• 제목/요약/키워드: Chain length

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Biosynthesis, Modification, and Biodegradation of Bacterial Medium-Chain-Length Polyhydroxyalkanoates

  • Kim, Do-Young;Kim, Hyung-Woo;Chung, Moon-Gyu;Rhee, Young-Ha
    • Journal of Microbiology
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    • 제45권2호
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    • pp.87-97
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    • 2007
  • Medium-chain-length polyhydroxyalkanoates (MCL-PHAs), which have constituents with a typical chain length of $C_{6}-C_{14}$, are polyesters that are synthesized and accumulated in a wide variety of Gram-negative bacteria, mainly pseudomonads. These biopolyesters are promising materials for various applications because they have useful mechanical properties and are biodegradable and biocompatible. The versatile metabolic capacity of some Pseudomonas spp. enables them to synthesize MCL-PHAs that contain various functional substituents; these MCL-PHAs are of great interest because these functional groups can improve the physical properties of the polymers, allowing the creation of tailor-made products. Moreover, some functional substituents can be modified by chemical reactions to obtain more useful groups that can extend the potential applications of MCL-PHAs as environmentally friendly polymers and functional biomaterials for use in biomedical fields. Although MCL-PHAs are water-insoluble, hydrophobic polymers, they can be degraded by microorganisms that produce extracellular MCL-PHA depolymerase. MCL-PHA-degraders are relatively uncommon in natural environments and, to date, only a limited number of MCL-PHA depolymerases have been investigated at the molecular level. All known MCL-PHA depolymerases share a highly significant similarity in amino acid sequences, as well as several enzymatic characteristics. This paper reviews recent advances in our knowledge of MCL-PHAs, with particular emphasis on the findings by our research group.

Nucleotide sequence analysis of a second set of the polyketide synthase .betha.-ketoacyl synthase and chain length factor genes from the salinomycin-producing streptomyces albus

  • Hyun, Chang-Gu;Park, Kwan-Hyung;C.Richard Hutchinson;Suh, Joo-Won
    • Journal of Microbiology
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    • 제35권1호
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    • pp.40-46
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    • 1997
  • The pWHM220 cosmid with a 24-kb insert cloned from Streptomyces albus ATCC 21838 induces the biosynthesis of a polysther antibiotic similar to salinomycin in Streptomyces invidans. We have analyzed this region by DNA sequencing as well as Southern blot hybridization with type I and type II polyketide synthase (PKS) probes. Surprisingly, we found another set of type II SKS genes only 10-kb from the original PKS genes, salABCDE. The DNA sequence revealed two complete open reading frames (ORFs) named salB2 and salC2, and one partial ORF that does not resemble any known DNA or deduced protein sequence. The salC2 should code for chain length determining factor while the deduced amino acid sequence encoded by salB2 exhibits high similarity to .betha.-ketoacyl synthase from different PKS gene clusters. The highest identity was found for .betha.-keetoacyl synthases from S. argillaceus (MtmP. 59.1% identity), the mithramycin producer and from S. venezuelae ISP5230 (JadA, 52.3% identity), the jadomycin producer. The SalC2 protein clearly resembles its counterparts in order aromatic PKS gene clusters that are believed to influence the length of the polyketide chain. The highest identities observed were to that of S. argillaceus (MtmK, 62.3%) and S. venezuelae ISP 5230 (JadB, 55.1%) proteins, Moreover, the deduced amino acid sequences of the salB2 and salC2 products were 29.0% identical.

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양이온 계면활성제의 알킬사슬에 따른 오염 점토 내 Cs 탈착 특성 연구 (Effect of Alkyl Length of Cationic Surfactants on Desorption of Cs From Contaminated Clay)

  • 김보현;박찬우;양희만;서범경;박소진;이근우
    • 방사성폐기물학회지
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    • 제15권1호
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    • pp.27-34
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    • 2017
  • 본 연구에서는 오염된 점토 내 Cs을 제거하기 위하여, 계면활성제의 소수성 알킬사슬의 길이에 따른 Cs의 탈착특성을 연구하였다. 양이온성 계면활성제로 Alkyl trimethyl ammonium bromide를 사용하였고, 소수성 알킬사슬은 octyl-, dodecyl-, cetyl- 으로 변화시켰다. 소수성 알킬사슬이 길어질수록 montmorillonite 내 계면활성제의 흡착량이 증가하였고, 계면활성제의 층간 흡착으로 층간거리가 증가하는 것으로 나타났다. Cs의 탈착률도 알킬사슬의 길이가 증가함에 따라 향상되었고 cetyl 그룹을 갖는 양이온성 계면활성제는 최대 $992{\pm}2.9%$의 Cs 제거율을 나타냈다.

