• Title/Summary/Keyword: Diversity Component

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Determination of Genetic Diversity among Korean Hanwoo Cattle Based on Physical Characteristics

  • Choi, T.J.;Lee, S.S.;Yoon, D.H.;Kang, H.S.;Kim, C.D.;Hwang, I.H.;Kim, C.Y.;Jin, X.;Yang, C.G.;Seo, K.S.
    • Asian-Australasian Journal of Animal Sciences
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    • v.25 no.9
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    • pp.1205-1215
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    • 2012
  • This study was conducted to establish genetic criteria for phenotypic characteristics of Hanwoo cattle based on allele frequencies and genetic variance analysis using microsatellite markers. Analysis of the genetic diversity among 399 Hanwoo cattle classified according to nose pigmentation and coat color was carried out using 22 microsatellite markers. The results revealed that the INRA035 locus was associated with the highest $F_{is}$ (0.536). Given that the $F_{is}$ value for the Hanwoo INRA035 population ranged from 0.533 (white) to 1.000 (white spotted), this finding was consistent with the loci being fixed in Hanwoo cattle. Expected heterozygosities of the Hanwoo groups classified by coat colors and degree of nose pigmentation ranged from $0.689{\pm}0.023$ (Holstein) to $0.743{\pm}0.021$ (nose pigmentation level of d). Normal Hanwoo and animals with a mixed white coat showed the closest relationship because the lowest $D_A$ value was observed between these groups. However, a pair-wise differentiation test of $F_{st}$ showed no significant difference among the Hanwoo groups classified by coat color and degree of nose pigmentation (p<0.01). Moreover, results of the neighbor-joining tree based on a $D_A$ genetic distance matrix within 399 Hanwoo individuals and principal component analyses confirmed that different groups of cattle with mixed coat color and nose pigmentation formed other specific groups representing Hanwoo genetic and phenotypic characteristics. The results of this study support a relaxation of policies regulating bull selection or animal registration in an effort to minimize financial loss, and could provide basic information that can be used for establishing criteria to classify Hanwoo phenotypes.

Vegetation Composition and Structure of Mt. - Kumbong, Uiseong-Gun, Korea (의성 금봉산일대 산림식생의 조성 및 구조)

  • Bae Kwan-Ho;Lee Jung-Hyo;Kim Dong-Geun
    • Korean Journal of Agricultural and Forest Meteorology
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    • v.7 no.4
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    • pp.303-310
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    • 2005
  • Vegetation composition and structure of forest community around Mt. Kumbong, Uiseong-Gun, Korea, were studied using a qualitative and a quantitative approach. Vegetation types and various ecological characteristics including constancy classes, relative coverage, species diversity and interspecific similarity of the major component species were analyzed. Seventy relatives were sampled in $100 m^2$ plots. Forest communities were grouped into mountain vegetation and lower-valley vegetation. The former were divided into 3 communities (Quercus mongolica, Quercus variabilis and Quercus dentata communities). The latter was an Acer mono community. Vegetation units were classified into ten groups. Woody vegetation coverage was $50\~65\%$. The lower-valley vegetation type showed from $2.06\pm0.25\;to\;2.31\pm0.26$ in the species diversity. The species showing interspecific similarity over 0.5 with Quercus mongolica appeared to be Pinus densiflora, Quercus dentata and Tilia amurensis in the tree and subtree layer, and Lindera obtusiloba, Fraxinus sieboldiana, Carex humilis and Carex siderostica in the shrub and herb layer, The species showing higher interspecific similarity with Acer mono were Cornus controversa and Ulmus davidiana in the tree and subtree layer, and Philadelphus schrenchkii and Aristolochia manshuriensis in the shrub and herb layer.

Phenotypic Diversity among 575 Cultivated Soybean Landraces Collected from Different Provinces in Korea: A Multivariate Analysis

  • Kebede Taye Desta;Yu-Mi Choi;Young-ah Jeon;Myoung-Jae Shin;Hye-myeong Yoon;Wang XiaoHan;Hyeon-seok Oh;Young-Wan Na;Ho-cheol Ko;Na-young Ro;JungYoon Yi
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.69 no.2
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    • pp.97-110
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    • 2024
  • This study investigated 575 cultivated soybean landraces from different provinces in Korea, using 17 key agromorphological traits. The studied soybeans showed wide variations in both qualitative and quantitative traits, signifying the existence of genetic diversity. The standardized Shannon-Weaver index (H') ranged from 0.3 to 1.0, with seed-related traits having an H' value higher than 0.7. Similarly, quantitative traits showed significant variation, with the coefficient of variation ranging from 7.2% for days to maturity (DM) to 62.3% for the number of pods per plant (PPP). In terms of province, the Gyeongsangbuk-do and Gyeongsangnam-do accessions differed from the other accessions, with higher proportions of green and yellow seed coats and lower proportion of black hilums. Gyeongsangnam-do accessions also showed early maturation and flowering but had the lowest average one-hundred seeds weight (HSW). In contrast, Jeollanam-do accessions flowered and matured late but had the highest average seed weight per plant (SWPP). Hierarchical cluster analysis grouped the soybeans into 12 clusters, and further statistical analysis showed significant variations in all quantitative traits (p < 0.05). Principal component analysis grouped the accessions based on the clusters. DM, PPP, HSW, and SWPP were identified as major contributors to the observed variance along the axes of the first two principal components. Correlation analysis revealed significant associations between maturity and yield-related traits. Based on their relative performance, 37 promising accessions were identified. Overall, this study highlights the diversity of recently cultivated Korean soybean landraces and provides opportunities for future metabolomic and genomic studies.

