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Genomic Polymorphism Analysis Using Microsatellites in the Jeju Dogs (제주개의 microsatellite 마커를 이용한 유전적 다양성 분석)

  • Ko, Minjeong;Kwon, Seulgi;Kim, Hye-Ran;Byun, Jae-Hyun;Kim, Dae-Cheol;Choi, Bong-Hwan
    • Journal of Life Science
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    • v.29 no.6
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    • pp.637-644
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    • 2019
  • This study was conducted to analyze the genetic characteristics of the Jeju dog for preservation and protection. A total of 139 dogs from 7 dog breeds, including the Jeju dog, were genotyped using 16 microsatellite markers. The results revealed 2-18 alleles per locus, with a total of 131 alleles among the 16 markers. Most alleles were identified for FH3381, which had 18 alleles, whereas FH2834 had the fewest alleles, with just 2. When the total mean value was observed, the expected heterozygosity and observed heterozygosity were higher for than for outgroup dogs, and the PIC values ranged from 0.000 to 0.862, respectively. The phylogenetic tree analysis of the Jeju dog and other dog varieties revealed that the Jeju dog is closest to the Sapsal dog (0.393). The phylogeny between the Jeju and Korean domestic dogs showed that the Jeju dog is most distant from the Dongkyung dog (0.507). Looking at the distribution individually, the Jeju dog is in the same group as the Labrador Retriever and the Sapsal dog. Meanwhile, the Poongsan, Dongkyung, and Jindo dogs and the German Shepherd were in the same group. Genetic information confirmed through the results of this study can be used as basic data to study the genetic characteristics of the Jeju dog.

Prediction of the Optimal Growth Site and Estimation of Carbon Stocks for Quercus acuta in Wando Area (완도지역의 붉가시나무 생육 적지예측 및 탄소저장량 추정)

  • Hwang, Jeong-Sun;Kang, Jin-Teak;Son, Yeong-Mo;Jeon, Hyun-Sun
    • Journal of Climate Change Research
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    • v.6 no.4
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    • pp.319-330
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    • 2015
  • This study was carried out to predict the optimal growth site and estimate carbon stocks of Quercus acuta, evergreen broad-leaved trees in warm temperate zone according to climate change. The criterion for the optimal site prediction was created by quantification method with quantitative and qualitative data, collected from growth factors of stands and environmental factors of survey sites of 42 plots in Q. acuta by study relationship between growth of tree and site environmental factors. A program for the optimal site prediction was developed by using GIS engine tools. To prediction of the suitable growth site of Quercus acuta, developed program in this study applied to Wando in Jeollanam-do, distributing a various evergreen bread-leaved trees of warm temperate zone. In the results from analysis of the optimal site prediction on Q. acuta, the characteristics of the optimal site showed as follows; site environmental features of class I (the best site class for Q. acuta) was defined as 401 ~ 500 m of altitude, $21{\sim}25^{\circ}$ of slope with above hillside, residual of deposit convex of slope type with west of aspect. The area and carbon stocks of optimal site prediction by class for Q. acuta in classI showed 147.1 ha (2.5%), total 316.5 tC/ha, total $1,161tCO_2/ha/yr$ of class I, 2,703.5 ha (46.3%), total 5,817.4 tC/ha, total $21,331tCO_2/ha/yr$ of class II, 2,845.5 ha (48.6%), total 6,123.0 tC/ha, total $2,845.5tCO_2/ha/yr$ of class III and 153.7 ha (2.6%), total 330.7 tC/ha, total $1,213.7tCO_2/ha/yr$ of class IV.

Effects of Open-field Artificial Warming and Precipitation Manipulation on Physiological Characteristics and Growth of Pinus densiflora Seedlings (실외 인위적 온난화 및 강수 조절이 소나무 묘목의 생리적 특성과 생장에 미치는 영향)

