• Korean Journal of Plant Taxonomy
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• v.44 no.2
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• pp.111-118
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• 2014

This study aims to define the phylogenetic relationship within Korean Pinus L. and to find the molecular markers which resolve the phylogenetic relationship in genus Pinus. cpDNA atpF-H and psbA-trnH regions were used as molecular markers. We performed the molecular phylogenetic study on 17 taxa of Pinus in Korea. The combined analyses of two gene loci showed that Korean Pinus was a monophyletic group supported by 100% BP. According to the results of separate analyses, psbA-trnH region seems to work better resolving power to clarify the phylogenetic ambiguity in Korean Pinus than those of atpF-H region. Also, we tried to checked the value and resolution of two chloroplast DNA loci on phylogenetic implications.

• Korean Journal of Plant Taxonomy
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• v.40 no.4
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• pp.267-273
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• 2010

The distribution of three typical warm-temperate evergreen trees, Quercus acuta Thunb., Neolitsea sericea (Blume) Koidz., and Machilus thunbergii Siebold & Zucc., were surveyed on the Korean Peninsula based on field and specimen investigations and the distribution maps of the three species were prepared. The distribution patterns of the species correspond to the south coast floristic region in Korea, which includes the distributional areas of Jeju-do, Isl. Ulleung, the southern coastal areas, and the areas up to the islands around Incheon in the Yellow Sea. The northernmost limit of the distribution of Quercus acuta is Isl. Nap of Incheon in the west, and a new distribution was found at Isl. Ulleung in the East Sea; additionally, the limit of Neolitsea sericea is the Deojoek archipelago of Incheon. The northernmost limit of Machilus thunbergii is Isl. Daecheong of Incheon, which is the highest latitude among those of the three species. This distribution survey of evergreen broad-leaved trees in Korea can be used as basic data for the delimitation of floristic regions and as a bio-indicator of climatic change.

• Korean Journal of Plant Taxonomy
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• v.38 no.4
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• pp.345-358
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• 2008

The systematic position of Cymopterus melanotiligia (H. Boissieu) C. Y. Yoon in Apiaceae was revaluated based on the ITS sequence data. Its diagnostic characteristics include its asymmerty mericarps, 3-4 mericarp ribs, winged dorsal ribs, and ternate leaves. It is morphologically similar to Tilingia tsusimensis and Pimpinella having ternate leaves. It is distinguished from Ostericum having symmerty mericarps, 5 mericarp ribs, and rounded dorsal ribs. Also it looks like Angelica with broadly winged lateral ribs and strongly dorsally compressed mericarps, but is distinguished by having its conspicuous calyx teeth and unilayer pericarps. Cymopterus melanotiligia formed a different clade group with Cymopterus species distributed in North America based on ITS sequences, and it supports the close relationships with Halosciastrum melanotilingia. Thus, we conclude that this species is here referred to Halosciastrum melanotilingia (H. Boissieu) Pimenov & Tikhomirov.

• Korean Journal of Plant Taxonomy
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• v.45 no.2
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• pp.178-182
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• 2015

Stellaria sessiliflora Y. Yabe (Caryophyllaceae), which is known to be distributed throughout Japan excluding Okinawa, was recently found on Jeju Island in Korea. Reports on the Japanese flora state that this species is distributed on Jeju Island, and a photograph of one specimen (Slide No. 6294) collected from Jeju Island by Ohwi in May 1935 confirms this. Additionally, specimens at the National Arboretum and Korea Forest Research Institute indicate that S. sessiliflora has occurred on Jeju Island for a considerable amount of time. However, the species has never been officially listed in the flora of Korea. Stellaria sessiliflora is distinguished from S. media by having broader leaves with a slightly undulate margin, petiolate leaves on the upper part of the stem, and 10 stamens. The local name 'Geu-Neul-Byeol-Kkot' is given to the species based on its shady habitat under deciduous broadleaf forest. Details of the morphological characters, an illustration, the type specimen, voucher specimen data, and photographs of Stellaria sessiliflora in Korea are presented.