에폭시 무수화물 경화의 동력학적 연구: 무수화물의 사슬 길이 효과 (Kinetics of Anhydride Curing of Epoxy : Effect of Chain Length of Anhydride)

  • 정익수;이재락
    • Elastomers and Composites
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    • 제40권1호
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    • pp.3-11
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    • 2005
  • 시차열분석계(DSC)를 이용하여 달린(pendant) 탄소카본길이가 8(C-8), 12(C-12), 16(C-16)인 3 가지 종류의 무수화물(ASA)과 두 가지 촉매를 이용한 에폭시 수지의 경화 동력학을 연구하였다. 비등온(Nonisothermal)과 등전환(Isoconversional)법을 사용하였다. 비등온법의 결과는 무수화물의 달린 카본길이에 따른 결과에는 큰 차이가 없었다. 그러나 등전환법에서는 촉매사용에 따라 개시반응의 활성화 에너지가 C-8, C-12, 그리고 C-16의 경우 각각 $61.7{\sim}57.7kJ/mol$, $63.0{\sim}57.3 kJ/mol$, 그리고 $130.4{\sim}94.2 kJ/mol$이었다. 보고된 개시반응의 활성화에너지 20 kJ/mol 과 다른 것은 무수화물의 달린 탄소길이에 따른 효과로 해석된다.

Molecular Dynamic Study of a Polymeric Solution (I). Chain-Length Effect

  • Lee Young Seek;Ree Taikyue
    • Bulletin of the Korean Chemical Society
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    • 제3권2호
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    • pp.44-49
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    • 1982
  • Dynamic and equilibrium structures of a polymer chain immersed in solvent molecules have been investigated by a molecular dynamic method. The calculation employs the Lennard-Jones potential function to represent the interactions between two solvent molecules (SS) and between a constituent particle (monomer unit) of the polymer chain and a solvent molecule (CS) as well as between two non-nearest neighbor constituent particles of the polymer chain (CC), while the chemical bond for nearest neighbor constituent particles was chosen to follow a harmonic oscillator potential law. The correlation function for the SS, CS and CC pairs, the end-to-end distance square and the radius of gyration square were calculated by varying the chain length (= 5, 10, 15, 20). The computed end-to-end distance square and the radius of gyration square were found to be in a fairly good agreement with the corresponding results from the random-flight model. Unlike earlier works, the present simulation rsesult shows that the autocorrelation function of radius of gyration square decays slower than that of the end-to-end distance square.

Modified Polystyrene/Polymethacrylate 블렌드의 상용성에 대한 분자구조 변화의 영향 (Effect of Variation in the Molecular Structure on the Miscibility of Modified Polystyrene/Polymethacrylate Blends)

  • 구충완;김형일;김병철
    • 공업화학
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    • 제10권5호
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    • pp.743-747
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    • 1999
  • 비상용성인 polystyrene(PS)와 polymethacrylate(PMA)의 블렌드에서 분자간 수소결합이 가능하도록 구성고분자를 변성하였다. 공중합을 통해 hydroxystyrene 함량이 몰분율로 각각 7%, 10%, 18% 도입된 poly(styrene-co-4-hydroxystyrene) (modified polystyrene, MPS)을 합성하여 블렌드의 상용성 변화를 살펴보았다. 또한 PMA의 측쇄의 크기가 분자간 수소결합 형성에 미치는 영향을 조사하기 위하여 각각 methyl기, butyl기, hexyl기, ethylhexyl기의 측쇄를 갖는 PMA를 선정하였다. 그 결과 수산기의 함량이 증가함에 따라 분자간 수소결합 형성이 증가하였다. PMA의 측쇄의 크기에 따라 수소결합 형성 정도가 영향을 받아 상용성에 큰 차이가 나타남을 온도변화에 따른 상변화 거동을 통하여 확인하였다. 측쇄의 크기가 증가됨에 따라 입체장애 효과와 증가된 사슬의 운동성 때문에 분자간 수소결합의 형성 및 수소 결합력은 크게 감소하였다.

