• 제목/요약/키워드: Deoxyribonucleic acid (DNA)

검색결과 70건 처리시간 0.021초

Synthesis, Characterization and DNA Interaction Studies of (N,N'-Bis(5-phenylazosalicylaldehyde)-ethylenediamine) Cobalt(II) Complex

  • Sohrabi, Nasrin;Rasouli, Nahid;Kamkar, Mehdi
    • Bulletin of the Korean Chemical Society
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    • 제35권8호
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    • pp.2523-2528
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    • 2014
  • In the present study, at first, azo Schiff base ligand of (N,N'-bis(5-phenylazosalicylaldehyde)-ethylenediamine) ($H_2L$) has been synthesized by condensation reaction of 5-phenylazosalicylaldehyde and ethylenediamine in 2:1 molar ratio, respectively. Then, its cobalt complex (CoL) was synthesized by reaction of $Co(OAc)_2{\cdot}4H_2O$ with ligand ($H_2L$) in 1:1 molar ratio in ethanol solvent. This ligand and its cobalt complex containing azo functional groups were characterized using elemental analysis, $^1H$-NMR, UV-vis and IR spectroscopies. Subsequently, the interaction between native calf thymus deoxyribonucleic acid (ct-DNA) and CoL complex was investigated in 10 mM Tris/HCl buffer solution, pH = 7 using UV-vis absorption, thermal denaturation technique and viscosity measurements. From spectrophotometric titration experiments, the binding constant of CoL complex with ct-DNA was found to be $(2.4{\pm}0.2){\times}10^4M^{-1}$. The thermodynamic parameters were calculated by van't Hoff equation.The enthalpy and entropy changes were $5753.94{\pm}172.66kcal/mol$ and $43.93{\pm}1.18cal/mol{\cdot}K$ at $25^{\circ}C$, respectively. Thermal denaturation experiments represent the increasing of melting temperature of ct-DNA (about $0.93^{\circ}C$) due to binding of CoL complex. The results indicate that the process is entropy-driven and suggest that hydrophobic interactions are the main driving force for the complex formation.

$1-{\beta}-D-Arabinofuranosylcytosine$이 Mouse의 간세포소기관(肝細胞小器官)에 미치는 영향(影響) (Effect of $1-{\beta}-D-Arabinofuranosylcytosine$ on the Cytoplasmic Organelles of the Hepatocytes in Albino Mice)

  • 김수연;이규식
    • Applied Microscopy
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    • 제13권1호
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    • pp.13-30
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    • 1983
  • [ $1-{\beta}-D-Arabinofuranosylcytosine$ ](ara-C), which is a pyrimidine nucleoside analog is cytotonic to mammalian cells in culture and is active in vitro and in vivo against a variety of DNA viruses. The precise mechanism of action of ara-C has not been determined, although ara-C is thought to act as an antimetabolite, interfering with the synthesis of deoxyribonucleic acid(DNA). Cytosine arabinoside originally seemed to act principally by inhibiting the conversion of cytidine to deoxytidine, thus inhibiting DNA synthesis. But recent data suggest that effects upon DNA polymerase and effects via incorporation into DNA and RNA may well be of equal importance. The author have demonstrated the effect of cytosine arabinoside on the hepatocytes of albino mice treated with ara-C, observing changes in the cytoplasmic organelles of the hepatocytes. A total of 120 healthy male albino mice were divided into the control and ara-C treated groups. The animals of the ara-C group were given 10mg. per kg of body weight of mouse ara-C in physiological saline solution and the animals of control group were given physiological saline solution, intraperitoneally. After an administration of ara-C or physiological saline solution, the animal were killed at. interval of 6, 12, and 24 hours. The specimens, which were obtained from the left anterier lobe of the liver, were stained with uranyl acetate and lead citrate and observed with JEM 100B electron microscope. The results were obtained as follow: A pronounced dilatation, sacculation and fragmentation of the cisterane of rough endoplasmic reticulum with dissociation of membrane bound-ribosomes, disaggregation of free ribosomes in the cytoplasm, proliferation of the smooth endoplasmic reticulum associated with depletion of glycogen paracles, atrophies of Golgi complex, production of numerous lipid droplets, and formation of antophagic vacuoles, multivesicular bodies and residual bodies are recognized in the hepatocytes of ara-C treated mice. Consequently it is suggested that cytosine arabinoside would induce a changes of the cytoplasmic organelles of the hepatocytes in albino mice.

