• Journal of Marine Life Science
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• v.5 no.2
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• pp.99-106
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• 2020

To investigate effect of variation in physiochemical conditions due to river discharge on phytoplankton, field surveys were conducted in the Seomjin and Yeongsan River estuaries from April to November 2016. The concentrations of DIN and DSi in Seomjin River estuary were gradually low as distance from upstream. On the other hands, the concentrations of DIN and DSi in Yeongsan River estuary were critically high at upstream, due to which is characterized as semi-enclosed eutrophic area. A total of 12 phytoplankton pigments were analyzed, and the distribution of each taxa was investigated using indicator for each phytoplankton taxa. Fucoxanthin, an indicator pigment of diatoms, showed an average of 0.61±1.00 ㎍ l^-1 and 0.76±1.22 ㎍ l^-1 in the Seomjin and Yeongsan River estuaries, respectively. Concentration of fucoxanthin was more than twice that of other pigments except chlorophyll a., indicating that diatoms were dominant taxa. Peridinin, an indicator pigment of dinoflagellate, showed some similar tendency to the microscopic observation, but mismatch results were also present, indicating a technical limitation of pigment analysis. Chlorophyll b, alloxanthin, and zeaxanthin, which are indicator pigments of green algae, cryptomonads, and cyanobacteria, were detected in both estuaries even though those taxa were not detected in microscopic observation. This indicates that the two estuaries were affected by freshwater species. Here, we can suggest that phytoplankton composition in estuary was directly influenced by the inflow from upstream. In particular, the phytoplankton population dynamics in Yeongsan River estuary was greatly associated with a large-scale artificial dyke, especially in summer rainy season. On the other hands, the seasonal and horizontal distribution of phytoplankton in Seomjin River estuary has changed along the salinity gradients and inflow-related changes.

• Korean Journal of Environment and Ecology
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• v.32 no.6
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• pp.618-638
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• 2018

This study examined the vegetation structure in the ridge of the Hannamgeumbuk-Jeongmaek and Geumbuk-Jeongmaek by selecting 7 sites(2 sites at Hannamgeumbuk-Jeongmaek and 5 sites at Geumbuk-Jeongmaek) in consideration of the environmental conditions and artificial influences and conducting the vegetation survey in the selected sites. The community classification based on TWINSPAN categorized the vegetation at Hannamgeumbuk-Jeongmaek into 8 groups: Quercus variabilis-Q. acutissima community, Pinus densiflora-Q. mongolica community, Pinus densiflora community, P. densiflora-Q. mongolica-Q. variabilis community, P. densiflora-Deciduous oaks community, P. koraiensis community, Q. mongolica-Q. variabilis community, and Larix kaempferi-P. koraiensis community. It also categorized the vegetation at Geumbuk-Jeongmaek into 9 groups: Quercus variabilis community, Deciduous broad-leaved community, Q. mongolica community, Pinus densiflora-Q. mongolica-Q. variabilis community, Q. acutissima community, P. densiflora-Q. acutissima-Q. variabilis community, P. densiflora-Q. mongolica-P. rigida community, P. densiflora-P. thunbergii-Deciduous oaks community, and P. koraiensis community. Two species, Quercus mongolica and Pinus densiflora, which are widely distributed in the ridges of the Jeongmaeks and Baekdudaegan in South Korea, were dominant in many of the surveyed sites. The appearance of planted Castanea crenata in some plots, although not in high population, suggests human intervention in most regions of the Hannamgeumbuk-Jeongmaek and Geumbuk-Jeongmaek in the past. The Gayasan area, which is part of the Geumbuk-Jeongmaek and where the maritime climate and continental climate overlap, showed Pinus thunbergii, reflecting the local climate characteristics.

