• Title/Summary/Keyword: Citrullus lanatus

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Development of HRM Markers Based on SNPs Identified from Next Generation Resequencing of Susceptible and Resistant Parents to Gummy Stem Blight in Watermelon (수박에서 덩굴마름병 감수성 및 저항성 양친에 대한 차세대 염기서열 재분석으로 탐색된 SNP 기반 HRM 분자표지 개발)

  • Lee, Eun Su;Kim, Jinhee;Hong, Jong Pil;Kim, Do-Sun;Kim, Minkyong;Huh, Yun-Chan;Back, Chang-Gi;Lee, Jundae;Lee, Hye-Eun
    • Korean Journal of Breeding Science
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    • v.50 no.4
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    • pp.424-433
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    • 2018
  • Watermelon (Citrullus lanatus) is an economically important vegetable crop all over the world, which has functional compounds such as lycopene and citrulline. Gummy stem blight caused by Didymella bryoniae is one of the most devastative diseases in watermelon. Single nucleotide polymorphisms (SNPs), which are genetic variations occurring between individuals with respect to a single base, were often used to construct genetic linkage maps and develop molecular markers linked to a variety of horticultural traits and resistance to several diseases. In this study, we developed high-resolution melting (HRM) markers based on SNPs generated from NGS resequencing of two parents in watermelon. Plant materials were C. lanatus '920533' (female and susceptible parent), C. amarus 'PI 189225' (male and resistant parent), and their $F_1$ and $F_2$ progenies. A total of 13.6 Gbp ('920533') and 13.1 Gbp ('PI 189225') of genomic sequences were obtained using NGS analysis. A total of 6.09 million SNPs between '920533' and 'PI 189225' were detected, and 354,860 SNPs were identified as potential HRM primer sets. From these, a total of 330 primer sets for HRM analysis were designed. As a result, a total of 61 HRM markers that have polymorphic melting curves were developed. These HRM markers can be used for the construction of SNP-based linkage maps and for the analysis of quantitative trait loci (QTLs) related to gummy stem blight resistance.

Comparisons of Growth and Fruit Quality of Citrullus lanatus cv. Mudeungsan and Citrullus vulgaris cv. Dalgona Grown in Fertigation and Soilless Culture (무등산수박과 달고나수박의 관비재배와 양액재배에 있어서 생육 및 과실품질의 비교)

  • 이범선;정순주;박순기
    • Journal of Bio-Environment Control
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    • v.8 no.1
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    • pp.19-29
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    • 1999
  • This experiment was conducted to compare with the growth and fruit quality of Citrullus lanatus cv. Mudeungsan and Citrullus vulgaris cv. Dalgona grown in fertigation and soilless culture. Seeds were sown on April 16 and transplanted on April 24, 1998. Cultural systems used in fertigation and soilless culture beds using mixed substrate, coir dust (50%) and perlite (50%). In the plot of fertigation system, the number of leaves of cv. Dalgona were increased more than that of cv Mudeungsan, but leaf area shown inversed trend. Plant growth shown greater in soilless culture than those of fertigation culture. In regardless of cultural systems, soluble solid content in fruit was higher in the cv. Dalgona than that of cv. Mudeungsan, but fruit fresh weight was greater in cv. Mudeungsan compare to the cv Dalgona. Nitrate content in petiole sap of watermelon in regardless of cultivars and cultural systems was 11.4∼13.4mg/gFW on 15 days after transplanting, and then increased to 17.1∼20.6mg/gFW on the fruit growth stage. Phosphorous content was 3.7∼5.7mg/gFW in the early growth stage while decreased to 0.6∼1.1mg/gFW from maturing stage to harvesting stage. Potassium content was increased to 5.8∼6.6mg/gFW in the early growth stage while decreased to 4.0∼4.8mg/gFW from pollination stage to harvesting stage. Calcium content in spa petiole of watermelon was higher in soilless culture as 3.4∼4.1mg/gFW than 2.5∼3.5mg/gFW of fertigation culture, but calcium content in fertigation culture during maturing stage was higher than that of soilless culture. The tendency of magnesium uptake was higher in fertigation culture than that of soilless culture, and was similarly absorbed in the range of 0.9∼1.3mg/gFW in regardless of cultural method after pollination. It was demonstrated that cv. Mudeungsan can be adapted to soilless culture and improved the fruit quality. Consequently, hydroponic possibility for year round culture in the greenhouse was recognized.

