group. Non-metric multidimensional scaling (NMDS) showed that fish community structures of each study site differed from environmental factors: former channel fish communities were positively related to in-stream vegetation cover, whereas main channel fish communities were positively associated with dissolved oxygen and conductivity. The results indicated that channelization, where there was a separation between the former channel and the main channel, had detrimental effects on fish community structures of both the main channel and the abandoned channel in the Mangyeong River. In conclusion, this study suggested that the connectivity between the main channel and abandoned channel were required to enhance both habitat structural diversity and species diversity of the Mangyeong River.

• Journal of Korean Society of Forest Science
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• v.94 no.6
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• pp.462-467
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• 2005

This study aims to classify the biotope types and evaluate its functions for acquiring the basic information which can support the landscape ecological management of the urban forest in the case of the three parks in Daegu metropolitan city and then to analyze vegetation landscape patterns. The biotope classification was mostly divided into 5 to 6 biotope type groups in the high units and 15 to 20 biotope types belong to them and then could know that the more big the park size, the more diverse and large the biotope types and its average area. The biotope grade over the three parks was dominating low rank grade (1 to 3 grade) 72.7% that forest organism is inadequate as live, and high grade (7 to 9 grade) did not appear entirely. Most in Biotope function estimation were appeared less than the middle rank grade and biotope area is bigger, those grade rises and temperature could know that is fallen. Vegetation landscape patterns was very simple because only two kinds of Robinia pseudo-acacia and Quercus acutissima is appeared as the dominated landscape elements in all of the three parks. And also because average area of those elements is generally 1ha or so, there was much problems in consecutiveness of functional role as forest ecosystem component. Conclusively, Ecological landscape management need to improve Biotope diversity and functionality, and it secures ecological minimal area and space linkage.