DNA barcoding of Schisandraceae in Korea |
Youm, Jung Won
(Department of Biology, Daejeon University)
Han, Sang-Wook (Department of Biology, Daejeon University) Seo, Seon Won (Department of Biology, Daejeon University) Lim, Chae Un (Plant Resources Division, National Institute of Biological Resources) Oh, Sang-Hun (Department of Biology, Daejeon University) |
1 | Kim, H. M., S.-H. Oh, G, S. Bhandari, C.-S. Kim and C.-W. Park. 2014. DNA barcoding of Orchidaceae in Korea. Molecular Ecology Resources 14: 499-507. DOI |
2 | Kress, W. J., K. J. Wurdack, E. A. Zimmer, L. A. Weigt and D. H. Janzen. 2005. Use of DNA barcodes to identify flowering plants. Proceedings of the National Academy of Sciences of the United States of America 102: 8369-8374. DOI |
3 | Kress, W. J. and D. L. Erickson. 2007. A two-locus global DNA barcode for land plants: tThe coding rbcL gene complements the non-coding trnH-psbA spacer region. PLoS ONE 2: e508. DOI |
4 | Lahaye, R., M. van der Bank, D. Bogarin, J. Warner, F. Pupulin, G. Gigot, O. Maurin, S. Duthoit, T. G. Barraclough and V. Savolainen. 2008. DNA barcoding the floras of biodiversity hotspots. Proceedings of the National Academy of Sciences of the United States of America 105: 2923-2928. DOI |
5 | Lee, Y. M., B. C. Moon, Y. Ji, H. S. Seo and H. K. Kim. 2013. Development of RAPD-derived SCAR markers and multiplex-PCR for authentication of the Schisandrae Fructus. Korean Journal of Medicinal Crop Science 21: 165-173. (in Korean) DOI |
6 | Liu, Z., G. Hao, Y.-B. Luo, L. B. Thien, S. W. Rosso, A.-M. Lu and Z.-D. Chen. 2006. Phylogeny and androecial evolution in Schisandraceae, inferred from sequences of nuclear ribosomal DNA ITS and chloroplast DNA trnL-F regions. International Journal of Plant Sciences 167: 539-550. DOI |
7 | Ohwi, J. 1965. Flora of Japan. Smithsonian Institution, Washington, DC, 1067 pp. |
8 | Panossian, A. and G. Wikman. 2008. Pharmacology of Schisandra chinensis Bail.: An overview of Russian research and uses in medicine. Journal of Ethnopharmacology 118: 183-212. DOI |
9 | Potter, D., S. M. Still, T. Grebenc, D. Ballian, G. Bozic, J. Franjiae and H. Kraigher. 2007. Phylogenetic relationships in tribe Spiraeeae (Rosaceae) inferred from nucleotide sequence data. Plant Systematics and Evolution 266: 105-118. DOI |
10 | CBOL Plant Working Group. 2009. A DNA barcode for land plants. Proceedings of the National Academy of Sciences of the United States of America 106: 12794-12797. DOI |
11 | Cuenoud, P., V. Savolainen, L. W. Chatrou, M. Powell, R. J. Grayer and M. W. Chase. 2002. Molecular phylogenetics of Caryophyllales based on nuclear 18S rDNA and plastid rbcL, atpB, and matK DNA sequences. American Journal of Botany 89: 132-144. DOI |
12 | Daniel, T. F., L. A. McDade, M. Manktelow and C. A. Kiel. 2008. The "Tetramerium lineage" (Acanthaceae: Acanthoideae: Justicieae): Delimitation and intra-lineage relationships based on cp and nrITS sequence data. Systematic Botany 33: 416-436. DOI |
13 | Edgar, R. C. 2004. MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32: 1792-1797. DOI |
14 | Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791. DOI |
15 | Hao, G., M.-L. Chye and R. M. K. Saunders. 2001. A phylogenetic analysis of the Schisandraceae based on morphology and nuclear ribosomal ITS sequences. Botanical Journal of the Linnean Society 135: 401-411. DOI |
16 | Hebert, P. D. N., A. Cywinska, S. L. Ball and J. R. deWaard. 2003. Biological identifications through DNA barcodes. Proceedings of the Royal Society B: Biological Sciences 270: 313-321. DOI |
17 | Saunders, R. M. K. 1998. Monograph of Kadsura (Schisandraceae). Systematic Botany Monographs. Vol. 54. American Society of Plant Taxonomists, Ann Arbor, MI, 106 pp. |
18 | Hebert, P. D. N., E. H. Penton, J. M. Burns, D. H. Janzen and W. Hallwachs. 2004. Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator. Proceedings of the National Academy of Sciences of the United States of America, 101: 14812-14817. DOI |
19 | Jang, M.-K., J. S. Nam, J. H. Kim, Y.-R. Yun, C. W. Han, B. J. Kim, H.-S. Jeong, K.-T. Ha and M. H. Jung. 2016. Schisandra chinensis extract ameliorates nonalcoholic fatty liver via inhibition of endoplasmic reticulum stress. Journal of Ethnopharmacology 185: 96-104. DOI |
20 | Sang, T., D. Crawford and T. Stuessy. 1997. Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae). American Journal of Botany 84: 1120-1136. DOI |
21 | Saunders, R. M. K. 2000. Monograph of Schisandra (Schisandraceae). Systematic Botany Monographs. Vol. 58. American Society of Plant Taxonomists, Ann Arbor, MI, 146 pp. |
22 | Soltis, P. S., D. E. Soltis and C. J. Smiley. 1992. An rbcL sequence from a Miocene Taxodium (bald cypress). Proceedings of the National Academy of Sciences of the United States of America 89: 449-451. DOI |
23 | Suh, Y. 2007. Schisandraceae Blume. In The Genera of Vascular Plants of Korea. Park, C.-W. (ed.), Academy Publishing Co., Seoul. Pp. 157-158. |
24 | Swofford, D. L. 2002. PAUP*: Phylogenetic analysis using parsimony (* and other methods), version 4.0. Sinauer Associates, Sunderland, MA. |
25 | Tripathi, A. M., A. Tyagi, A. Kumar, A. Singh, S. Singh, L. B. Chaudhary and S. Roy. 2013. The Internal Transcribed Spacer (ITS) region and trnH-psbA are suitable candidate loci for DNA barcoding of tropical tree species of India. PLoS ONE 8: e57934. DOI |
26 | Zhang, J., M. Chen, X. Dong, R. Lin, J. Fan and Z. Chen. 2015. Evaluation of four commonly used DNA barcoding loci for Chinese medicinal plants of the family Schisandraceae. PLoS ONE 10: e0125574. DOI |
27 | Walker, E. H. 1976. Flora of Okinawa and the Southern Ryukyu Islands. Smithsonian Institution Press, Washington, DC, 1159 pp. |
28 | Xiang, X.-G., H. Hu, W. Wang and X.-H. Jin. 2011. DNA barcoding of the recently evolved genus Holcoglossum (Orchidaceae: Aeridinae): A test of DNA barcode candidates. Molecular Ecology Resources 11: 1012-1021. DOI |