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Occurrence of Sclerotinia Rot on Cucurbitaceous Vegetable Crops in Greenhouses (온실재배 박과 채소작물에서의 균핵병 발생)

  • Kim, Wan-Gyu;Cho, Weon-Dae;Jee, Hyeong-Jin
    • The Korean Journal of Mycology
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    • v.27 no.3 s.90
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    • pp.198-205
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    • 1999
  • Cucurbitaceous vegetable crops grown in greenhouses in Korea were surveyed from 1995 to 1997. Incidence of Sclerotinia rot was as high as $30{\sim}70%$ at its maximum on Cucumis melo var. reticulatus (netted melon), Cucumis sativus (cucumber), Cucurbita moschata (pumpkin) and Cucurbita pepo (summer squash) but relatively low on Citrullus lanatus (watermelon) and Cucumis melo var. makuwa (oriental melon). Symptoms of Sclerotinia rot developed on stems of all the cucurbits, fruits of five cucurbits except C. lanatus, petioles of two Cucurbita spp. and leaves of C. moschata. A total of 126 isolates of Sclerotinia sp. were obtained from the lesions and identified as Sclerotinia sclerotiorum based on the morphological and cultural characteristics. The fungus was very frequently isolated from stems and fruits of the cucurbits but rarely from petioles and leaves. Six isolates of the fungus were pathogenic to six cucurbits tested although there was some difference in virulence among the isolates to some of the hosts. C. lanatus was the most susceptible to the isolates, whereas C. melo var. makuwa was the most resistant. C. melo var. reticulatus and C. sativus were relatively susceptible to the isolates, and C. moschata and C. pepo relatively resistant.

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Host Plant and Damage Symptom of Fungus Gnats, Bradysia spp. (Diptera: Sciaridae) in Korea (Fungus gnats, Bradysia spp.의 기주 및 피해증상)

  • 이흥수;김태성;신현열;김형환;김규진
    • Korean journal of applied entomology
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    • v.40 no.2
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    • pp.149-153
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    • 2001
  • We surveyed on the host plants of Fungus gnat, Bradysia app. and found 21 species in the greenhouse and field. These are as follows: Cucumis sativus L., Cucumis melo L., Citrullus lanatus T., Cucurbita moschata F., Lycopersicon esculentum M., Capsicum annuum L (Pepper), Capsicum annuum L (Paprika), Lillium longiflorum T., Dianthus caryophyllus L., Rosa hybrida H., Gerbera jamesonii B., Chrysanthemum morifolium R, Phalaenopsis schilleriane R., Gladiolus grandiflours H., Zingiber officinale R., Cnidium officinale M., Canavalia gladiata DC., Angelica utilis M., Polygonatum odoratum D., Pinus densiflora S., and Pinus thunbergii P. Fungus gnat larvae cause damages to the root and promote decay and wilt by feeding on the roots and burrowing in plant tissue.

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Efficient Adsorption of Methylene Blue from Aqueous Solution by Sulfuric Acid Activated Watermelone Rind (Citrullus lanatus)

  • Lee, Seo-Yun;Choi, Hee-Jeong
    • Applied Chemistry for Engineering
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    • v.32 no.3
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    • pp.348-356
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    • 2021
  • The lignocellulose-based dried watermelon rind (WR) was modified with sulfuric acid, namely SWR for enhancement of methylene blue (MB) adsorption from the aqueous solution. According to FT-IR analysis, after the modification of WR with sulfuric acid, the functional groups of R-SO3H, COOH and -OH groups was formated or enhanced on the surface of the WR. Moreover, the point of zero charge (pHpzc) was changed from 6.3 to 4.1 after modification, which widened the range for adsorbing of cationic dye MB. The adsorption process of MB onto the SWR was suitable for pseudo-2nd-order and Langmuir model and the maximum adsorption capacity of Langmuir was found to be 334.45 mg/g at pH 7. In adition, the adsorption process occurs through the electrostatic interaction, hydrogen bridge formation, electron donor-acceptor relationship, and 𝜋-𝜋 electron dispersing force between functional groups on the carbon surface with MB molecules. Depending on functional groups available on the SWR surface, the MB adsorption mechanism can occur in combination with various interactions.

