• Title/Summary/Keyword: Cell analysis

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Development of Program for Relative Biological Effectiveness (RBE) Analysis of Particle Beam Therapy

  • Chung, Yoonsun;Ahn, Sang Hee;Choi, Changhoon;Park, Sohee
    • Progress in Medical Physics
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    • v.28 no.1
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    • pp.11-15
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    • 2017
  • Relative biological effectiveness (RBE) of particle beam needs to be evaluated at particle beam therapy centers before the clinical application of the particle beam. However, since RBE analysis is implemented manually, it is useful to have a tool that can easily and effectively handle the data of experiments to generate cell survival curve and to analyze RBE simultaneously. In this work, the development of a program for RBE analysis of particle beam therapy was presented. This RBE analysis program was developed to include two parts; fitting the cell survival curves to linear-quadratic model and calculating the RBE values at a certain endpoint using fitting results. This program was also developed to simultaneously compare and analyze the template results that stored experiment data with photon and particle beam irradiations. The results of the cell survival curve obtained by each irradiation can be analyzed by the user on a desired data after reading the template stored in the easy-to-use excel file. The analysis results include the cell survival curves with error range, which are appeared in the screen and the ${\alpha}$ and ${\beta}$ parameters of linear-quadratic model with 95% confidence intervals, RBE values, and $R^2$ values to evaluate goodness-of-fit of survival curves to model, which are stored in a text cvs file. This software can generate cell survival curve, fit to model, and calculate RBE all at once with raw experiment data, so it helps users to save time for data handling and to reduce the possibility of making error on analysis. As a coming plan, we will create a user-friendly graphical user interface to present the results more intuitively.

Hydrogen Fuel Cell Patent Analysis: Using Knowledge Persistence-based Main Path Analysis and Text Mining (수소연료전지 특허 동향 분석: 지식 지속성 기반 주경로 분석 및 텍스트 마이닝 방법 활용)

  • Sejun Yoon;Hyunseok Park
    • Knowledge Management Research
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    • v.24 no.1
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    • pp.127-145
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    • 2023
  • This paper analyzed a patent trend for technological domain of hydrogen fuel cell, can improve future energy and pollution problems. Patent analysis is used in establishing a technological roadmap which it can discover the current technology capability and future technological development direction. However, the previous patent analysis is qualitative analysis and simple statistical analysis. The reason why it incorrectly analysis patent does not reflect the current technology environment. The current technology environment is development through recombination of technologies. In addition to, the speed of technological development is rapidly growing. So, qualitative analysis does not satisfy the analysis requirements of the times. This paper utilized KP(Knowledge Persistence)-based main path analysis and text mining methods to reflect the current technological environment. As a result, we found core patents, main technology development, and promising technologies for technological domain of the hydrogen fuel cell.

Correlation Analysis between Injury Index of Multi-cell Headrest through k-means Clustering DB (k-means clustering DB를 통한 Multi-cell headrest의 상해지수 간 상관관계 분석)

  • Sungwook Cho;Seong S. Cheon
    • Composites Research
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    • v.37 no.1
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    • pp.46-52
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    • 2024
  • The development of transportation methods has improved human transportation convenience and made it possible to expand the travel radius of people with disabilities who have difficulty moving. However, in the case of WAV (wheelchair Accessible Vehicle), the safety that may occur in a vehicle accident is still lower than that of regular passenger seats. In particular, in the case of a rear-end collision that may occur in a defenseless situation, it can cause fatal neck injuries to disabled passengers. Therefore, a more detailed design plan must be reflected in the headrest to be applied to WAV. In this study, a multi-cell headrest was proposed to implement local compression characteristic distribution of the headrest during rear-end collision of WAV. Afterwards, a correlation analysis was performed between the passenger's NIC (Neck Injury Criterion) and impact energy absorption using the data set construction through analysis and the clustering results using k-means clustering. As a result of clustering, it was confirmed that data clusters with similar characteristics were formed, and a correlation analysis between NIC and impact energy absorption through the characteristics of each cluster was performed. As a result of the analysis, it was confirmed that the softer the cell compression characteristics in Mid3 and Mid6, the more impact energy absorption increases, and the harder the cell compression characteristics in Front2, Mid3, and Mid6, the more effective it is in reducing NIC.