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Arabidopsis cyclin D2 expressed in rice forms a functional cyclin-dependent kinase complex that enhances seedling growth

  • Oh, Se-Jun;Kim, Su-Jung;Kim, Youn Shic;Park, Su-Hyun;Ha, Sun-Hwa;Kim, Ju-Kon
    • Plant Biotechnology Reports
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    • 제2권4호
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    • pp.227-231
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    • 2008
  • D-class cyclins play important roles in controlling the cell cycle in development and in response to external signals by forming the regulatory subunit of cyclin-dependent kinase (CDK) complexes. To evaluate the effects of D-class cyclins in transgenic rice plants, Arabidopsis cyclin D2 gene (CycD2) was linked to the maize ubiquitin1 promoter (Ubi1) and introduced into rice by the Agrobacterium-mediated transformation method. Genomic deoxyribonucleic acid (DNA), ribonucleic acid (RNA), and Western blot hybridizations of the Ubi1:-CycD2 plants revealed copy number of transgene and its increased expression in leaf and callus cells at messenger RNA (mRNA) and/or protein levels. The H1 kinase assay using the immunoprecipitates of protein extracts from the Ubi1:CycD2 plants and nontransgenic controls demonstrated that the introduced Arabidopsis CycD2 forms a functional CycD2/CDK complex with an unidentified CDK of rice. Shoot and root growth was enhanced in the Ubi1:CycD2 seedlings compared with nontransgenic controls, together, suggesting that Arabidopsis cyclin D2 interacts with a rice cyclin-dependent kinase, consequently enhancing seedling growth.

Antagonism of Bacterial Extracellular Metabolites to Freshwater-Fouling Invertebrate Zebra Mussels, Dreissena polymopha

  • Gu, Ji-Dong;Ralph Mitchell
    • Journal of Microbiology
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    • 제39권2호
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    • pp.133-138
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    • 2001
  • We investigated the antagonism of indigenous bacteria isolated from stressed mussels and their extracellular metabolites on the adult zebra mussel, Dreissena polymorpha. Selective bacterial isolates including Aeromonas media, A. salmonicida, A. veronii, and Shewanella putrefaciens, showed strong lethality against adult mussels and 100% mortality was observed within 5 days of incubation. Bacterial metabolites, fractionated and concentrated from stationary-phase culture supernatants of these bacterial isolates, displayed varying degrees of antagonistic effects on zebra mussels. Among the three size fractions examined, <5, 5-10, and >10 kDa, the mast lethal fraction seems to be >10 kDa for three of the four isolates tested. Further chemical analyses of these size fractions revealed that the predominant constituents were polysaccharides and proteins. No 2-keto-3-deoxyoctanoic acid (2-KDO), deoxyribonucleic acids (DNA) or uranic acid were detectable. Extraction of supernatants of two antagonistic isolates with polar solvent suggested that polar molecules are present in the active fraction. Our data suggest that extracellular metabolites produced by antagonistic bacteria are also involved in disease development in zebra mussels and elucidation of the mechanisms involved may offer a novel strategy for control of biofouling invertebrates.

