• 제목/요약/키워드: DNA바코드

검색결과 45건 처리시간 0.035초

한국산 뿔밀깍지벌레에 대한 정리 (노린재목, 밀깍지벌레과) (Notes on the Indian wax scale, Ceroplastes ceriferus (Fabricius), from Korea (Hemiptera: Coccidae))

  • 이용현;;서수정
    • 한국응용곤충학회지
    • /
    • 제51권2호
    • /
    • pp.157-162
    • /
    • 2012
  • 뿔밀깍지벌레(Ceroplastes ceriferus (Fabricius))는 형태적으로 유사한 C. pseudoceriferus Green과 혼동되어 동정되었으며, 이에 뿔밀깍지벌레에 대한 형태적 특징을 재기재하였다. 이와 더불어 한국산 밀깍지벌레속(屬)의 3종을 동정하기 위한 검색표, 사진 및 DNA바코드 정보도 함께 제공하였다.

한국산 오미자과의 DNA 바코드 (DNA barcoding of Schisandraceae in Korea)

  • 염정원;한상욱;서선원;임채은;오상훈
    • 식물분류학회지
    • /
    • 제46권3호
    • /
    • pp.273-282
    • /
    • 2016
  • The establishment of a DNA barcode database at the regional scale and assessments of the utility of DNA barcodes are crucial for conservation biology and for the sustainable utilization of biological resources. Schisandraceae is a small family consisting of ca. 45 species. It contains many economically important species, such as Schisandra chinensis, which is widely used as a source in tonic beverages and in oriental medicine. In Korea, three species, S. chinensis, S. repanda, and Kadsura japonica, are distributed. We evaluated the level of variation of the DNA sequences of rbcL, matK, and the ITS regions from 13 accessions representing the distributional range of the three species. The three DNA barcode regions were easily amplified and sequenced. The minimum values of the interspecific genetic distances among S. chinensis, S. repanda, and K. japonica either separately or in combination are 4- to 23-fold higher than the maximum value of the intraspecific distance, showing that there is a clear DNA barcoding gap in the regions for Korean Schisandraceae. Phylogenetic analyses of the three DNA barcode regions, separately and simultaneously, indicate that all of the DNA barcode regions are useful for identifying a species of Schisandraceae in Korea. The distinctiveness of the three species of Schisandraceae was also supported at the species level when Chinese and Japanese populations were added. The results of this study indicate that three concatenated regions constitute the best option for DNA barcoding in Schisandraceae in Korea.

한국미기록 작은검정주머니나방속(나비목: 주머니나방과) 작은날개검정주머니나방 보고 (First Report of Genus Canephora (Lepidoptera: Psychidae) in Korea, with a Newly Recorded Species, C. pungelerii)

  • 노승진;변봉규
    • 한국응용곤충학회지
    • /
    • 제57권2호
    • /
    • pp.117-121
    • /
    • 2018
  • 금번 연구를 통해 작은검정주머니나방속이 국내에서 처음 발견되어 보고한다. 작은검정주머니나방속 내 작은날개검정주머니나방에 대한 암컷 형태 특징, 채집지 정보 등을 포함한 이용가능한 모든 정보를 제공하였다. 또한 신속한 종 동정을 위한 DNA 바코드 정보를 작성하였다.

엽록체 DNA 및 핵 DNA 염기서열에 근거한 한국산 나문재속(명아주과)의 분류학적 연구 (Phylogenetic study of the Genus Suaeda(Chenopodiaceae) based on chloroplast and nuclear DNA sequences from Korea)

  • 김석규;정상옥
    • 한국환경생태학회지
    • /
    • 제32권6호
    • /
    • pp.566-574
    • /
    • 2018
  • 한국산 나문재속 식물에 대한 계통학적 유연관계를 밝히고, 분자계통학적 연구를 통해 나문재속 종간 유연관계를 확인할 수 있는 분자마커를 찾아내기 위해 연구를 수행하였다. 핵 리보솜 DNA ITS와 엽록체 DNA matK, psbA-trnH 그리고 trnL-trnF를 분자마커로 사용하였다. ITS 영역은 칠면초와 해홍나물 그리고 해홍나물과 방석나물을 구분하지 못하였다. psbA-trnH와 trnL-trnF 영역의 염기서열은 칠면초와 방석나물을 구분하지 못하였다. 그러나 4종의 분자마커 영역을 조합하여 분석한 결과 나문재속 식물 5종이 각각 독립적인 계통을 형성하는 것을 확인하였다. 따라서 나문재속 계통관계 분석을 위해서 여러 개의 분자마커 조합이 유용할 것으로 판단된다. 나문재속 내 분류군 간의 계통관계를 명확히 밝히기 위해 차후에 좀 더 많은 생태학적, 형태학적 자료를 조사해야 할 것으로 보인다.