  • Park, Min Ji;Yun, Soon Jin;Yun, Hyeon Min;Chang, Hanna;Han, Seung Hyun;An, Jiae;Son, Yowhan
    • Journal of Climate Change Research
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    • v.7 no.1
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    • pp.9-17
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    • 2016
  • Climate change affects plant responses on physiological characteristics and growth, and Pinus densiflora, one of the major tree species in Korea, are expected to be particularly vulnerable to rising temperature and increased precipitation. This study was conducted to investigate the effects of an open-field warming and precipitation manipulation on physiological characteristics and growth of P. densiflora seedlings. Seedlings of 2-year-old P. densiflora were planted in April, 2013, in open-field nursery located at Korea University. The air temperature of warmed plots had been set to be $3^{\circ}C$ higher than the control plots using infrared lamps. Precipitation was manipulated to be 30% lower or higher than the control, using transparent panels and drip irrigation. Net photosynthetic rate, total chlorophyll content, seedling height, root collar diameter and biomass were measured from April, 2014 to April, 2015. The increase in new shoot biomass from warming was statistically significant, with the biomass in warmed plots about 2-fold higher than in the control plots in 2014 and 2015. This result might be related to advanced bud burst and increased occurrence of abnormal new shoots in warmed plots. Meanwhile, the results of net photosynthetic rate, total chlorophyll content, seedling height, root collar diameter and total biomass from warming and precipitation manipulation were not statistically significant, but tendencies of lower net photosynthetic rate and higher seedling height and biomass in warmed plots compared to the control were shown. Such might be speculated as results of the extended growth period. When root to shoot (R/S) ratio was calculated from the biomass data obtained in April 2014 and April 2015, increased R/S ratio was observed regardless of the treatments applied. Drought tolerance of P. densiflora and particularly low annual precipitation observed in 2014 were suggested as the possible reasons.

Analysis of Genetic Characteristic of Jujube (Ziziphus jujuba Mill.) Cultivated in Korea Revealed by ISSR Markers (ISSR 표지를 이용한 국내 재배 대추나무의 유전특성 분석)

  • Nam, Jae-Ik;Lee, Uk;Kim, Sea-Hyun
    • Journal of Korean Society of Forest Science
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    • v.107 no.4
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    • pp.378-384
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    • 2018
  • Chinese jujube (Ziziphus jujuba Mill.), a member of family Rhamnaceae, is an economically important species. It has high nutritional value in fruits, and its medicinal properties have led to extensive use in traditional oriental medicine. In this study, we investigated the genetic characteristics of 270 jujube germplasms collected from the six major jujube fruit production areas in Korea including Boeun and Gyeongsan, in order to understand the current situation on cultivated varieties of domestic jujube and to obtain useful data for selection of superior germplasms and establishing their breeding plans. The results of ISSR marker analysis revealed that the Shannon's information index of the 270 germplasms was 0.107 and the genetic similarity was as high as 0.935 showing the dominance of a specific cultivar or germplasm, and almost 67% (180) of them were identified at the same genotype with 'Bokjo'. The domestic commercial jujube populations could be characterized by very low genetic diversity and thus may be vulnerable to external disturbances. In addition, it seems that most of the jujube fruits in domestic market were largely produced through parthenocarpy.

Predicting Corporate Bankruptcy using Simulated Annealing-based Random Fores (시뮬레이티드 어니일링 기반의 랜덤 포레스트를 이용한 기업부도예측)

  • Park, Hoyeon;Kim, Kyoung-jae
    • Journal of Intelligence and Information Systems
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    • v.24 no.4
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    • pp.155-170
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    • 2018
  • Predicting a company's financial bankruptcy is traditionally one of the most crucial forecasting problems in business analytics. In previous studies, prediction models have been proposed by applying or combining statistical and machine learning-based techniques. In this paper, we propose a novel intelligent prediction model based on the simulated annealing which is one of the well-known optimization techniques. The simulated annealing is known to have comparable optimization performance to the genetic algorithms. Nevertheless, since there has been little research on the prediction and classification of business decision-making problems using the simulated annealing, it is meaningful to confirm the usefulness of the proposed model in business analytics. In this study, we use the combined model of simulated annealing and machine learning to select the input features of the bankruptcy prediction model. Typical types of combining optimization and machine learning techniques are feature selection, feature weighting, and instance selection. This study proposes a combining model for feature selection, which has been studied the most. In order to confirm the superiority of the proposed model in this study, we apply the real-world financial data of the Korean companies and analyze the results. The results show that the predictive accuracy of the proposed model is better than that of the naïve model. Notably, the performance is significantly improved as compared with the traditional decision tree, random forests, artificial neural network, SVM, and logistic regression analysis.

