• Title/Summary/Keyword: Conclusion Similarity

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Preliminary study on application of augmented reality visualization in robotic thyroid surgery

  • Lee, Dongheon;Kong, Hyoun-Joong;Kim, Donguk;Yi, Jin Wook;Chai, Young Jun;Lee, Kyu Eun;Kim, Hee Chan
    • Annals of Surgical Treatment and Research
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    • v.95 no.6
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    • pp.297-302
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    • 2018
  • Purpose: Increased robotic surgery is attended by increased reports of complications, largely due to limited operative view and lack of tactile sense. These kinds of obstacles, which seldom occur in open surgery, are challenging for beginner surgeons. To enhance robotic surgery safety, we created an augmented reality (AR) model of the organs around the thyroid glands, and tested the AR model applicability in robotic thyroidectomy. Methods: We created AR images of the thyroid gland, common carotid arteries, trachea, and esophagus using preoperative CT images of a thyroid carcinoma patient. For a preliminary test, we overlaid the AR images on a 3-dimensional printed model at five different angles and evaluated its accuracy using Dice similarity coefficient. We then overlaid the AR images on the real-time operative images during robotic thyroidectomy. Results: The Dice similarity coefficients ranged from 0.984 to 0.9908, and the mean of the five different angles was 0.987. During the entire process of robotic thyroidectomy, the AR images were successfully overlaid on the real-time operative images using manual registration. Conclusion: We successfully demonstrated the use of AR on the operative field during robotic thyroidectomy. Although there are currently limitations, the use of AR in robotic surgery will become more practical as the technology advances and may contribute to the enhancement of surgical safety.

Draft Genome Analysis of Antimicrobial Streptomyces Isolated from Himalayan Lichen

  • Kim, Byeollee;Han, So-Ra;Lamichhane, Janardan;Park, Hyun;Oh, Tae-Jin
    • Journal of Microbiology and Biotechnology
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    • v.29 no.7
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    • pp.1144-1154
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    • 2019
  • There have been several studies regarding lichen-associated bacteria obtained from diverse environments. Our screening process identified 49 bacterial species in two lichens from the Himalayas: 17 species of Actinobacteria, 19 species of Firmicutes, and 13 species of Proteobacteria. We discovered five types of strong antimicrobial agent-producing bacteria. Although some strains exhibited weak antimicrobial activity, NP088, NP131, NP132, NP134, and NP160 exhibited strong antimicrobial activity against all multidrug-resistant strains. Polyketide synthase (PKS) fingerprinting revealed results for 69 of 148 strains; these had similar genes, such as fatty acid-related PKS, adenylation domain genes, PfaA, and PksD. Although the association between antimicrobial activity and the PKS fingerprinting results is poorly resolved, NP160 had six types of PKS fingerprinting genes, as well as strong antimicrobial activity. Therefore, we sequenced the draft genome of strain NP160, and predicted its secondary metabolism using antiSMASH version 4.2. NP160 had 46 clusters and was predicted to produce similar secondary metabolites with similarities of 5-100%. Although NP160 had 100% similarity with the alkylresorcinol biosynthetic gene cluster, our results showed low similarity with existing members of this biosynthetic gene cluster, and most have not yet been revealed. In conclusion, we expect that lichen-associated bacteria from the Himalayas can produce new secondary metabolites, and we found several secondary metabolite-related biosynthetic gene clusters to support this hypothesis.

Noise Level Evaluation According to Slice Thickness Change in Magnetic Resonance T2 Weighted Image of Multiple Sclerosis Disease (다발성 경화증 질환의 자기공명 T2 강조영상에서 단면 두께 변화에 따른 잡음 평가)