Population Structure of Stagonosporopsis Species Associated with Cucurbit Gummy Stem Blight in Korea

  • Jeong, Yong-Jik;Kwon, Oh-Kyu;Jeong, A-Ram;Lee, Hyunji;Moon, Hyeran;Lee, O New;Hong, Jeum Kyu;Park, Chang-Jin
    • The Plant Pathology Journal
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    • v.38 no.5
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    • pp.522-532
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    • 2022
  • Gummy stem blight (GSB), a common and serious disease in cucurbits worldwide, is caused by three genetically distinct species: Stagonosporopsis cucurbitacearum (syn. Didymella bryoniae), S. citrulli, and S. caricae. In Korea, however, the three species of Stagonosporopsis have been barely characterized. In this study, 21 Stagonosporopsis isolates were recovered from watermelon (Citrullus lanatus) and muskmelon (Cucumis melo) leaves and stem showing blight symptoms collected from 43 fields in Korea. Sequence analysis performed with an internal transcribed spacer region was not competent to differentiate the Stagonosporopsis isolates. On the contrary, analysis of β-tubulin (TUB) genes and three microsatellite markers, Db01, Db05, and Db06, successfully differentiated Stagonosporopsis isolates. Further sequence analysis identified two Stagonosporopsis species, S. citrulli and S. caricae, and one previously unknown species of Stagonosporopsis. Representative isolates from three species caused dark water-soaked lesions on the detached watermelon and muskmelon leaves with no significant differences in the aggressiveness. Our results indicate that the S. citrulli, S. caricae, and unknown Stagonosporopsis sp. are all causal agents of GSB for both watermelon and muskmelon. This is the first report of a new species and the population structure of Stagonosporopsis species causing GSB in Korea.

Investigation on sink/source related traits and their relation of watermelon germplasm to promote use

  • Hwang, Hyun-Chul;Yi, Jung-Yoon;Rhee, Ju-Hee;Hur, On-Sook;Ro, Na-Young;Sung, Jung-Sook;Lee, Ho-Sun;Lee, Jae-Eun;Lee, Sok-Young
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2018.10a
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    • pp.75-75
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    • 2018
  • Watermelons, Citrullus species(Cucurbitaceae), are native to Africa and have been cultivated since ancient times. T he fruit flesh of wild watermelon is watery, but typically hard-textured, pale-colored and bland or bitter. The familiar sweet dessert watermelons, C. lanatus, featuring non-bitter, tender, well colored flesh, have a narrow genetic base, suggesting that they are originated from a series of selection events in a single ancestral population. In this study, considered as sweet dissert watermelon, genetic resources, C. lanatus, comprising of traditional cultivars and local accessions were collected from 18 different countries in four continents. A total of 60 accessions were characterized morphologically according to RDA genebank descriptors combined with Japan and China, list for 11 qualitative characteristics, leaf length, leaf width, petiole length, petiole diameter-source, stalk end length, stalk diameter, fruit length, fruit diameter, rind thickness, flesh sugar content($^{\circ}brix$), fruit weight-sink, and 6 sink related characters, leaf margin incision-source, fruit shape, fruit skin ground color, fruit skin stain color, fruit skin stain pattern and flesh color-sink, were also investigated. Even though the relatedness between some morphological traits and fruit weight or fruit sweetness showed no significance, the accessions investigated have a great deal of variation for most of the morphological traits. Additionally, the accessions which showed good performance in flesh color and fruit shape (IT271048) and high sugar content of flesh (IT274119, IT290118) above 14brix, were investigated in this experiment. The accessions, which have the information on specific traits including the selected accessions could be introduced, distributed and investigated for further use.