Historical Introduction of Japanese Wild Mice, Mus musculus, from South China and the Korean Peninsula

  • Nunome, Mitsuo;Suzuki, Hitoshi;Moriwaki, Kazuo
    • Animal Systematics, Evolution and Diversity
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    • v.29 no.4
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    • pp.267-271
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    • 2013
  • In Japan, the wild house mouse Mus musculus consists of two lineages, one from Southeast Asia (Mus musculus castaneus; CAS) and one from northern Eurasia (Mus musculus musculus; MUS). However, the exact origins of the parental lineages are unclear. A recent work using mitochondrial sequences revealed that Japanese CAS and MUS are closely related to haplotypes from South China and the Korean Peninsula, respectively. Recent phylogeographic analyses using nuclear gene sequences have also confirmed a close relationship between Japan and Korea in the MUS component. However, the Japanese CAS components in the nuclear genome are likely to be unique and to differ from those of other CAS territories, including South China. Although the origins are still unresolved, these results allow us to conclude that two areas of the continent, South China and the Korean Peninsula, are the primary source areas of Japanese wild mice and suggest pre-historical introductions associated with certain historical agricultural developments in East Asia.

Diversity and Genetic Relationships among Seven West African Goat Breeds

  • Missohou, A.;Talaki, E.;Laminou, I. Maman
    • Asian-Australasian Journal of Animal Sciences
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    • v.19 no.9
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    • pp.1245-1251
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    • 2006
  • This study was carried out to determine the genetic relationships among seven west African goat breeds : Casamance Goat (Kolda, Senegal), Labe Goat (Fouta Djallon, Guinea), three Sahel Goat (Djoloff, Senegal ; Maradi, Niger; Gorgol, Mauritania) red Sokoto Goat (Maradi, Niger) and Guera goat (Atar, Mauritania).The polymorphism of six microsatellites and the ${\alpha}_{s1}$-casein locus was analysed. The six microsatellite loci were polymorphic with a mean number of alleles ranging from 2.71 to 4.0. At the ${\alpha}_{s1}$-casein locus, A and B were the most frequent alleles, which are known to be associated with a high level of protein synthesis. A neighbour-joining tree and a Principal Component Analysis were performed and the reliability of both methods was tested. Our study shows that the genetic relationships among the breeds analysed correspond to their geographical distribution and in addition, that the Labe Goat is strongly separated from the other breeds. Among the seven markers used, four have an effect on the distribution of breeds while three seem to be non-informative.

A Study on the Characteristics of the Component of Argumentation in the Process of Solving Scientific Argument Tasks among Elementary Students (과학적 맥락의 논의 과제 해결 과정에서 나타나는 초등학생들의 논의 과정 요소의 특성에 관한 연구)

  • Lee, Seok-Hee;Seo, Bong-Hee;Kim, Yong-Gwon
    • Journal of Korean Elementary Science Education
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    • v.26 no.1
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    • pp.76-86
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    • 2007
  • The purpose of this study is to investigate the characteristics of scientific argumentation and its development in the process of mutual discussion activities by elementary school students in the 5th grade. The results of this study can be summarized as below: First, students used diversity argumentation components for solving the given argumentation theme, however, most students used the assertion or the basis of a simple expression of their own thoughts as a high ratio, and components of a one directional explanatory argumentation process rather than components of a mutual communicative argumentation process. Second, an asymmetric group showed a high-use ratio of communicative argumentation components and achieved argumentation activities harmoniously between a symmetric group and an asymmetric group in organization of groups for solving argumentation themes. It was found that students in the transitional period showed the highest rate of participation within the discussion process. Moreover, they also showed the highest rate of development of discussion skills whilst in the process of using scientific problems. In conclusion, this phenomenon is caused by highlighting the mutual action between the teacher and the student rather than placing an emphasis on the mutual action among students during field instructions.