  • Hong, Inki;Park, Minji;Kang, Seong-Hyeon;Lee, Youngjin
    • Journal of radiological science and technology
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    • v.44 no.4
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    • pp.327-333
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    • 2021
  • Magnetic resonance imaging(MRI) uses strong magnetic field to image the cross-section of human body and has excellent image quality with no risk of radiation exposure. Because of above-mentioned advantages, MRI has been widely used in clinical fields. However, the noise generated in MRI degrades the quality of medical images and has a negative effect on quick and accurate diagnosis. In particular, examining a object with a detailed structure such as brain, image quality degradation becomes a problem for diagnosis. Therefore, in this study, we acquired T2 weighted 3D data of multiple sclerosis disease using BrainWeb simulation program, and used quantitative evaluation factors to find appropriate slice thickness among 1, 3, 5, and 7 mm. Coefficient of variation and contrast to noise ratio were calculated to evaluate the noise level, and root mean square error and peak signal to noise ratio were used to evaluate the similarity with the reference image. As a result, the noise level decreased as the slice thickness increased, while the similarity decreased after 5 mm. In conclusion, as the slice thickness increases, the noise is reduced and the image quality is improved. However, since the edge signal is lost due to overlapped signal, it is considered that selecting appropriate slice thickness is necessary.

The Research Trends and Keywords Modeling of Shoulder Rehabilitation using the Text-mining Technique (텍스트 마이닝 기법을 활용한 어깨 재활 연구분야 동향과 키워드 모델링)

  • Kim, Jun-hee;Jung, Sung-hoon;Hwang, Ui-jae
    • Journal of the Korean Society of Physical Medicine
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    • v.16 no.2
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    • pp.91-100
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    • 2021
  • PURPOSE: This study analyzed the trends and characteristics of shoulder rehabilitation research through keyword analysis, and their relationships were modeled using text mining techniques. METHODS: Abstract data of 10,121 articles in which abstracts were registered on the MEDLINE of PubMed with 'shoulder' and 'rehabilitation' as keywords were collected using python. By analyzing the frequency of words, 10 keywords were selected in the order of the highest frequency. Word-embedding was performed using the word2vec technique to analyze the similarity of words. In addition, the groups were classified and analyzed based on the distance (cosine similarity) through the t-SNE technique. RESULTS: The number of studies related to shoulder rehabilitation is increasing year after year, keywords most frequently used in relation to shoulder rehabilitation studies are 'patient', 'pain', and 'treatment'. The word2vec results showed that the words were highly correlated with 12 keywords from studies related to shoulder rehabilitation. Furthermore, through t-SNE, the keywords of the studies were divided into 5 groups. CONCLUSION: This study was the first study to model the keywords and their relationships that make up the abstracts of research in the MEDLINE of Pub Med related to 'shoulder' and 'rehabilitation' using text-mining techniques. The results of this study will help increase the diversifying research topics of shoulder rehabilitation studies to be conducted in the future.

Evaluation of Spa Destinations' Image & Preference (국내 온천관광지 이미지 및 선호도 평가)

  • Kim, Si-Joong
    • Journal of the Economic Geographical Society of Korea
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    • v.13 no.2
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    • pp.253-269
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    • 2010
  • This study analyzed image similarity, attribute recognition, and preference by multidimensional scaling. The analyses were carried out by 10 spa destinations (Deoksan, Bugok, Onyang, Yuseong, Suanbo, Bomun, Dongrae, Asan, Dogo, Haeundae) in Korea. The results were as follows: First, according to the analyses of image similarity of spa destinations, 'Haeundae, Dongrae and Bomun,' 'Dogo, Onyang, Asan,' and 'Deoksan, Suanbo, Bugok,' made similar image groups separately. However, Yuseong had different image from the other spa destinations in the above. Second, according to the analyses of attribute recognition of spa destinations, Deoksan and Bugok had more competitive ability in terms of 'the incidental facilities of spa destinations, 'Yuseong, Onyang, Asan, and Dogo' showed high competitiveness in terms of 'accessibility of spa destination' and 'tourism conditions.' Haeundae, Dongrae, and Suanbo had weak competitiveness in terms of 'the accessibility of spa destinations.' Third, according to the analyses of preference about spa destinations based on different job groups, office workers had a preference for Yuseong and Bugok, professional workers for Bomun, the people engaged in the farming, fishing, livestock raising and housewives for Haeundae and Dongrae, government officials, students, factory workers, the people living on a pension for Onyang, Deoksan and Dogo, and the self-employed for Suanbo. In conclusion, according to the analyses of spa destination preference based on different residence groups, residents of Seoul, Incheon, Gyunggi province, Gangwon province, Daejeon, Chungcheong province and Jeolla province had a preference for Yuseong, Suanbo, Onyang, Deoksan, and Asan and the residents of Daegu, Gyungsang province, Busan, Ulsan for Bugok, Bomun, and Haeundae.