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Development of Non-destructive Measurement System for the Detection of CGMMV Virus in Watermelon Seed(citrullus lanatus L) using Hyperspectral Imaging system (초분광 영상 시스템을 이용한 수박종자(Capsicum annuum L)의 오이 녹반 모자이크 바이러스(CGMMV) 감염의 비파괴 판별 시스템 개발)

  • Bae, Hyung-Jin;lohumi, Santosh;Kandpal, Lalit Mohan;Park, ChanHwan;Lim, Hyoun-Sub;Cho, Byoung-Kwan
    • Proceedings of the Korean Society for Agricultural Machinery Conference
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    • 2017.04a
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    • pp.43-43
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    • 2017
  • 종자산업은 농작물 생산에 중요한 역할을 끼치는 좌우하는 요소 중에 하나로, 우량종자의 확보는 농작물 수급에 중요한 역할을 하는 농업부문의 원천산업이다. 오이 녹반 모자이크 바이러스(CGMMV)는 박과류에 가장 많은 피해를 끼치는 바이러스로 종자전염을 방지하고, 우량종자의 공급을 위해서는 감염종자와 비 감염종자의 판별은 필수적이다. 이에 본 연구에서는 초분광 영상 시스템을 이용하여 수박종자의 CGMMV의 감염 및 비 감염종자를 판별할 수 있는 기술을 개발하고자 하였다. 본 연구에서 사용된 바이러스 감염 종자는 CGMMV 바이러스 감염 수박종자를 사용하였으며, 생산된 종자를 초분광 영상 시스템을 통해 스크린 후, RNA를 추출하여 PCR분석법으로 바이러스의 감염유무를 확인하였으며, 이후 바이러스의 감염유무와 획득된 스펙트럼을 비교 분석하여 판별모델을 개발하고 이를 선별 시스템에 적용하였다. 모델개발에 사용된 초분광 영상 기술은 초분광 SWIR(Shortwave infraed : 1000-2500nm)영상 기술이 다. 획득된 초분광 SWIR 영상을 분석한 결과 바이러스 감염 종자가 유의미한 정확도로 판별이 되는 것으로 나타났다. 초분광 SWIR 영상기술이 바이러스 감염종자와 비감염종자를 비파괴적으로 선별하는데 효과적으로 적용이 가능할 것으로 판단된다.

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Assessment of Genetic Relationship among Watermelon Varieties Revealed by ISSR Marker (Inter-simple sequence repeat (ISSR) marker를 이용한 수박의 품종간 유연관계 분석)

  • Kwon Yong-Sham;Lee Won-Sik;Cho Il-Ho
    • Journal of Life Science
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    • v.16 no.2 s.75
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    • pp.219-224
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    • 2006
  • Inter-simple sequence repeat (ISSR) analysis were used to assess genetic diversity among 18 genotypes of watermelon (Citrullus lanatus Thunb.) including breeding lines and commercial varieties. The 21 ISSR primers selected from 100 primers were showed the amplification of 105 reproducible fragments ranging from about 200 bp to 5000 bp. A total of 58 DNA fragments were polymorphic with an average 2.7 polymorphic bands per primer. The polymorphic primers were divided into 18 anchored primers and 3 non anchored primers. All of the anchored primers were di-nucleotide repeat motif, and was more polymorphic than non anchored primers. Eighteen watermelon genotypes were classified into two large groups. Clustering was in some accordance with the division of fruit shape into 18 watermelon. Therefore, ISSR markers may be suitable for variety discrimination and for constructing a linkage map of watermelon.

Linkage Analysis of the Three Loci Determining Rind Color and Stripe Pattern in Watermelon

  • Yang, Hee-Bum;Park, Sung-woo;Park, Younghoon;Lee, Gung Pyo;Kang, Sun-Cheol;Kim, Yong Kwon
    • Horticultural Science & Technology
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    • v.33 no.4
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    • pp.559-565
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    • 2015
  • The rind phenotype of watermelon fruits is an important agronomic characteristic in the watermelon market. Inheritance and linkage analyses were performed for three rind-related traits that together determine the rind phenotype: foreground stripe pattern, rind background color, and depth of rind color. The inheritance of the foreground stripe pattern was analyzed using three different $F_2$ populations, showing that the striped pattern is dominant over the non-striped pattern. The inheritance analysis of the rind background color was performed using $F_2$ populations of the '10909' and '109905', and the depth of rind color was analyzed using $F_2$ populations of the '90509' and '109905'. Yellow color was found to be dominant over green color, and a deep color was dominant over the standard color. Linkage analysis of the three traits was conducted using three $F_2$ populations in which two traits were segregating. Each pair of traits was inherited independently, which demonstrated that the three traits are not linked. Therefore, we propose a three-locus model for the determination of rind phenotype, providing novel insight that rind phenotype is determined by the combination of three genetically independent loci.