• Journal of the Korea Organic Resources Recycling Association
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• v.27 no.2
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• pp.41-49
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• 2019

Livestock manure is a significant source for greenhouse gas (GHG) emission, and a huge amount of GHG emission is generated during its storage. In the present work, lowering temperature was attempted to mitigate methane ($CH_4$) emission from cattle manure (CM) with high solid content. CM was stored for 60 d at $15-35^{\circ}C$ ($5^{\circ}C$ interval). $CH_4$ emission reached $63.6{\pm}3.6kg\;CO_2\;eq./ton\;CM$ at $35^{\circ}C$, which was reduced to $51.6{\pm}1.8$, $24.1{\pm}4.4$, $14.9{\pm}0.5$, and $3.7{\pm}0.1kg\;CO_2\;eq./ton\;CM$ at 30, 25, 20, and $15^{\circ}C$, respectively. After storage, 30% of COD reduction was observed in the CM stored at $35^{\circ}C$, while the COD removal decreased to only 6% at $15^{\circ}C$. It was found that only 3-11% of COD removal was done by anaerobic process, while the rest of COD removal was done by aerobic biological process. Methanobrevibacter and Methanolobus were found to be the dominant species in the CM, and the dominance of Methanolobus psychrophilus increased at lower storage temperature. Specific methanogenic activity test results showed that the inhibition by low temperature was temporal.

• Ocean and Polar Research
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• v.40 no.4
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• pp.213-222
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• 2018

We investigated seasonal variations in the abundance of the adults and the resting eggs of copepods to understand the role of copepod resting eggs for maintaining their population inhabiting the coastal area of Dadaepo, Korea. Adults and resting eggs of copepods were collected bi-monthly with a conical net (45 cm mouth diameter, $330{\mu}m$ mesh size) and van Veen grab ($0.1m^2$ area), respectively, from October 2016 to September 2017. The species of resting eggs were identified using mtCOI gene. The mean abundance of copepods was highest in October ($3686{\pm}1190inds{\cdot}m^{-3}$) and lowest in January ($176{\pm}60inds{\cdot}m^{-3}$) with the dominance of Paracalanus parvus s.l.. Among copepod producing resting eggs, Acartia omorii and Centropages abdominalis were dominant. The mean abundance of resting eggs was the highest in July ($9148{\pm}6787eggs{\cdot}m^{-2}$) and the lowest in October ($530{\pm}348eggs{\cdot}m^{-2}$). Most of the collected resting eggs were identified as A. omorii's. The mean abundances of A. omorii adults and resting eggs were highest in July, and both abundances fluctuated in a similar pattern except in September. In September, A. omorii adults were observed in a state of low abundance, while their resting eggs occurred in a state of high abundance. These results suggest that A. omorii maintain their population by producing a large quantity of resting eggs, particularly diapause eggs, before the seawater temperature rises. These eggs would hatch and be newly recruited to their population when the environmental condition becomes favorable.

• Journal of Life Science
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• v.28 no.12
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• pp.1477-1488
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• 2018

This study investigated the muscles, intestines, and gonads of Sulculus diversicolor supertexta to examine the diversity of microbial communities within examples collected from the Jeju Coast. Using different media, initial pure isolation in MA, 1% BHIA, and 1% TSA indicated that the muscles, intestines, and gonads supported more communities, respectively. In analysis of relative similarity with 16s rRNA sequencing, 190 pure colonies were isolated, and further analysis with NBLAST identified 71 species, 39 genera, 25 families, and five phyla. Homogeny with the reference strain was 91-100%. Microbial communities in S. supertexta consisted of gamma and alpha Proteobacteria (48%), Actinobacteria (32.5%), Firmicutes (16.9%), Deinococcus-Thermus (1.3%), and Bacteroides (1.3%). In all tissue, Psychrobacter cibarius in Moraxellaceae was dominant. Alteromonadaceae, Enterobacteriaceae, Pasturellaceae, Moraxellaceae, Rhodobacteraceae, Geminicoccaceae, Dietziaceae, Intrasporangiaceae, Microbacteriaceae, Micrococcaceae, Micromonosporaceae, Streptomycetaceae, Aerococcaceae, Bacillaceae, Paenibacillaceae, Planococcaceae, and Staphylcoccaceae were commonly isolated across all tissues, and Flavobacteriaceae, Corynebacteriaceae, Yesiniaceae, Vibrionaceae, Hahellaceae, Pseudomonadaceae were also identified from the intestines. In microbial monitoring of four harmful bacteria, Streptomyces albus (96%) showed antibacterial activity against all four strains, and Agrococcus baldri (99%) and Psychrobacter nivimaris (99%) presented against E. Coli and E. aerogens. In addition, some strains with low homogeny were isolated and further experiments are therefore required, for example to refine the antimicrobial substances including new strain investigations. These additional experiments would aim to establish generic resources for the microbial communities in S. Supertexta and provide basic data for applied microbiological research.