천남성(天南星) 유전자 감별을 위한 DNA 바코드 분석 및 Marker Nucleotide 발굴 (Identification of Marker Nucleotides for the Molecular Authentication of Arisaematis Rhizoma Based on the DNA Barcode Sequences)

  • 김욱진;이영미;지윤의;강영민;최고야;김호경;문병철
    • 대한본초학회지
    • /
    • 제29권6호
    • /
    • pp.35-43
    • /
    • 2014
  • Objectives : Official Arisaematis Rhizoma is described only three species, Arisaema amurnse, Arisaema erubescens, and Arisaema heterophyllum, in national Pharmacopoeia. However, other Arisaema species, Arisaema ringens, Arisaema takesimense and Arisaema serratum, also have been distributed as an inauthentic Arisaematis Rhizoma in the herbal market. To develop a reliable molecular authentication method for Arisaematis Rhizoma in species level, we analyzed DNA barcode regions using six Arisaema species. Methods : Thirty-eight samples of six Arisaema plants species (A. amurense, A. amurense f. serratum, A. heterophyllum, A. takesimense, and A. serratum) were collected from different habitate and nucleotide sequences of DNA barcode regions (rDNA-ITS, matK, and rbcL gene) were analyzed after PCR amplification. The species-specific sequences and phylogenetic relations were estimated using entire sequences of three DNA barcodes based on the analysis of ClastalW and UPGMA, respectively. Results : The comparative analysis of DNA barcode sequences were revealed inter-species specific nucleotides to distinguish the medicinal plant of Arisaema Rhizoma in species levels excluding between A. amurense and its subspecies (A. amurense f. serratum) and A. takesimense and A. serratum, respectively. However, we obtained sequence differences enough to discriminate authentic and inauthentic Arisaematis Rhizoma. Therefore, we suggest that these SNP type molecular genetic markers were an reliable method avaliable to identify official herbal medicines. Conclusions : These marker nucleotides could be useful to identify the official herbal medicines by providing definitive information that can identify original medicinal plant and distinguish from inauthentic adulterants and substitutes.

DNA 바코드 분석을 통한 소계(小薊) 및 대계(大薊) 기원식물 감별과 종간 유연관계 분석 (Molecular Authentication and Phylogenetic Analysis of Plant Species for Breeae and Cirsii Herba based on DNA barcodes)

  • 문병철;이영미;지윤의;최고야;천진미;김호경
    • 대한본초학회지
    • /
    • 제28권3호
    • /
    • pp.75-84
    • /
    • 2013
  • Objectives : The origin of Breeae Herba (So-gye) and Cirsii Herba (Dae-gye) is differently prescribed in Korean and Chinese modern pharmacopoeia. Since the similar morphological characteristics and chaotic plant names, moreover, the aerial part of Carduus crispus have been used as the Cirsii Herba. To develop a reliable method for correct identification of these herbal medicines and to evaluate the genetic relationship of these closely related plant species, we analyzed sequences of DNA barcode regions. Methods : Thirty-one samples of 6 medicinal plants (B. segeta, B. setosa, C. japonicum var. maackii, C. setidens, C. chanroenicum, and C. crispus) were collected from different habitate and nucleotide sequences of DNA barcode regions (rDNA-ITS, matK, and rbcL) were analyzed after amplification using appropriate primers reported in previous studies. The nucleotides of species-specific authentic marker and phylogenetic relations were estimated based on the entire sequences of DNA barcodes by the analysis of ClastalW and UPGMA, respectively. Results : In comparative analysis of DNA barcode sequences, we obtained specific nucleotides to discriminate the medicinal plant of Breeae/Cirsii Herba in species level and evaluated the phylogenetic relationship of these species. Futhermore, we identified distinct marker nucleotides enough to authenticate respective species. These sequence differences at corresponding positions were avaliable genetic markers to determine the botanical origins of Breeae Herbal as well as Cirsii Herba. Conclusions : These marker nucleotides would be useful to identify the official herbal medicines by providing of definitive information that can identify each plant species and distinguish from unauthentic adulterants and substitutes.

matK와 rbcL DNA 바코드 분석을 통한 반하(半夏) 및 반하(半夏) 유사 한약재 유전자 감별 (Molecular Authentication of Pinelliae Tuber from its adulterants by the analysis of DNA barcodes, matK and rbcL genes)

