• 미생물학회지
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• 제30권3호
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• pp.207-212
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• 1992

합성세제 분해능이 월등한 Pseudomonas putida 와 프탈산에스테르를 분해하는 Arthobacter spp. 의 세포융합을 통해 합성세제와 프탈산에스테르의 분해능을 모두 갖는 융합균주를 개발하였다. Ampicillin-Lysozyme-EDTA 에 의한 각 균주의 원형진체 생성율은 98.4%-99.9% 이었고 원형질체의 재생율은 5-8%이었다. Fusogen으로 40%PEG4000 을 이용하였을 때 효과적으로 융합이 이루어졌으며 융합율은 $1.8{\times}10^{4} $-2.9{\times}10^{4}$ 이었다. 선별된 융합체는 프탈산에스테르와 ABS 를 모두 분해하였으며 ABS 의 분해능은 모균주보다 약 20% 정도 분해능이 증가하였고 DEHP 의 분해능은 모균주와 비슷한수준이었으나 모균주보다 더 빨리 기질을 분해하였다.

• 한국환경과학회:학술대회논문집
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• 한국환경과학회 2002년도 봄 학술발표대회 발표논문집
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• pp.209-212
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• 2002

본 연구는 방향족 화합물질 중 페놀폐수에 대한 생물학적 처리를 위해 본 실험실에서 분리한 페놀분해능이 우수한 Rhodococrus sp. EL-GT를 이용하여 catechol 분해 catechol 1,2-dioxygenase 분해활성을 측정하였고, 이것이 ortho-pathway임을 확인할 수 있었다. 또한 다른 연구에서 보고된 Rhodococcus rhodochrous NCIMB 13259 균주의 catechol 1,2 dioxygenase를 기초로한 primer를 이용하여 PCR을 수행하였으며 이 분해 유전자의 cloning실험을 수행 중이다. 이들 실험을 통하여 Rhodococcus sp.의 페놀분해균의 유전적 구조 및 특성을 검토하고 밝혀지는 단백질 정보를 이용하여 방향족 화합물의 분해능이 보다 우수한 균주의 개발을 시도하고자 한다.

• Journal of Microbiology and Biotechnology
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• 제29권8호
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• pp.1255-1265
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• 2019

To investigate the diversity of gastrointestinal microflora and lignocellulose-degrading enzymes in wild Asian elephants, three of these animals living in the same group were selected for study from the Wild Elephant Valley in the Xishuangbanna Nature Reserve of Yunnan Province, China. Fresh fecal samples from the three wild Asian elephants were analyzed by metagenomic sequencing to study the diversity of their gastrointestinal microbes and cellulolytic enzymes. There were a high abundance of Firmicutes and a higher abundance of hemicellulose-degrading hydrolases than cellulose-degrading hydrolases in the wild Asian elephants. Furthermore, there were a high abundance and a rich diversity of carbohydrate active enzymes (CAZymes) obtained from the gene set annotation of the three samples, with the majority of them showing low identity with the CAZy database entry. About half of the CAZymes had no species source at the phylum or genus level. These indicated that the wild Asian elephants might possess greater ability to digest hemicellulose than cellulose to provide energy, and moreover, the gastrointestinal tracts of these pachyderms might be a potential source of novel efficient lignocellulose-degrading enzymes. Therefore, the exploitation and utilization of these enzyme resources could help us to alleviate the current energy crisis and ensure food security.

• 미생물학회지
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• 제36권4호
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• pp.259-266
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• 2000

아닐린분해능이 있는 Flavimonas oryzihabitans과 4-chlorobiphenyl (4-CBP)를 분해하는 Pseudomonas sp.를 원형질체 융합하여 아닐린과 4-CBP를 모두 분해하는 융합균주를 개발하고, 융합체의 특성을 조사하였다. F. oryzibhavitans는 융합체 선별표지 위애 NTG처리하여 chloramphenicol 내성 ($Cm^r$)을 유발하였다. Lysozyme-EDTA에 의한 각 모균주의 원형질체 생성율은 약 99%이었고, 원형질체의 재생율은 5.0~6.6%이었다. 원형질체는 40% PEG 6000을 사용하였을 때 효과적으로 융합이 이루어졌으며 융합율은 $3.16{\times}10^{-4} $이었다. 융합균인 F22의 DNA양는 모균주에 비해 약 2배 정도 증가 하였으며, 생화학적 특성은 모균주의 특성이 혼합하여 나타났다. F22는 5 mM 아닐린 최소배지에서는 모균주와 성장능과 분해능이 거의 비슷하였고, 10 mM 아닐린 최소배지에서는 1.5배 빠른 성장속도를 나타내었으나, 4-CBP 분해능은 모균주보다 약간 낮게 나타났다.