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Comparisons of Isozyme Patterns in Pythium Species and Application to Pythium Systematics (Isozyme을 이용한 Pythium species의 비교 및 Pythium systematics에의 이용)

  • Lee, Youn-Su
    • The Korean Journal of Mycology
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    • v.21 no.4
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    • pp.293-300
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    • 1993
  • For the enzymes AAT, GmDH, ME, GPI, LDH and IDH, nine, seven, four, nine, seven, and four different phenotypes, respectively, were observed. All six isolates of an unidentified sterile Pythium sp. isolated from field soil showed the same band positions for all six enzymes compared. These phenotypes were not similar to any of the known Pythium species. Two isolates of unknown Pythium species (145 and 299) showed the same band positions for all six enzymes. The phenotypes for all three unknown Pythium spp. were different from the other species in the experiment. Five isolates of P. heterothallicum showed the same band positions for all enzymes compared except one enzyme, lDH. Two isolates of P. torulosum showed the same band petitions for enzymes AAT, GmDH and ME, and three isolates of P. totulosum showed the same positions for enzymes GPI, LDH, and IDH. Single isolates of P. spinosum and P. irregulare showed the same band positions for enzymes AAT, GmDH and GPI. In conclusion, sterile types of Pythium species showed 100% similarities among themselves but did not show any similarity with all isolates of P. heterothallicum and P. spinosum isolate, and showed very low similarities with other isolates in general except with unknown Pythium isolate 306. Similarity levels between different species were low in general with few exceptions.

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A Study on Vegetation Structure Changes between Natural land and Damaged land in Regional Ecological Network at Chungnam Province (충남 광역생태네트워크 자연녹지의 훼손지 식생구조 변화)

  • Song, Ju-Hyeon;Yun, Chung-Weon;Cho, Yong-Hyeon;Kang, Hee-Kyoung
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.20 no.2
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    • pp.13-35
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    • 2017
  • This study was carried out to analyze vegetation structure and change of the disturbed area in forest ecosystem(FE), riparian ecosystem(RE) and coastal ecosystem(CE) related to Regional Ecological Network at Chungnam province through constancy and dominance analysis, species diversity index, similarity index and canonical correlation analysis. Data were collected from April to October in 2015. As a result of constancy and dominance analysis of forest disturbed area, non-effective species(NES) was 30 species(17.0%), exported species(ES) was 98 species(55.7%) and imported species(IS) was 48 species(27.3%) among the total 176 species, respectively. In riparian disturbed area with total 139 species, there were 16 NES(11.5%), 98 ES(70.5%) and 25 IS(18.0%) respectively. In coastal disturbed area with 140 species, there were 20 NES(14.3%), 88 ES(62.9%) and 32 IS(22.9%) respectively. In all types of disturbed areas, the ratio of ES was higher than IS. As a result of species diversity, species richness and shannon's diversity index of disturbed area decreased in all kinds of crown strata such as tree, subtree, shrub and herb layer compared to the control area. As a result of similarity index, that of each type between control site and disturbed site was 0.374 in FE, 0.329 in CE and 0.259 in RE in the order. As a result of the CCA analysis, the number of present species, vine plants ratio and exported species ratio in disturbed area of FE and RE were decreased, and the naturalized plant ratio, imported species ratio and herb ratio were increased. But environmental factors of CE were not shown any clear tendency. In conclusion, many species occupied in control site disappeared into the disturbed area, and the naturalized plants and herb species were abundantly imported in the area. Therefore, it was considered that this study could be applied to the development of long-term and short-term ecological restoration techniques in view of vegetation changes.