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Hydration Effect on the Intrinsic Magnetism of Natural Deoxyribonucleic Acid as Studied by EMR Spectroscopy and SQUID Measurements

  • Kwon, Young-Wan;Lee, Chang-Hoon;Do, Eui-Doo;Choi, Dong-Hoon;Jin, Jung-Il;Kang, Jun-Sung;Koh, Eui-Kwan
    • Bulletin of the Korean Chemical Society
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    • 제29권6호
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    • pp.1233-1242
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    • 2008
  • The hydration effect on the intrinsic magnetism of natural salmon double-strand DNA was explored using electron magnetic resonance (EMR) spectroscopy and superconducting quantum interference device (SQUID) magnetic measurements. We learned from this study that the magnetic properties of DNA are roughly classified into two distinct groups depending on their water content: One group is of higher water content in the range of 2.6-24 water molecules per nucleotide (wpn), where all the EMR parameters and SQUID susceptibilities are dominated by spin species experiencing quasi one-dimensional diffusive motion and are independent of the water content. The other group is of lower water content in the range of 1.4-0.5 wpn. In this group, the magnetic properties are most probably dominated by cyclotron motion of spin species along the helical π -way, which is possible when the momentum scattering time (${\tau}_k$) is long enough not only to satisfy the cyclotron resonance condition (${\omega}_c{\tau}_k$ > 1) but also to induce a constructive interference between the neighboring double helices. The same effect is reflected in the S-shaped magnetization-magnetic field strength (M-H) curves superimposed with the linear background obtained by SQUID measurements, which leads to larger susceptibilities at 1000 G when compared with the values at 10,000 G. In particular, we propose that the spin-orbital coupling and Faraday's mutual inductive effect can be utilized to interpret the dimensional crossover of spin motions from quasi 1D in the hydrate state to 3D in the dry state of dsDNA.

分子軌道論의 生物化學에의 應用 (第 2 報). 發癌物質과 DNA 鹽基와의 相互作用 (Application of Molecular Orbital Theory to Biological chemistry (II). Interactions of Chemical Carcinogens with DNA Bases)

  • 김호순;박윤열;박병각
    • 대한화학회지
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    • 제24권4호
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    • pp.280-287
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    • 1980
  • 發癌物質과 DNA 鹽基雙間의 分子錯物形成에서 可能性있는 配置(orientation)를 決定하였다. 아데닌-티민 염기쌍에서는 티민쪽에서, 구아닌-시토신 염기쌍에서는 구아닌쪽에서 分子錯物을 形成한다.

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Effects of Soybean Small Peptides on Rumen Fermentation and on Intestinal and Total Tract Digestion of Luxi Yellow Cattle

  • Wang, W.J.;Yang, W.R.;Wang, Y.;Song, E.L.;Liu, X.M.;Wan, F.C.
    • Asian-Australasian Journal of Animal Sciences
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    • 제26권1호
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    • pp.72-81
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    • 2013
  • Four Luxi beef cattle ($400{\pm}10$ kg) fitted with ruminal, duodenal and ileal cannulas were used in a $4{\times}4$ Latin square to assess the effects of soybean small peptide (SSP) infusion on rumen fermentation, diet digestion and flow of nutrient in the gastrointestinal tract. The ruminal infusion of SSP was 0 (control), 100, 200 and 300 g/d. Ruminal SSP infusion linearly (p<0.01) and quadratically (p<0.01) increased microbial protein synthesis and rumen ammonia-N concentration. Concentrations of total volatile fatty acid were linearly increased (p = 0.029) by infusion SSP. Rumen samples were obtained for analysis of microbial ecology by real-time PCR. Populations of rumen Butyrivibrio fibrisolvens, Streptococcus bovis, Ciliate protozoa, Ruminococcus flavefaciens, and Prevotella ruminicola were expressed as a proportion of total Rumen bacterial 16S ribosomal deoxyribonucleic acid (rDNA). Butyrivibrio fibrisolvens populations which related to total bacterial 16S rDNA were increased (p<0.05), while Streptococcus bovis populations were linearly (p = 0.049) and quadratically (p = 0.020) decreased by infusion of SSP. Apparent rumen digestibility of DM and NDF were (Q, p<0.05; L, p<0.05) increased with infusion SSP. Total tract digestion of DM, OM and NDF were linearly (p<0.01) and quadratically (p<0.01) increased by infusing SSP. The flow of total amino acids (AA), essential amino acids (EAA) and individual amino acids were linearly (p<0.01) and quadratically (p<0.01) increased with infusion SSP. The digestibility of Lysine was quadratically (p = 0.033) increased and apparent degradability of Arginine was linearly (p = 0.032) and quadratically (p = 0.042) increased with infusion SSP. The results indicated that infusion SSP could improve nutrient digestion, ruminal fermentation and AA availability.