Estimating Stem Volume Table of Quercus Acutissima in South Korea using Variable Exponent Equation (변량지수식을 이용한 전국 상수리나무의 입목수간재적표 추정)

  • Ko, Chi-Ung;Kim, Dong-Geun;Kang, Jin-Taek
    • Journal of Korean Society of Forest Science
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    • v.108 no.3
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    • pp.357-363
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    • 2019
  • This study was conducted to develop a stem volume table for Quercus acutissima in Korea by using Kozak's stem taper equation. In total, 2700 tree samples were collected around the country, and growth performance was investigated through compiling data on diameters by stem height and stem analysis. In order to test the stem taper equation's fitness, the fitness index (FI), bias, and mean absolute deviation (MAD) were analyzed. The fitness of the equation was estimated at 97%, bias as 0.017, and MAD turned out to be 1.118, respectively. Furthermore, there was a statistically significant volume difference between the current volume table and the new volume table (p = 0.0008, <0.005). The result indicates that using the new volume table that reflects the actual forest will reduce the loss when assessing wood resources and will improve the accuracy of forest statistics for national and local governments. A stem volume table, the main result of this research, which is utilized in the estimated stem taper equation, will provide growth information for Quercus acutissima, one of the main broadleaf species in Korea, and will function as a management indicator for rational forest management.

A Comparison of Wooden Coffins from Burial Mounds of Korea and Japan (한일 고분출토 목관의 비교)

  • Kang, Dong Seok
    • Korean Journal of Heritage: History & Science
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    • v.39
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    • pp.5-38
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    • 2006
  • Although in Korea there are only three examples of wooden coffins being found in burial mounds - from the Daho-ri, Songhyun-dong, and Munyung tombs, in Japan data on the shape and structure of wooden coffins from the Gofun era is relatively abundant. The wooden coffins of the Gofun era of Japan can be classified into either the dugout log style or the combined boards style according to their method of manufacture. They can also be divided by shape, into such categories as the boat shape, the split bamboo shape, the box shape, and so on. The box shape category can be further divided into the assembled type and the nailed type, according to how the boards are put together. Japanese Umbrella Pine (Sciadopitys verticillata) was favored as coffin-wood in all ages, but during the later Gofun era easily obtained woods such as the Japanese cedar (Cryptomeria japonica) or the Hinoki Falsecypress (Chamaecyparis obtusa) were also used. The coffins found at Daho-ri and Songhyun-dong are similar to the Japanese dugout log style in shape and manufacture, while the king's and queen's coffins excavated at Munyung Tomb are seen to have had direct influence on the appearance of nailed coffins Japan. The coffin in Songhyun-dong 7th mound was originally a dugout log boat. It was probably used for practical reasons such as the bugproof, anti-corrosion qualities of camphor wood, not because of ideological reasons such as in a boat burial (in which the boat takes the deceased to the after world). Because the Changnyong region is inland, where camphor trees do not grow, using an already existing boat may have been the only way to procure a camphor-wood coffin. From historical circumstances, it may be inferred that the camphor trees were imported into Korea from Japan, between which there was much cultural exchange.

Cost-Utility Analysis of Pegfilgrastim and Pegteograstim in Patients with Breast Cancer using Doxorubicin and Cyclophosphamide (Doxorubicin과 Cyclophosphamide를 투여받는 유방암 환자에서 Pegfilgrastim과 Pegteograstim의 비용-효용 분석)

  • Kwon, Su Ji;Geum, Min Jung;Kim, Jae Song;Son, Eun Sun;Kwon, Kyeng Hee
    • Journal of Korean Society of Health-System Pharmacists
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    • v.35 no.4
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    • pp.409-417
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    • 2018
  • Background : Febrile neutropenia (FN) is one of the side effects in the patients treated with chemotherapy, and the patients who have FN generally need immediate treatment with extended-spectrum antibiotics and hospitalization. Pegfilgrastim and pegteograstim, which are used for the prevention of FN as a granulocyte-colony stimulating factor (G-CSF), have been granted insurance coverage in the Republic of Korea for certain breast cancer patients using doxorubicin and cyclophosphamide (AC) from September 2016. Methods : The data of the patients with breast cancer using AC regimen and G-CSF were collected retrospectively. This study involves cost-utility analysis of pegfilgrastim and pegteograstim. In this study, we constructed a simple decision tree model for short-term observation and calculated quality-adjusted life year (QALY) and the direct medical costs from the medical provider's perspective. Results : From September 2016 to May 2017, 15 patients were treated with pegfilgrastim and 15 patients were treated with pegteograstim. As a result of dividing the average cost by QALY for each treatment group, it was observed that pegfilgrastim and pegteograstim were consumed 24,923,384 won and 22,808,336 won per 1QALY, respectively. Consequently, incremental cost effectiveness ratio (ICER) showed 2,115,048 won more per pegfilgrastim than pegteograstim per 1QALY, and the cost per 1QALY of both the drugs was lower than 30,500,000 won; the Koreans were willing to pay this amount. Conclusions : This study suggests that pegfilgrastim and pegteograstim can be used to improve the quality of life of breast cancer patients undergoing AC therapy. Among the two drugs, pegteograstim seems to be more cost-effective. However, since this study was conducted as a retrospective observation method on a small scale, it is associated with many limitations. Therefore, a long-term prospective cohort study is needed to supplement the present findings.

