• Mycobiology
• /
• v.43 no.3
• /
• pp.351-353
• /
• 2015

Farfugium japonicum is used in traditional medicine and as an edible herb in China and Korea. In July 2013, leaf spots were observed in F. japonicum seedlings at Ulleung Island, Gyeongsangbuk Province, Korea. Early symptoms on the leaf adaxial surface included roughly circular yellow spots that later developed brown, necrotic centers. The aecia were hypophyllous, cupulate, yellowish, $180{\sim}430{\mu}m$ in diameter, clustered, and erumpent with a peridium with a recurved margin. The aeciospores were globoid, $14{\sim}17{\times}13{\sim}16{\mu}m$, light yellow or colorless, and densely verrucose. The 28S rDNA sequence of the isolate was identical to each other and shared 99% identity with Puccinia caricis. This is the first report of rust caused by P. caricis in F. japonicum in Korea or elsewhere in the world.

• Journal of Korean Society of Transportation
• /
• v.35 no.4
• /
• pp.321-331
• /
• 2017

The objective of this study is to analyze the factors affecting the pedestrian accidents of roundabout near schools. To this end, this study has focus on the comparative analysis of pedestrian accidents across different school areas. The traffic accident data from 2007 to 2014 are collected from TAAS data set of Road Traffic Authority. To develop the pedestrian accident rate model, the linear regression model has been utilized in this study. 28 explanatory variables such as geometry and traffic volume factors are used. The main results are summarized as follows. First, the null hypotheses that the number of pedestrian accidents are the same are rejected. Second, 5 multiple linear regression accident models with higher statistical significance (adjusted $R^2$ of 0.651~0.788) have been developed. Third, while the common variables of 3 models (model I~III) related to school location are evaluated to be the pedestrian island, crosswalk, types of roundabout, elementary school and bus stop. Fourth, while the common variable of 3 models (model III~V) related to near school area or not is evaluated to be pedestrian island, type of roundabout, sidewalk, elementary school, speed hump, speed limit sign and number of entry lane. As a result, the installation of pedestrian islands and crosswalk might be expected to decrease the number of pedestrian accidents near schools.

• Journal of Korea Water Resources Association
• /
• v.36 no.6
• /
• pp.937-947
• /
• 2003

A shoreline, which has no the water depth, moves continuously as waves rise up and recede. Therefore, a special boundary treatment is required to track properly the movements of the shoreline in numerical modeling of the behavior of tsunamis or tides near a coastal zone. In this study, convective terms in nonlinear shallow-water equations are discretized explicitly by using a second-order upwind scheme to describe a moving shoreline more accurately. An oscillatory flow motion in a circular paraboloidal basin has been employed to validate the performance of the developed numerical model. Computed results of instantaneous free surface displacements are compared with those of analytical solutions and existing numerical solutions. The run-up heights in the vicinity of a circular island have also been calculated and obtained numerical results have been shown against available laboratory measurements. A good agreement has been observed.

• Korean Journal of Ichthyology
• /
• v.34 no.4
• /
• pp.225-230
• /
• 2022

The single postlarval specimen (7.53 mm in standard length) of Thalassoma quinquevittatum (Lay & Bennett, 1839), belongs to the family Labridae, was collected by a bongo net from the southern coastal waters of Jeju-do Island, Korea in November 2020. T. quinquevittatum has a deeply curved dorsal contour before the dorsal fin, the oval eyes, and no melanophores throughout the body. While T. amblycephalum has a slightly curved dorsal contour before the center of the dorsal fin, the circular eyes, and few melanophores on the body. A molecular analysis based on 548 base pairs sequences in the mitochondrial DNA cytochrome c oxidase subunit I region shows that the specimen was closely matched to adult T. quinquevittatum (K2P distance=0.002-0.005). We report the first record of T. quinquevittatum in Korean waters, and suggest its new Korean name "Da-seot-jul-saek-dong-nol-rae-gi".

• Korean Journal of Remote Sensing
• /
• v.30 no.3
• /
• pp.351-366
• /
• 2014

The aim of this study was to develop software for beach litter detection that includes a Graphical User Interface (GUI) and uses images taken by a micro-unmanned aerial vehicle. Videos were taken over Doomo pebble beach, Sogye pebble beach, and Heungnam sand beach on the northeast coast of Geojedo (Geoje Island), Korea. Still images of actual beach litter were obtained from the videos. The image processing involved preprocessing, morphological image processing, and image recognition. Comparison with still images showing beach litter demonstrated that the software could generally detect litter larger than 50 cm in size such as Styrofoam buoys and circular fish traps (excluding small pixel-size ropes). Combining the proposed method with the conventional surveying approach is expected to enhance the accuracy of beach litter detection. The new technique will also aid in predicting the amount of beach litter generated along coastlines, which is currently difficult to monitor.

• ALGAE
• /
• v.26 no.1
• /
• pp.41-50
• /
• 2011

Yellow Sea surface sediment samples collected on October 15-31, 2003 were analyzed using the palynological process to investigate the spatial distribution of dinoflagellate resting cysts. The sampling areas comprised four latitudinal transects, the northernmost of which was located off the Shandong Peninsula, China and the southernmost off Jeju Island, Korea. Each transect line was composed of six to nine stations, spanning the distance between the Chinese and Korean coasts. Twenty-five different types of dinoflagellate cysts were identified. Gonyaulax scrippsae, Alexandrium spp. (ellipsoidal type), and G. spinifera were the most dominant at all stations surveyed. Dinoflagellate cysts belonging to the Gonyaulacales comprised over 50% of all cysts collected. The latitudinal distribution trend showed that cyst concentrations along the two middle transects were much higher than those along the two northern and southern transects. Cyst concentrations in the offshore central areas reached their highest values within each transect and gradually decreased toward the Chinese and Korean coasts. Overall, cyst concentrations were markedly elevated in the offshore central Yellow Sea areas and gradually decreased outward in all four directions. This concentric cyst distribution pattern was consistent with the hydrographic features of the Yellow Sea, such as circular current systems, sedimentary properties, and water depth.