• Korean Journal of Heritage: History & Science
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• v.47 no.4
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• pp.92-105
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• 2014

Microbial characteristics of bacterial population were investigated in human remains and soil inside the bones in excavated grave no.4 and no.5 at Keundokgol site, Osu-ri, Buyeo. Phylogenetic characteristics of bacterial populations were analyzed by direct extracting of ancient DNA. In this study, based on the 16S rDNA sequences, in case of grave no.4, 319s from human remain were classified into 11 phyla, and 462s from soil were classified into 16 phyla. In case of grave no.5, 271s from human remain were classified into 10 phyla, and 497s from soil were classified into 11 phyla. Especially, Actinobacteria phylogenetic group are dominant group of bacterial populations in grave no.4 and no.5. Also, most of these were analyzed uncultured group. Thus, the discovery of a diversely microbial community and uncultured group was thought to be due to the specificity of the sample. Conclusively the general excavated human bones were contaminated with soil bacteria species their near around. This results contribute to preservation and management of ancient human bone from archaeological sites.

• Korean Journal of Ecology and Environment
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• v.52 no.3
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• pp.266-273
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• 2019

Heavy metal contamination in freshwater ecosystem has been receiving increased worldwide attention due to their direct or indirect effect on human health and aquatic organisms. In this study, we investigated biological effects such as survival rate, growth rate, emergence rate, sex ratio and mouthpart deformity of Chironomus plumosus. The survival rate of C. plumosus decreased with the increase in heavy metal concentration as well as exposure time after cadmium (Cd) or zinc (Zn) exposure. The growth rate decreased at days 4 and 7 after Cd exposure and significantly reduced at the relatively high concentration of $50mg\;L^{-1}$ Cd. The emergence rate was decreased at $50mg\;L^{-1}$ Cd and $100mg\;L^{-1}$ Zn. The sex ratio showed imbalance pattern at relatively low concentrations (0.5 and $2mg\;L^{-1}$ Cd) with high proportion of male and relatively high concentration ($100mg\;L^{-1}$ Zn) with high proportion of female (60%). In addition, mentum deformities were observed at high concentration of Cd and Zn. These results suggest that heavy metal exposure in aquatic ecosystem may affect biological and morphological responses, and aquatic midge C. plumosus is a potential indicator for assessment of environmental pollutant such as heavy metals.

• Korean Journal of Ecology and Environment
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• v.52 no.2
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• pp.81-93
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• 2019