• Archives of Pharmacal Research
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• v.19 no.2
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• pp.153-159
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• 1996

A new streptothricin family antibiotic producing Streptomyces spp. SNUS 8810-111 was isolated from a soil sample. Study of its morphological and physiological characters indicated that the antibiotic producing organism was a Streptomyces spp. Taxonomical studies suggested that the organism might belong to the genus streptomyces gougeroti. The organism produced antibiotics most in calcium carbonate-tryptic soy broth. The active principles were recovered from the broth with a cation exchange resin and eluted from the resin with HCI. Cellulose column chromatography gave two active principles.$^1H-^1H$ Homo-COSY study on the first compound revealed four structural components. Total hydrolysis of the antibiotic with HCI allowed isolation of $\beta-lysine$. From these data the antibiotic was found to be streptothricin D. The other compound showed one additional signal in the .$^1H$NMR and the $^{13}C$ NMR spectra. The signal was from a methyl group attached to a nitrogen atom. Comparison of the NMR signals with those of streptothricin D suggested that the compound was N-methyl-streptothricin D which was a new compound in the family of streptothricin antibiotics.

• Journal of Microbiology and Biotechnology
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• v.17 no.5
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• pp.705-711
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• 2007

Two novel strains of the Cytophaga-Flexibacter-Bacteroides(CFB) group, designated Gsoil $219^T$ and Gsoil $238^T$, were isolated from soil of a ginseng field of Pocheon Province in Korea. Both strains were Gram-negative, aerobic, nonmotile, nonspore-forming, and rod-shaped. Phylogenetic analysis based on 16S rRNA gene sequences indicated that both isolates belong to the genus Chitinophaga but were clearly separated from established species of this genus. The sequence similarities between strain Gsoil $219^T$ and type strains of the established species and between strain Gsoil $238^T$ and type strains of the established species ranged from 91.4 to 94.7% and 91.6 to 94.2%, respectively. Phenotypic and chemotaxonomic data(major menaquinone, MK-7; major fatty acids, $iso-C_{15:0}\;and\;C_{16:1}\omega5c$; major hydroxy fatty acid, $iso-C_{17:0}3-OH$; major polyamine, homospermidine) supported the affiliation of both strains Gsoil $219^T$ and Gsoil $238^T$ to the genus Chitinophaga. Furthermore, the results of physiological and biochemical tests allowed genotypic and phenotypic differentiation of both strains from the other validated Chitinophaga species. Therefore, the two isolates represent two novel species, for which the name Chitinophaga soli sp. nov.(type strain, Gsoil $219^T=KCTC\;12650^T=DSM\;18093^T$) and Chitinophaga terrae sp. nov.(type strain, Gsoil $238^T=KCTC\;12651^T=DSM\;18078^T$) are proposed.

• Mycobiology
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• v.45 no.4
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• pp.255-262
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• 2017

A total of 121 species of lichens belonging to the genus Arthothelium have been described to date, most of which have been found in tropical regions. Here, we describe the discovery of a novel Arthothelium species for the first time in South Korea. Until now, Arthothelium ruanum was the only Arthothelium species reported in South Korea. Among the 113 specimens collected in this study, we identified A. ruanum and a putative new species, Arthothelium punctatum (J. S. Park & J.-S. Hur, sp. nov.). The diagnostic characters of A. punctatum are as follows: apothecia punctate, shortly elongate to branched, small, 0.1-0.2 mm wide, hypothecium hyaline to pale brown and obovate to broadly ellipsoid, muriform ascospores, $29.5-44.6{\times}12.2-18.2{\mu}m$. The new species was found in Mt. Seokbyeong at an altitude of 790 m on smooth bark. Upon phylogenic analysis, the putative new species, A. punctatum, was separated from other Arthothelium species although the specimens analyzed were clustered with Arthoniaceae in phylogenetic trees based on both the mitochondrial small subunit (mtSSU) sequence and combined mtSSU and nuclear ribosomal large subunit sequences. Our data clearly indicate that this species is a new species belonging to the family Arthoniaceae. To elucidate the taxonomic characteristics of the new species, we provide morphological descriptions and a distribution map.