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Isolation of an Aromatic Polyhydroxyalkanoates-degrading Bacterium

  • JU, HE-SUG;JUNGHO KIM;HOON KIM
    • Journal of Microbiology and Biotechnology
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    • 제8권5호
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    • pp.540-542
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    • 1998
  • Five microorganisms capable of degrading an aromatic medium-chain-length polyhydroxyalkanoate ($PHA_{MCL}$), poly(3-hydroxy-5-phenylvalerate) (PHPV), were isolated from wastewater-treatment sludge. Among the isolates, JS02 showed degrading activity consistantly during several transfers. The isolate JS02 could hydrolyze another aromatic MCL copolyester, poly(3-hydroxy-5-phenoxyvalerate-co-3-hydroxy-7-phenoxyheptanoate), [P(5POHV-co-7POHH)], and other short-chain-length PHAs ($PHA_{SCL}) such as poly(3-hydroxybutyrate) [P3(HB)], poly(3-hydroxybutyrate-co-4-hydroxybutyrate) [P(3 HB-co-4 HB)], and poly(3-hydroxybutyrate-co-3-hydroxyvalerate) [P(3HB-co-3HV)] with relatively low activity. The culture supernatant of JS02 showed hydrolyzing activity for the p-nitrophenyl esters of fatty acids.

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Biodegradation of Hydrocarbons by an Organic Solvent-Tolerant Fungus, Cladosporium resinae NK-1

  • Oh, Ki-Bong;Mar, Woong-Chon;Chang, Il-Moo
    • Journal of Microbiology and Biotechnology
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    • 제11권1호
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    • pp.56-60
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    • 2001
  • A kerosene fungus of Cladosporium resinae NK-1 was examined for its ability to degrade individual n-alkanes and aromatic hydrocarbons by gas chromatography-mass spectrometry, and its organic solvent-tolerance was investigated by making use of the water-organic solvent suspension culture method. It grew on a wide range of solvents of varying hydrophobicities and it was found to have tolerance to various kinds of toxic organic solvents (10%, v/v) such as n-alkanes, cyclohexane, xylene, styrene, and toluene. A hydrocarbon degradation experiment indicated that NK-1 had a greater n-alkane degrading ability compared to that of the other selected strains. C. resinae NK-1, which could utilize 8-16 carbon chain-length n-alkanes of medium chain-length as a carbon source, could not assimilate the shorter chain-length n-alkanes and aromatic hydrocarbons tested so far. The n-alkane degrading enzyme activity was found in the mycelial extract of the organism.

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The Characteristic Self-assembly of Gold Nanoparticles over Indium Tin Oxide (ITO) Substrate

  • Li, Wan-Chao;Lee, Sang-Wha
    • Bulletin of the Korean Chemical Society
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    • 제32권4호
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    • pp.1133-1137
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    • 2011
  • Ordered array of gold nanoparticles (Au NPs) over ITO glass was investigated in terms of ITO pretreatment, particle size, and diamines with different chain length. Owing to the indium-tin-oxide (ITO) layer coated on the glass, the substrate surface has a limited number of hydroxyl groups which can produce functionalized amine groups for Au binding, which resulted in the loosely-packed array of Au NPs on the ITO surface. Diamine ligand as a molecular linker was introduced to enhance the lateral binding of adjacent Au NPs immobilized on the amine-functionalized ITO glass, consequently leading to the densely-packed array of Au NPs over the ITO substrate. The molecular bridging effect was strengthened with the increase of chain length of diamines: C-12 > C-8. The packing density of small Au NPs (< 40 nm) was significantly increased with the increase of C-8 diamine, but large Au NPs (> 60 nm) did not produce densely-packed array on the ITO glass even for the dosage of C-12 diamine.

Polymerase chain reaction - restriction fragment length polymorphism을 이용한 바이러스성 어류 질병 진단 (Diagnosis of viral fish diseases by polymerase chain reaction - restriction fragment length polymorphism)

  • 김명석;박신후;조미영;김진우;박명애
    • 한국어병학회지
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    • 제21권3호
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    • pp.181-188
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    • 2008
  • Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) assay was used to detect and identify four fish viruses, fish iridovirus, viral hemorrhagic septicaemia virus (VHSV), viral nervous necrosis virus (VNNV), hirame rhabdovirus (HRV). Four viruses were detected by PCR with each specific primers. Identification of iridovirus was achieved by digesting the PCR amplified fragment with a restriction enzyme ApaⅠ. It was possible to distinguish positive from false positive PCR amplicons of VHSV by RFLP of PstⅠ or HindⅢ restriction enzymes. VNNV was identified using RFLP of BamHⅠrestriction enzyme and HRV was identified by XbaⅠ restriction enzyme. This approach can be used for more rapid, simple and specific diagnosis of fish viral diseases.