Vitamin과 핵산이 Sclerotium rolfsii의 균사생장 및 균핵형성에 미치는 영향 (Effects of Vitamins and Nucleic acids on the mycelial growth and the sclerotial production of Sclerotium rolfsii)

  • 김기청
    • 한국응용곤충학회지
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    • 제12권2호
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    • pp.71-78
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    • 1973
  • 목련흰비단병균 Sclerotium rolfsii의 균사생장 및 균핵형성에 대한 thianine, biotin, nicotinic acid, Pyrido-xine, inositol과 DNA 및 RNA의 영향을 조사한 바 그 결과를 요약하면 다음과 같다. 1. 공시균은 thiamine 결핍균으로서 균사생장 최적 thiamine 농도는 20r/l이고 이농도를 초과하면 오히려 균사생장이 억제되어 150r/l에서는 무첨가구와 거이 비슷한 균사생장을 하였다. 2. 공시균의 생장에 있어서 thiamine의 첨가에 따른 질소원 이용도는 $NH_4NO_3>(NH_4)_2SO_4>asparagine>KNO_3$의 순위이며 질소원별 thiamine 최적요구량은 $KNO_3$인 경우 12r/l, asparagine인 경우는 16r/l정도였다. 균핵형성량에 있어서는 $KNO_3>NH_4NO_3>asparagine>(NH_4)_2SO_4$의 순위로 질소원별 thiamine 최적량은 $KNO_3,\;NNO_3,\;NH_4NO_3$가 8r/l에서 균핵의 대부분이 형성되나 asparagine은 16r/l정도였다. 3. 배양액의 pH는 공시균이 생장을 개시하자마자 3.5정도로 급격히 떨어지나 그 이후로는 생장량이 증가함에 따라 완만하게 떨어졌다. 그러나 pH2.2 이하로는 내려가지 않았다. 4. Nicotinic acid는 공시균의 생장 및 균핵형성에 아무런 효과가 없었다. 그러나 thiamine 10r/l와의 공존하에서는 다소의 효과가 있는 것으로 nicotinic acid 7-10mg/l에서 가장 생장이 좋았고 그 이상에서는 생육이 억제되었다. 5. Pyridoxine, biotin 및 inositol은 배지의 질소원이 $(NH_4)_2SO_4$나 asparagine인 경우 모두 공시균의 균사생장 및 균핵형성에 아무런 효과가 없었다. 6. 공시균의 균사생 장에 대한 각종 vitamin의 상호효과는 thiamine, biotin, Pyridoxine, inositol의 4가지 combination에 의해서도 thiamine이 첨가되지 않으면 거이 효과가 나타나지 않았다. 그러나 thiamine+pyridoxine, thiamine + inositol, thiamine + biotin + pyrid oxine, thiamine + biotin + pyridoxine + inositol 구에 있어서는 thiamine단독첨가구와 동등 혹은 그 이상이지만 thiamine+biotin과 thianline+biftin+inositol구는 오히려 떨어졌다. 균핵형성에 있어서는 thiamine단독구에 비하여 각구 모두 약간씩 증가하였다. 7. 공시균의 균사생장에 대한 DNA와 RNA의 효과는 무첨가구에 비하여 다소 인정되는데 DNA보다는 RNA가 좀더 효과적이었다. RNA는 2-6mg/l에서 DNA는 6mg/l에서 가장 좋았다. 균핵형성에 있어서는 효과가 없 었다. 8. RNA의 농도가 증가함에 따라 또 thiamine의 농도가 증가함에 따라 균사생장량이 증가하는 것으로 thiamine의 존재하에 RNA의 효과가 뚜렷하게 나타났다. 그러나 균핵형성에는 효과가 없었다.