• The Plant Pathology Journal
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• v.32 no.5
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• pp.388-395
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• 2016

The most serious aerial disease of garlic is leaf blight caused by Stemphylium spp. Geographical variation in the causal agent of this disease is indicated. Stemphylium vesicarium has been reported in Spain, whereas S. solani is the most prevalent species recorded in China. In this study, Stemphylium isolates were obtained from symptomatic garlic plants sampled from the main Spanish production areas. Sequence data for the ITS1-5.8S-ITS2 region enabled assignation of the isolates to the Pleospora herbarum complex and clearly distinguished the isolates from S. solani. Conidial morphology of the isolates corresponded to that of S. vesicarium and clearly discriminated them from S. alfalfae and S. herbarum on the basis of the size and septation pattern of mature conidia. Conidial morphology as well as conidial length, width and length:width ratio also allowed the Spanish isolates to be distinguished from S. botryosum and S. herbarum. Control of leaf blight of garlic is not well established. Few studies are available regarding the effectiveness of chemical treatments to reduce Stemphylium spp. incidence on garlic. The effectiveness of nine fungicides of different chemical groups to reduce Stemphylium mycelial growth in vitro was tested. Boscalid + pyraclostrobin (group name, succinate dehydrogenase inhibitors + quinone outside inhibitors), iprodione (dicar-boximide), and prochloraz (demethylation inhibitors) were highly effective at reducing mycelial growth in S. vesicarium with $EC_{50}$ values less than 5 ppm. In general, the effectiveness of the fungicide was enhanced with increasing dosage.

• The Korean Journal of Soil Zoology
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• v.7 no.1_2
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• pp.7-16
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• 2002

This study was based on 8 species as follows. Specimens had been collected from 8 localities in Korea from April to September, 2002: Echinozercon orientalis Blaszak, 1975 Eurozercon pacificus Halaskova, 1979 Kaikiozercon mamillosus Halaskova, 1979 Kaikiozercon peregrinus Halaskova, 1979 Koreozercon bacatus Halaskova, 1979 Mesozercon coreanus Blaszak, 1975 Mesozercon plumatus (Aoki, 1966) Zercon szeptyckii Blaszak, 1976 The size of idiosoma and the length of setae on proscrotum and postscrotum were compared with the data of North Korean specimens . Two species (E. orientalis, Z. szeptyckii) are similar, three species (E. orientalis, K. bacatus, M. coreanus) are small but not much different and the rest three species (K. mamillosus, K. peregrinus, M. plumatus) are small and much different in measurements of setae from those of the North Korean specimens.

• Parasites, Hosts and Diseases
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• v.58 no.4
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• pp.343-371
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• 2020

Echinostoma flukes armed with 37 collar spines on their head collar are called as 37-collar-spined Echinostoma spp. (group) or 'Echinostoma revolutum group'. At least 56 nominal species have been described in this group. However, many of them were morphologically close to and difficult to distinguish from the other, thus synonymized with the others. However, some of the synonymies were disagreed by other researchers, and taxonomic debates have been continued. Fortunately, recent development of molecular techniques, in particular, sequencing of the mitochondrial (nad1 and cox1) and nuclear genes (ITS region; ITS1-5.8S-ITS2), has enabled us to obtain highly useful data on phylogenetic relationships of these 37-collar-spined Echinostoma spp. Thus, 16 different species are currently acknowledged to be valid worldwide, which include E. revolutum, E. bolschewense, E. caproni, E. cinetorchis, E. deserticum, E. lindoense, E. luisreyi, E. mekongi, E. miyagawai, E. nasincovae, E. novaezealandense, E. paraensei, E. paraulum, E. robustum, E. trivolvis, and Echinostoma sp. IG of Georgieva et al., 2013. The validity of the other 10 species is retained until further evaluation, including molecular analyses; E. acuticauda, E. barbosai, E. chloephagae, E. echinatum, E. jurini, E. nudicaudatum, E. parvocirrus, E. pinnicaudatum, E. ralli, and E. rodriguesi. In this review, the history of discovery and taxonomic debates on these 26 valid or validity-retained species are briefly reviewed.