• Journal of the Korean Society of Fisheries and Ocean Technology
• /
• v.22 no.4
• /
• pp.32-40
• /
• 1986

A model experiment of purse seine by the circulating water tank was carried out on the changes of net shape and the tension of purseline under operation in two layer current. In the circular tank, the two layer current was made by cutting off the current of upper layer and producing the bottom current by the equipment shown in Fig. 1. The model experiment of purse sein was made on a reduced scale 1 :400, and the experiment was carried out according to the Tauti's model law. When the bottom current of O. 5 knot flows to lower part of three-eighths of net, following results are derived. The depth of sinkerline reached only about 80% of that of no current set. The horizontal shift of sinker line caused by the bottom current is maximized in tight set. The enclosed area by the floatIine immediately after the completion of set net is 61. 5% in tight set, 50. 0 % in loose set and 54. 1 % in lateral set of those in the case of no current. In the first half period of pursing, the tension of the purseline is enhenced by the bottom current and the pattern of increasing is irregular in the tension curves.

• Korean Journal of Microbiology
• /
• v.54 no.4
• /
• pp.448-452
• /
• 2018

The full genome sequence of Bacillus safensis KCTC 12796BP which had been isolated from the marine sponge in the seawater of Jeju Island, was determined by Pac-Bio next-generation sequencing system. A circular chromosome in the length of 3,935,874 bp was obtained in addition to a circular form of plasmid having 36,690 bp. The G + C content of chromosome was 41.4%, and that of plasmid was 37.3%. The number of deduced CDSs in the chromosome was 3,980, whereas 36 CDS regions were determined in a plasmid. Among the deduced CDSs in chromosome, 81 tRNA genes and 24 rRNA genes in addition to one tmRNA were allocated. More than 30 CDSs for sporulation, 16 CDSs for spore coat, and 20 CDSs for germination were also assigned in the chromosome. Several genes for capsular polysaccharide biosynthesis and for flagella biosynthesis and chemotaxis in addition to genes for osmotic tolerance through glycine-choline betaine pathway were also identified. Above all, the biosynthetic gene cluster for anti-allergic compounds seongsanamides were found among two non-ribosomal peptide synthetase (NRPS) gene clusters for secondary metabolites.

• Korean Journal of Microbiology
• /
• v.55 no.1
• /
• pp.69-73
• /
• 2019

During screening of microbes for compounds having cosmetic benefits, we isolated Marinobacter salarius HL2708#2 from lava seawater on Jeju Island, Republic of Korea. The complete genome sequence was determined. Strain HL27080#2 features a circular chromosome of 4,304,603 bp with 57.21% G+C content and a 244,163 bp plasmid with 53.14% G+C. There were 4,180 protein coding sequences identified, along with 49 transfer RNA and 18 ribosomal RNA noncoding genes. The genome harbored genes for the utilization of alcohol, maltose/starch, and monosaccharide as sole carbon sources. Genes responsible for halophilic characteristics and heavy metal resistance could be annotated, as well as aromatic and alkane hydrocarbons. Contrary to the prior report that M. salarius is negative for nitrate and nitrite reduction, nitrate/nitrite reductase along with nitrate/nitrate transporters and nitronate monooxygenase were evident, suggesting that strain HL2708#2 may be able to denitrify extracellular nitroalkenes to ammonia.

• Fisheries and Aquatic Sciences
• /
• v.26 no.9
• /
• pp.558-568
• /
• 2023

Vibrio vulnificus is an aquatic bacterium causing septicemia and wound infection in humans. To understand this pathogen at the genomic level, it was performed whole genome sequencing of a cefoxitin-resistant strain, V. vulnificus 1908-10 possessing virulence-related genes (vvhA, viuB, and vcgC) isolated from Gadeok island coastal seawater in South Korea. The genome of V. vulnificus 1908-10 consisted of two circular contigs and no plasmid. The total genome size was estimated to be 5,018,425 bp with a guanine-cytosine (GC) content of 46.9%. We found 119 tRNA and 34 rRNA genes respectively in the genome, along with 4,352 predicted protein sequences. Virulence factor (VF) analysis further revealed that V. vulnificus 1908-10 possess various virulence genes in classes of adherence, antiphagocytosis, chemotaxis and motility, iron uptake, quorum sensing, secretion system, and toxin. In the comparison of the presence/absence of virulence genes, V. vulnificus 1908-10 had fur, hlyU, luxS, ompU, pilA, pilF, rtxA, rtxC, and vvhA. Of the 30 V. vulnificus comparative strains, 80% of the C-genotype strains have all of these genes, whereas 40% of the E-genotype strains have all of them. In particular, pilA were identified in 80% of the C-type strains and 40% of the E-type strains, showing more difference than other genes. Therefore, V. vulnificus 1908-10 had similar VF characteristics to those of type C strains. Multifunctional-autoprocessing repeats-in-toxin (MARTX) toxin of V. vulnificus 1908-10 contained 8 A-type repeats (GXXGXXXXXG), 25 B.1-type repeats (TXVGXGXX), 18 B2-type repeats (GGXGXDXXX), and 7 C-type repeats (GGXGXDXXX). The National Center for Biotechnology Information (NCBI) Basic Local Alignment Search Tool (BLAST) showed that the RtxA protein of V. vulnificus 1908-10 had the effector domain in the order of cross-liking domain (ACD)-C58_PaToxP-like domain- α/β hydrolase-C58_PaToxP-like domain.