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천연 DNA와 2,4-디히드록시살로펜-염화철(III)과 의 상호작용 연구 (Study of Interaction of Native DNA with Iron(III)-(2,4-Dihydroxysalophen)chloride)

  • Azani, Mohammad-Reza;Hassanpour, Azin;Bordbar, Abdol-Khalegh
    • 대한화학회지
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    • 제54권5호
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    • pp.573-578
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    • 2010
  • 본 연구에서는 염화제1철을 2,4-디히드록시살로펜과 조합하여 2,4-디히드록시살로펜-염화철을 합성하였다. 이 복합체를 자외선-가시광선 분광법, IR 분광법으로 분석하였고, 천연의 송아지 흉선 DNA (ct-DNA)와 2,4-디히드록시살로펜-염화철의 상호작용을 자외선-가시광선 분광법, 형광분광법, 열변성 분석법, 점성측정법을 이용하여 조사하였다. 분광학적 적정실험으로 밝힌 2,4-디히드록시살로펜-염화철과 ct-DNA 사이의 결합상수는 $(1.6{\pm}0.2){\times}10^3\;M^{-1}$이었다. 형광분광분석을으로 브롬화 에티디움의 DNA 결합이 2,4-디히드록시살로펜-염화철에 의하여 저해되는 것을 관찰하였다. 이 저해효과는 2,4-디히드록시살로펜-염화철의 농도에 따라 선형의 Stern-Volmer 방정식을 따른다. 열변성 실험으로 2,4-디히드록시살로펜-염화철이 DNA의 녹는점을 약 $4.3^{\circ}C$ 증가시킨다는 것을 관찰하였다. 이 결과들은 2,4-디히드록시살로펜-염화철이 대부분 ct-DNA의 큰고랑과 상호작용한다는 모델을 잘 설명하여 준다.

벼 세포적기에 미치는 염분 농도의 영향 (Effect of Salt on Mitotic Cycle in Root Meristem Cells of Rice)

  • 김재철;권성환;이진재;이영일
    • 한국작물학회지
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    • 제37권5호
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    • pp.397-404
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    • 1992
  • 본 연구는 내염성이 비교적 강한 Japonica형 품종인 섬진벼와 내염성이 비교적 약한 통일형 품종인 칠성벼를 염분농도에 따른 세포주기를 측정하고 각 phase의 기간 변화도 조사하였으며, 또한 DNA, RNA 및 단백질 합성량를 제출하여 세포주기와 어떠한 관련성이 있는지를 조사한 결과 다음과 같다. 1. 섬진벼와 칠성벼의 세포주기는 염분농도 0%, 0.3% 및 0.6%에 서 12시간으로 동일하였다. 2. 세포주기로부터 측정된 각 phase 별 기간은 무처리구와 처리구에서 차이를 보였다. 섬진벼가 무처리구에서 G1=3.3, S=3.8, G2=2.8, 그리고 M=2.1 시간이었고, 0.3%에서 G1=3.5, S=3.6, G2=2.8, 그리고 M=2.1 시간이었으며, 0,6%에서 G1=3.5, S=3.6, G2=2.8, 그리고 M=2.1 시간으로 무처리구에 비하여 G1 기간은 길어겼고, S 기간은 약간 짧아졌다. 칠성벼에서는 무처리구에서 G1=2.6, S=5.2, G2=2.3, 그리고 M=1.9 시간이었고, 0.3%에서 G1=2.5, S=6.2, G2=1.6 그리고 M=1.7 시간이었으며, 0.6%에서 G1=2.1, S=6.0, G2=2.0 그리고 M=1.9 시간으로 무처리구에 비하여 처리구의 G1과 G2 기간은 짧아졌고 S 기간은 길어졌으며, 이는 섬진벼의 변화와 반대 성향을 보여 주었다. 3. 섬진벼에서 처리구가 무처리구에 비하여 DNA와 RNA 합성은 감소한 반면, 단백질 합성은 증가하였으며, 칠성벼에서는 처리구가 무처리구에 비하여 DNA와 단백질 합성은 증가하였으나, RNA 합성은 섬진벼와 같이 감소하였다.

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