• 한국지하수토양환경학회지:지하수토양환경
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• 제21권1호
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• pp.72-79
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• 2016

Bioremediation is one of the most effective ways to remediate TPH-contaminated sites. However, under actual field conditions that are not at the optimum temperature, degradation of microorganisms is generally reduced, which is why the efficiency of biodegradation is known to be significantly affected by the soil temperature. Therefore, in this study, the labscale experiment was conducted using indigenous crude oil degrading microorganisms isolated from crude oil contaminated site to evaluate the remediation efficiency. Crude oil degrading microorganisms were isolated from crude oil contaminated soil and temperature, which is a significant factor affecting the remediation efficiency of land farming, was adjusted to evaluate the microbial crude oil degrading ability, degradation time, and remediation efficiency. In order to assess the field applicability, the remediation efficiency was evaluated using crude oil contaminated soil (average TPH concentration of 10,000 mg/kg or more) from the OO premises. Followed by the application of microorganisms at 30℃, the bioremediation process reduced its initial TPH concentration of 10,812 mg/kg down to 1,890 mg/kg in 56 days, which was about an 83% remediation efficiency. By analyzing the correlation among the total number of cells, the number of effective cells, and TPH concentration, it was found that the number of effective microorganisms drastically increased during the period from 10 to 20 days while there was a sharp decrease in TPH concentration. Therefore, we confirmed the applicability of land farming with isolated microorganisms consortium to crude oil contaminated site, which is also expected to be applicable to bioremediation of other recalcitrant materials.

• Journal of the Korean Wood Science and Technology
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• 제31권4호
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• pp.71-80
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• 2003

목재의 주성분 중 가장 분해가 어려운 리그닌을 분해하는 균주를 선발하기 위해 산림지역에서 채취한 부후목과 자실체로부터 균을 분리하였다. 리그닌 분해능은 활엽수보다 미생물 분해가 어렵다고 알려진 침엽수인 소나무재에 미생물을 처리하여 Klason 리그닌 정량을 통해 조사하였다. 또한 선발균에 의한 소나무재의 분해과정과 부후정도를 주사전자현미경(Scanning Electron Microscope ; SEM)을 이용해 조사하였다. 선발 균주 중 CJ-6에서 소나무 리그닌의 분해율이 49.48%로 가장 높았으며, 이것은 리그닌 분해 우수 균주로 알려진 Trametes versicolor의 40.58%와 비교해 보았을 때 리그닌 분해력이 더 우수하였다. 균주들 중 리그닌 분해력이 좋게 나타난 2개의 균주를 대상으로 부후에 의한 목재조직의 변화를 관찰하였는데 두 균주의 부후형이 비슷한 경향을 나타내었다. 부후 20일 경과에서는 균사의 침입은 있었으나 아직 목재는 건전한 상태를 유지하고 있었으며, 60일 간의 부후에서는 부후가 어느 정도 진행되어 가도관 벽과 방사조직의 세포벽의 일부가 분해되어 있음을 알 수 있었다. 100일간 부후가 진행된 경우에는 부후가 상당히 진행되어 가도관 세포벽 안쪽이 분해가 많이 진행되어 있었으며, 방사조직의 세포벽이 많이 분해되어 있어 세포간의 구별이 어려웠다.

• 한국축산식품학회지
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• 제37권3호
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• pp.392-401
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• 2017

Variations in physical toughness between muscles and animals are a function of growth rate and extend of collagen type I and III. The current study was designed to investigate the ability of growth rate, collagen concentration, collagen synthesizing and degrading genes on two different fibroblast cells derived from Hanwoo m. longissimus dorsi (LD) and semimembranosus (SM) muscles. Fibroblast cell survival time was determined for understanding about the characteristics of proliferation rate between the two fibroblasts. We examined the collagen concentration and protein expression of collagen type I and III between the two fibroblasts. The mRNA expression of collagen synthesis and collagen degrading genes to elucidate the molecular mechanisms on toughness and tenderness through collagen production between the two fibroblast cells. From our results the growth rate, collagen content and protein expression of collagen type I and III were significantly higher in SM than LD muscle fibroblast. The mRNA expressions of collagen synthesized genes were increased whereas the collagen degrading genes were decreased in SM than LD muscle. Results from confocal microscopical investigation showed increased fluorescence of collagen type I and III appearing stronger in SM than LD muscle fibroblast. These results implied that the locomotion muscle had higher fibroblast growth rate, leads to produce more collagen, and cause tougher than positional muscle. This in vitro study mirrored that background toughness of various muscles in live animal is likely associated with fibroblast growth pattern, collagen synthesis and its gene expression.