Phytoplankton is one of the important primary producers providing organic matter through photosynthesis in aquatic environments. In order to determine a temporal and spatial variation in primary productivity after weir construction in the Nakdong River, we investigated carbon uptake rates using in-situ $^{13}C$ labeling experiments and identified algal communities contributing to primary productivity using HPLC-CHEMTAX analysis from October to December, 2017. The primary productivity gradually decreased from fall to early winter season ($249{\sim}933mgC\;m^{-2}d^{-1}$ in October, $64{\sim}536mgC\;m^{-2}d^{-1}$ in November and $60{\sim}274mgC\;m^{-2}d^{-1}$ in December, respectively). This is attributed to the temporally declining light intensity and the decreasing biomass and physiological activity of phytoplankton in winter. The contribution of diatoms to the phytoplankton community in the Nakdong River was approximately 63% at all the sampling sites and seasons, while the contribution of cryptophytes increased from 9% in October to 32% in November and December. The temporal changes in the primary productivity and the dominant phytoplankton species in the mid and downstream weirs of the Nakdong River was investigated for the first time, after construction of the weirs, and major environmental factors controlling the temporal variation in primary productivity and phytoplankton communities were identified in this study. We suggest that seasonal field investigations will provide further information on the major environmental factors which affect the annual variation of primary productivity and phytoplankton communities.

• Journal of odor and indoor environment
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• v.17 no.4
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• pp.355-361
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• 2018

Mold grows more easily when humidity is higher in indoor spaces, and as such is found more often on wetted areas in housing such as walls, toilets, kitchens, and poorly managed spaces. However, there have been few studies that have specifically assessed the level of mold in the indoor spaces of water-damaged housing in the Republic of Korea. We investigated the levels of airborne mold according to the characteristics of water damage types and explored the correlation between the distribution of mold genera and the characteristics of households. Samplings were performed from January 2016 to June 2018 in 97 housing units with water leakage or condensation, or a history of flooding, and in 61 general housing units in the metropolitan and Busan area, respectively. Airborne mold was collected on MEA (Malt extract agar) at flow rate of 100 L/min for 1 min. After collection, the samples were incubated at $25^{\circ}C$ for 120 hours. The cultured samples were counted and corrected using a positive hole conversion table. The samples were then analyzed by single colony culture, DNA extraction, gene amplification, and sequencing. By type of housing, concentrations of airborne mold were highest in flooded housing, followed by water-leaked or highly condensed housings, and then general housing. In more than 50% of water-damaged housing, the level of airborne mold exceeded the guideline of Korea's Ministry of Environment ($500CFU/m^3$). Of particular concern was the fact that the I/O ratio of water-damaged housing was greater than 1, which could indicate that mold damage may occur indoors. The distribution patterns of the fungal species were as follows: Penicillium spp., Cladosporium spp. (14%), Aspergillus spp. (13%) and Alternaria spp. (3%), but significant differences of their levels in indoor spaces were not found. Our findings indicate that high levels of mold damage were found in housing with water damage, and Aspergillus flavus and Penicillium brevicompactum were more dominant in housing with high water activity. Comprehensive management of flooded or water-damaged housing is necessary to reduce fungal exposure.

• Journal of Microbiology and Biotechnology
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• v.31 no.9
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• pp.1231-1240
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• 2021

Members of the genus Bacillus are known to play an important role in promoting plant growth and protecting plants against phytopathogenic microorganisms. In this study, 21 isolates of Bacillus spp. were obtained from the root micro-ecosystem of Suaeda glauca. Analysis of the 16S rRNA genes indicated that the isolates belong to the species Bacillus amyloliquefaciens, Bacillus velezensis, Bacillus subtilis, Bacillus pumilus, Bacillus aryabhattai and Brevibacterium frigoritolerans. One of the interesting findings of this study is that the four strains B1, B5, B16 and B21 are dominant in rhizosphere soil. Based on gyrA, gyrB, and rpoB gene analyses, B1, B5, and B21 were identified as B. amyloliquefaciens and B16 was identified as B. velezensis. Estimation of antifungal activity showed that the isolate B1 had a significant inhibitory effect on Fusarium verticillioides, B5 and B16 on Colletotrichum capsici (syd.) Butl, and B21 on Rhizoctonia cerealis van der Hoeven. The four strains grew well in medium with 1-10% NaCl, a pH value of 5-8, and promoted the growth of Arabidopsis thaliana. Our results indicate that these strains may be promising agents for the biocontrol and promotion of plant growth and further study of the relevant bacteria will provide a useful reference for the development of microbial resources.