Detrended Fluctuation Analysis on Sleep EEG of Healthy Subjects (정상인 수면 뇌파 탈경향변동분석)

  • Shin, Hong-Beom;Jeong, Do-Un;Kim, Eui-Joong
    • Sleep Medicine and Psychophysiology
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    • v.14 no.1
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    • pp.42-48
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    • 2007
  • Introduction: Detrended fluctuation analysis (DFA) is used as a way of studying nonlinearity of EEG. In this study, DFA is applied on sleep EEG of normal subjects to look into its nonlinearity in terms of EEG channels and sleep stages. Method: Twelve healthy young subjects (age:$23.8{\pm}2.5$ years old, male:female=7:5) have undergone nocturnal polysomnography (nPSG). EEG from nPSG was classified in terms of its channels and sleep stages and was analyzed by DFA. Scaling exponents (SEs) yielded by DFA were compared using linear mixed model analysis. Results: Scaling exponents (SEs) of sleep EEG were distributed around 1 showing long term temporal correlation and self-similarity. SE of C3 channel was bigger than that of O1 channel. As sleep stage progressed from stage 1 to slow wave sleep, SE increased accordingly. SE of stage REM sleep did not show significant difference when compared with that of stage 1 sleep. Conclusion: SEs of Normal sleep EEG showed nonlinear characteristic with scale-free fluctuation, long-range temporal correlation, self-similarity and self-organized criticality. SE from DFA differentiated sleep stages and EEG channels. It can be a useful tool in the research with sleep EEG.

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Aspect of Weed Occurrence by Methods of Weed Control in Rice Field (논에서 잡초 방제방법에 따른 제초효과)

  • Kim, Yoon-Ha;Kang, Sang-Mo;Khan, Abdul Latif;Lee, Joon-Hee;Lee, In-Jung
    • Korean Journal of Weed Science
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    • v.31 no.1
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    • pp.89-95
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    • 2011
  • In present study we focused on the weed occurrence and diversity in rice field according to methods of weed control. Experiments comprised of no herbicide treatment (NHT), herbicide treatment (HT) and golden apple snail treatment (GAST) within the three months (July to September) of growing rice. According to results, five to seven different weed species were found in NHT, while two to four different weed species were found in HT and GAST. Monochoria vaginalis was dominant species during growing period in NHT and HT while Lemna paucicostata was the dominant in July but Persicaria hydropiper was dominant for August and September. Simpson's dominance index was highest in GAST(0.96) compared with other treatments (NHT 0.27 and HT : 0.51). The similarity coefficient was 50.31%, 4.65% and 0.38% for NHT versus HT, NHT versus GAST and HT versus GAST, respectively. In conclusion, the weed species diversity, dominance and similarity coefficient were varied in different weed control methods of rice growing.

Validity and Reliability of Korean Version of Home Falls and Accidents Screening Tool (HOME FAST) (한글판 낙상 위험 주거환경 평가 (Home Falls and Accidents Screening Tool; HOME FAST)의 내용이해도 및 신뢰도 연구)

  • Ju, Yumi;Cho, Sun-Young
    • Therapeutic Science for Rehabilitation
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    • v.8 no.4
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    • pp.77-92
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    • 2019
  • Objective : This study aims to obtain the validation of Korean version of HOME FAST using the translation-back translation process and to evaluate the reliability. Methods : Total three stages were conducted which includes forward translation to Korean, test for degree of understanding of translated version, back translation to English, and then review and proof reading process. 21 occupational therapists were participated in the evaluation of understanding of Korean-translated HOME FAST, then some of expressions were modified for better understanding. Korean version was went through back-translation to English. Similarity between the original version and re-translated version were evaluated. Total 75 data from community dwelling elderly group were collected to assess internal consistency. Two occupational therapists simultaneously evaluated for the inter-rater reliability. Results : 11 items of Korean-translated scale were responded as having confused meaning by occupational therapists. There was some modification on expression. In the evaluation of similarity between original version and re-translated version, 3 items were selected as dissimilar items in terms of syntax and 6 items were selected in terms of semantic similarity. After the repetitive modification process, items were obtained conceptual equivalence between two different languages. Internal consistency was .62(KR20) (p<.01) and inter-rater reliability was .97(ICC) (p<.01). Conclusion : Korean version of HOME FAST was finalized through translation-retranslation process. The conceptual equivalence was established and Korean version showed highly reliable. In further study, The modification of items reflecting Korean house and life style should be conducted.