Vegetation Structure and Distribution characteristics of Forest Community along Elevation on Mt. Hallasan (제주도 남동사면의 산림식생구조와 해발고별 산림군집 및 개체군 분포 특성)

  • Lee, Jeong Eun;Yun, Chung Weon
    • Journal of Korean Society of Forest Science
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    • v.110 no.2
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    • pp.141-154
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    • 2021
  • The change in vegetation structure along elevational gradients on the southeastern part of Mt. Hallasan was studied. Vegetation data were collected with 59 quadrates located from 16 to 1,565 m with 100 m intervals. Community types were classified using cluster analysis, and species composition and diversity were analyzed along elevational gradients. The vegetation was classified into seven, namely, type 1 Quercus serrata community, type 2 Carpinus tschonoskii community, type 3 Carpinus laxiflora community, type 4 Pinus densiflora community, type 5 Abies koreana community, type 6 Castanopsis sieboldii community, and type 7 Quercus acuta community. The species with a high importance value in tree layer in each elevational zone were C. sieboldii and Q. acuta at 100-600 m; C. laxiflora, Q. serrata, and C. tschonoskii at 700-800 m; P. densiflora at 1,100-1,200 m; and Abies koreana at 1,500-1,600 m. The species diversity indicated higher value at 700-800 m, 1,200-1,300 m and 1,400-1,500 m than at the other elevation.

Vegetation structure and distribution characteristics of Symplocos prunifolia, a rare evergreen broad-leaved tree in Korea

  • Kim, Yangji;Song, Kukman;Yim, Eunyoung;Seo, Yeonok;Choi, Hyungsoon;Choi, Byoungki
    • Journal of Ecology and Environment
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    • v.44 no.4
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    • pp.275-285
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    • 2020
  • Background: In Korea, Symplocos prunifolia Siebold. & Zucc. is only found on Jeju Island. Conservation of the species is difficult because little is known about its distribution and natural habitat. The lack of research and survey data on the characteristics of native vegetation and distribution of this species means that there is insufficient information to guide the management and conservation of this species and related vegetation. Therefore, this study aims to identify the distribution and vegetation associated with S. prunifolia. Results: As a result of field investigations, it was confirmed that the native S. prunifolia communities were distributed in 4 areas located on the southern side of Mt. Halla and within the evergreen broad-leaved forest zones. Furthermore, these evergreen broad-leaved forest zones are themselves located in the warm temperate zone which are distributed along the valley sides at elevations between 318 and 461 m. S. prunifolia was only found on the south side of Mt. Halla, and mainly on south-facing slopes; however, small communities were found to be growing on northwest-facing slopes. It has been confirmed that S. prunifolia trees are rare but an important constituent species in the evergreen broad-leaved forest of Jeju. The mean importance percentage of S. prunifolia community was 48.84 for Castanopsis sieboldii, 17.79 for Quercus acuta, and 12.12 for Pinus thunbergii; S. prunifolia was the ninth most important species (2.6). Conclusions: S. prunifolia can be found growing along the natural streams of Jeju, where there is little anthropogenic influence and where the streams have caused soil disturbance through natural processes of erosion and deposition of sediments. Currently, the native area of S. prunifolia is about 3300 ㎡, which contains a confirmed population of 180 individual plants. As a result of these low population sizes, it places it in the category of an extremely endangered plant in Korea. In some native sites, the canopy of evergreen broad-leaved forest formed, but the frequency and coverage of species were not high. Negative factors that contributed to the low distribution of this species were factors such as lacking in shade tolerance, low fruiting rates, small native areas, and special habitats as well as requiring adequate stream disturbance. Presently, due to changes in climate, it is unclear whether this species will see an increase in its population and habitat area or whether it will remain as an endangered species within Korea. What is clear, however, is that the preservation of the present native habitats and population is extremely important if the population is to be maintained and expanded. It is also meaningful in terms of the stable conservation of biodiversity in Korea. Therefore, based on the results of this study, it is judged that a systematic evaluation for the preservation and conservation of the habitat and vegetation management method of S. prunifolia should be conducted.