• Journal of Microbiology
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• 제42권2호
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• pp.87-93
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• 2004

Twelve mecoprop-degrading bacteria were isolated from soil samples, and their genetic and phenotypic characteristics were investigated. Analysis of 16S rDNA sequences indicated that the isolates were related to members of the genus Sphingomonas. Ten different chromosomal DNA patterns were obtained by polymerase-chain-reaction (PCR) amplification of repetitive extragenic palindromic (REP) sequences from the 12 isolates. The isolates were found to be able to utilize the chiral herbicide meco-prop as a sole source of carbon and energy. While seven of the isolates were able to degrade both (R)-and (S)-mecoprop, four isolates exhibited enantioselective degradation of the (S)-type and one isolate could degrade only the (R)-enantiomer. All of the isolates were observed to possess plasmid DNAs. When certain plasmids were removed from isolates MPll, MP15, and MP23, those strains could no longer degrade mecoprop. This compelling result suggests that plasmid DNAs, in this case, conferred the ability to degrade the herbicide. The isolates MP13, MP15, and MP24 were identified as the same strain; however, they exhibited different plasmid profiles. This indicates that these isolates acquired dif-ferent mecoprop-degradative plasmids in different soils through natural gene transfer.

• Mycobiology
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• 제37권1호
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• pp.53-61
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• 2009

The process of biodegradation in lingo-cellulosic materials is critically relevant to biospheric carbon. The study of this natural process has largely involved laboratory investigations, focused primarily on the biodegradation and recycling of agricultural by-products, generally using basidiomycetes species. In order to collect super white rot fungi and evaluate its ability to degrade lingo-cellulosic material, 35 fungal strains, collected from forests, humus soil, livestock manure, and dead trees, were screened for enzyme activities and their potential to decolorize the commercially used Poly-R 478 dye. In the laccase enzymatic analysis chemical test, 33 white rot fungi and 2 brown rot fungi were identified. The degradation ability of polycyclic aromatic hydrocarbons (PAHs) according to the utilized environmental conditions was higher in the mushrooms grown in dead trees and fallen leaves than in the mushrooms grown in humus soil and livestock manure. Using Poly-R 478 dye to assess the PAH-degradation activity of the identified strains, four strains, including Agrocybe pediades, were selected. The activities of laccase, MnP, and Lip of the four strains with PAH-degrading ability were highest in Pleurotus incarnates. 87 fungal strains, collected from forests, humus soil, livestock manure, and dead trees, were screened for enzyme activities and their potential to decolorize the commercially used Poly-R 478 dye on solid media. Using Poly-R 478 dye to assess the PAHdegrading activity of the identified strains, it was determined that MKACC 51632 and 52492 strains evidenced superior activity in static and shaken liquid cultures. Subsequent screening on plates containing the polymeric dye poly R-478, the decolorization of which is correlated with lignin degradation, resulted in the selection of a strain of Coriolus versicolor, MKACC52492, for further study, primarily due to its rapid growth rate and profound ability to decolorize poly R-478 on solid media. Considering our findings using Poly-R 478 dye to evaluate the PAH-degrading activity of the identified strains, Coriolus versicolor, MKACC 52492 was selected as a favorable strain. Coriolus versicolor, which was collected from Mt. Yeogi in Suwon, was studied for the production of the lignin-modifying enzymes laccase, manganese-dependent peroxidase (MnP), and lignin peroxidase (LiP).

• 한국생물공학회:학술대회논문집
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• 한국생물공학회 2002년도 생물공학의 동향 (X)
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• pp.371-374
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• 2002

염색폐수 중에 포함된 PVA를 생물학적으로 제거하기 위하여 PVA 분해용 미생물 50종을 분리하였다. 분리된 균주의 PVA 분해효율을 살펴보기 위하여 단일균주만을 이용한 실험과 단일균주들의 조합을 사용하여 실험을 진행하였는데, 단일균주를 사용했을 때는 최대 60%, 조합을 사용했을 때는 최대 96%의 분해율을 얻을 수 있었으며 3일 이내에 80% 이상을 분해하였는데, 이러한 결과는 지금까지 발표된 연구에서 보고된 PVA 분해기간 중 가장 빠른 결과이다.