  • 이영미;문병철;지윤의;김욱진;김호경
    • 대한본초학회지
    • /
    • 제28권6호
    • /
    • pp.53-58
    • /
    • 2013
  • Objectives : Pinelliae Tuber has been used as a typical unauthentic herbal medicines. Due to the morphological similarity between Pinelliae Tuber and adulterants, the correct authentication is very difficult. Therefore, we introduced DNA barcode to establish a powerful tool for the authentication of Pinelliae Tuner from adulterants. Methods : To obtain DNA barcode regions, genomic DNA was extracted from nineteen specimens of Pinellia ternata, Pinellia pedatisecta, Pinellia tripartita, and Typhonium flagelliforme, and matK and rbcL genes were amplified. For identification of species specific sequences and analysis phylogenetic relationship, a comparative analysis were performed by the ClastalW and UPGMA based on entire sequences of matK and rbcL genes, respectively. Results : In comparison of two DNA barcode sequences, we elucidated the phylogenetic relationship showing distinct four groups depending on species and identified 40 and 20 species specific nucleotides enough to distinguish each species from matK and rbcL gene, respectively. The sequence differences at the corresponding positions were avaliable genetic marker nulceotides to discriminate the correct species among analyzed four species. These results indicated that phylogentic and comparative analysis of matK and rbcL genes are useful genetic markers to authenticate Pinelliae Tubers. Conclusions : The marker nucleotides enough to distinguish P. ternata, P. tripatrita, P. peditisecta, and T. flagelliform, were observed at 40 positions in matK gene and 20 positions in rbcL gene sequence, respectively. These differences can be used to authenticate Pinelliae Tuber from adulterants as well as discriminate each four species.

국내미접 푸른줄까마귀왕나비(나비목, 네발나비과) 보고 (First Discovery of Euploea eunice (Godart, 1819) (Lepidoptera, Nymphalidae) from Korea)

  • 이동준;이재석;김종원;이현;노승진
    • 한국응용곤충학회지
    • /
    • 제61권2호
    • /
    • pp.289-291
    • /
    • 2022
  • 본 연구를 통해 국내미기록속인 까마귀나비속의 푸른줄까마귀왕나비를 최초로 보고한다. 푸른줄까마귀왕나비의 암컷 형태와 생식기, 채집지 등의 정보를 제공하였다. 또한 신속한 종 동정을 위한 DNA 바코드 염기서열을 정보를 제공하였다.

한국의 미기록속 이마줄불청객파리속(신칭)(파리목: 불청객파리과)에 대한 보고 (A Newly Recognized Desmometopa Loew, 1866 (Diptera: Milichiidae), A Commensalistic Dipteran Genus, in South Korea)

  • 어승수;최정환;김일권;김아영
    • 한국응용곤충학회지
    • /
    • 제62권4호
    • /
    • pp.325-331
    • /
    • 2023
  • 본 연구에서는 한국산 미기록속인 이마줄불청객파리속(신칭)과 미기록종인 작은눈이마줄불청객파리(신칭)를 처음으로 보고한다. 우리는 이 종이 포식성 거미의 섭식과정에 관여하는 phoretic relationship의 습성을 갖는 것을 확인하였다. 이 종의 성충에 대한 기재문과 사진 및 DNA바코드 서열을 제공한다.

범용성 DNA 바코드(matK, rbcL) 분석을 통한 독활(獨活) 유전자 감별용 Marker Nucleotide 발굴 (Identification of Marker Nucleotides for the Molecular Authentication of Araliae Continentalis Radix Based on the Analysis of Universal DNA Barcode, matK and rbcL, Sequences)

  • 김욱진;양선규;최고야;문병철
    • 대한본초학회지
    • /
    • 제31권5호
    • /
    • pp.15-23
    • /
    • 2016
  • Objectives : Araliae Continentalis Radix and Angelicae Pubescentis Radix have been used as the same medicinal name Korean and Chinese traditional medicines, respectively. The authentic Araliae Continentalis Radix is described only the root of Aralia continentalis in the Korean Pharmarcopoeia. However, the dried root of Angelica biserrata, Levisticum officinale, or Heracleum moellendorffii also has been distributed adulterants of Araliae Continentalis Radix. To develop a reliable method for identifying Araliae Continentalis Radix from adulterants, we carried out the analyses of universal DNA barcode sequences.Methods : Four plants species were collected from different habitate and nucleotide sequences of matK and rbcL were analyzed. The species-specific sequences and phylogenetic relationship were estimated using entire sequences of two DNA barcodes, respectively.Results : In comparative analysis of matK sequences, we were identified 104 positions of marker nucleotide for Ar. continentalis, 3 for An. biserrata, 4 for L. officinale and 8 for H. moellendorffii enough to distinguish individual species, respectively. Furthermore, we obtained marker nucleotides in rbcL at 42 positions for Ar. continentalis, 5 for An. biserrata and 2 for H. moellendorffii, but not for L. officinale. The phylogenetic tree of matK and rbcL were showed that all samples were clustered into four groups constituting homogeneous clades within the species.Conclusions : We confirmed that species-specific marker nucleotides of matK sequence provides distinct genetic information enough to identify four species. Therefore, we suggest that matK gene is useful DNA barcode for discriminating authentic Araliae Continentalis Radix from inauthentic adulterants.