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An Analysis of Genetic Variation and Divergence on Silk Fibre Characteristics of Multivoltine Silkworm (Bombyx mori L.) Genotypes

  • Kumaresan P.;Koundinya P. R.;Hiremath S. A.;Sinha R. K.
    • International Journal of Industrial Entomology and Biomaterials
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    • v.14 no.1
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    • pp.23-32
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    • 2007
  • The nature of genetic variation and diversity among the 65 multivoltine silkworm genotypes was evaluated for 16 post cocoon characters. The components of genetic variation revealed higher PCV (60.487%) and GCV (44.56%) for evenness (variation 1) followed by cohesion (PCV=55.38%, GCV=40.36%) and non-broken filament length (PCV=32.05%, GCV=31.28%). The higher heritability ($h^2$ in broad sense) was observed for boil-off loss (95.6%) followed by non-broken filament length (95.22%). The both genotypic and phenotypic correlation indicated significant positive correlation of filament length with non-broken filament length, silk recovery, raw silk, neatness, and low neatness; and negative correlation with denier, renditta and silk waste. The principal component analysis (PCA) revealed 75.381 % of total variance from the five principal components extracted. On the basis of Mahalonobis' $D^2$ values (Ward's minimum variance), the sixty-five multivoltine silkworm genotypes were classified in to 9 clusters with substantial inter and intra cluster distances. Number of genotypes included in different clusters varied from 3 to 17. The results indicated that the optimum distance obtained in cluster VII (15.059) along with higher cluster mean values especially for filament length, non broken filament length, renditta, silk recovery, silk waste, and raw silk emphasized the utilization of these genotypes in the conventional silkworm breeding programme for improvement of multivoltine silk fibre quality. The possibility of exploiting genetic variation in post cocoon traits for efficient breeding programme is discussed.

Stability condition for the evaluation of damage in three-point bending of a laminated composite

  • Allel, Mokaddem;Mohamed, Alami;Ahmed, Boutaous
    • Steel and Composite Structures
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    • v.15 no.2
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    • pp.203-220
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    • 2013
  • The study of the tensile strength of composite materials is far more complex than analysis of the properties of elasticity and plasticity. Indeed, during mechanical loading, micro-cracks in the matrix, the fibers break, debonding of the interfaces are created. The failure process of composites is of great diversity and cannot be described if even we know: the strength criterion of each individual component, the state of stress and strain in the material, the propagation phenomena cracks in the structure and nature of the interface between the matrix and the reinforcement. This information is only partially known and the obtained by the analysis of a stress limit beyond which there is destruction of the material is almost impossible. To partially process the issue, a solution lies in a mesoscopic approach of seeking a law to locate the ultimate strength of the material for a plane stress state. Tests on rectangular plates in bending PEEK/APC2 and T300/914 three were made and this in order to validate our approach, the calculation has been implemented in a nonlinear finite element code (Castem 2000), in order to make comparison with the numerical results. The results show good agreement between numerical simulation and the two materials; however, it would be interesting to consider other phenomena in the criterion.

Application of Discrete Wavelet Transform for Detection of Long- and Short-Term Components in Real-Time TOC Data (실시간 TOC 자료의 장.단기 성분의 검출을 위한 이산형 웨이블렛 변환의 적용)

  • Jin, Young-Hoon;Park, Sung-Chun
    • Journal of Environmental Science International
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    • v.15 no.9
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    • pp.865-870
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    • 2006
  • Recently, Total Organic Carbon (TOC) which can be measured instantly can be used as an organic pollutant index instead of BOD or COD due to the diversity of pollutants and non-degradable problem. The primary purpose of the present study is to reveal the properties of time series data for TOC which have been measured by real-time monitoring in Juam Lake and, in particularly, to understand the long- and short-term characteristics with the extraction of the respective components based on the different return periods. For the purpose, we proposed Discrete Wavelet Transform (DWT) as the methodology. The results from the DWT showed that the different components according to the respective periodicities could be extracted from the time series data for TOC and the variation of each component with respect to time could emerge from the return periods and the respective energy ratios of the decomposed components against the raw data.

Composition of the insect diet in feces of yellow-throated marten, Martes flavigula, in Jirisan National Park, South Korea

  • Choi, Moon Bo;Woo, Donggul;Choi, Tae Young
    • Journal of Ecology and Environment
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    • v.38 no.3
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    • pp.389-395
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    • 2015
  • The composition of the Martes flavigula diet has been extensively studied, but little is known about its insect component. This study characterized the insect diet and insect nest materials in the feces of M. flavigula. A total of 952 fecal samples were collected in Jirisan National Park from January 2009 to November 2011, and 1379 species or taxonomic groups were identified. M. flavigula fed on insects (8.7%) and bee wax (5.0%), which comprised 2.9% and 4.4% of the dry weight of M. flavigula feces, respectively. A total of 12 insect species belonging to 8 families in 3 orders were identified. The most frequently found insects were Hymenoptera (frequency of occurrence, FO, 89.1), including Vespa simillima simillima (FO, 37.3) and Vespula koreensis koreensis (FO, 20.0). The Vespidae constituted the majority of the insect diet in autumn when the diversity of marten's prey was strongly reduced, probably because the numbers of social insects were sufficient for M. flavigula. In addition, the data suggest that M. flavigula attacks the nests of social wasps in late autumn when males do not have a venomous sting and new queens are less aggressive than workers. Bee wax appeared in all seasons and the highest rate was from spring to early summer. However, the remains of honeybees were not found in feces; thus, M. flavigula presumably eats honey but not honeybees.