Performance Analysis of ATM Switch Using Priority Control by Cell Transfer Ratio (셀 전송비율에 의한 우선순위 제어방식을 사용한 ATM 스위치의 성능 분석)

  • 박원기;김영선;최형진
    • Journal of the Korean Institute of Telematics and Electronics A
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    • v.32A no.12
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    • pp.9-24
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    • 1995
  • In this paper, we proposed and analysed two kinds of priority control mechanism to archive the cell loss rate requirement and the delay requirement of each class. The service classes of our concern are the high time priority class(class 1) and the high loss priority class(class 2). Two kinds of priority control mechanism is divided by the method of storing the arriving class 2 cell in buffer on case of buffer full. The first one is the method which discarding the arriving class 2 cell, the second one is the mothod which storing the arriving class 2 cell on behalf of pushing out the class 1 cell in buffer. In the proposed priority schemes, one cell of the class 1 is transmitted whenever the maximum K cells of the class 2 is transmitted on case of transmitting the class 1 cell and the class 2 cell sequentially. In this paper, we analysed the cell loss rate and the mean cell delay for each class of the proposed priority scheme by using the Markov chain. The analytical results show that the characteristic of the mean cell delay becomes better for the class 1 cell and that of the cell loss rate becomes better for the class 2 cell by selecting properly the cell transfer ratio according to the condition of input traffic.

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The Effects of Saengkankunbi-tang on Proliferation, Apoptosis and Cell Signaling Pathways of HepG2 Cells (생간건비탕(生肝健脾湯)이 HepG2 cell의 증식, 세포사멸 및 활성조절 신호전달계에 미치는 영향)

  • Kim, Jae-Yong;Kim, Young-Chul;Lee, Jang-Hoon;Woo, Hong-Jung
    • The Journal of Internal Korean Medicine
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    • v.27 no.1
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    • pp.149-165
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    • 2006
  • Objectives: This study was done to evaluate the effects of Saengkankunbi-tang on cell-viability, proliferation, cell-cycle, apoptosis and DNA replication on HepG2 cell and to find out by which molecular-biological mechanism by which Saengkankunbi-tang operates. Methods : The MTT assay, cell counting assay, [3H]-thymidine incorporation assay, flow cytometric analysis, tryphan blue exclusion assay, western blot analysis, quantative RT-PCR were taken. Results : Saengkankunbi-tang had no effect on proliferation, cell-cycle and DNA replications of HepG2 cells, while it improved cell viability and reduced apoptosis, and it activated Akt and NFKB. But, it did not produce an effect on cell viability and apoptosis when P13K/Akt pathway was blocked by LY294002 nor when $NF{\kapa}B$ activation was blocked by DN-$I{\kapa}B$. Conclusion : These results suggests that Saengkankunbi-tang improves cell viability and reduces apoptosis of HepG2 cells, by activating $NF{\kapa}B$ through PI3K/Akt pathway.

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Effect of Polygonati Sibirici Rhizoma on Cell Viability in Human Glioma Cells

  • Kim, Min-Soo;Jeong, Ji-Cheon
    • The Journal of Korean Medicine
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    • v.29 no.1
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    • pp.95-105
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    • 2008
  • Objectives : Although herbal medicines containing flavonoids have been reported to exert anti-tumor activities, it has not been explored whether Hwang-Jeong (Polygonati sibirici Rhizoma, PsR) exerts anti-tumor activity in human glioma. The present study was therefore undertaken to examine the effect of PsR on cell viability and to determine its underlying mechanism in A172 human glioma cells. Methods : Cell viability was estimated by MTT assay. Reactive oxygen species generation and mitochondrial membrane potential were measured by the fluorescence dyes. The phosphorylation of kinases was evaluated by western blot analysis and caspase activity was estimated using colorimetric assay kit. Results : PsR resulted in loss of cell viability in a dose- and time-dependent manner. PsR did not increase reactive oxygen species (ROS) generation and the PsR-induced cell death was also not affected by antioxidants, suggesting that ROS generation is not involved in loss of cell viability. Western blot analysis showed that PsR treatment caused rapid reduction in phosphorylation of extracellular signal-regulated kinase (ERK) without changes in p38 and Jun-NH2-terminal kinase (JNK). U0126, an inhibitor of ERK, increased the PsR-induced cell death, but inhibitors of p38 and JNK did not affect the cell death. PsR induced depolarization of mitochondrial membrane potential. Caspase activity was not stimulated by PsR and caspase inhibitors did not prevent the PsR-induced cell death. Conclusion : Taken together, these findings suggest that PsR results in human glioma cell death through caspaseindependent mechanisms involving down-regulation of ERK.

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Analytical comparison of structural changes of plastic cell-based therapeutic drug storage containers when exposed to cryogenic environments (플라스틱 세포치료제 보관용기의 극저온 환경 노출 시 구조적 변화에 대한 해석적 비교)

  • Park, Jeong-Yeon;Lee, Dong-Mok;Lee, Jienny;Lee, Sun-ray;Yoon, Gil-Sang
    • Design & Manufacturing
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    • v.14 no.2
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    • pp.1-6
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    • 2020
  • Recently, research and commercialization related to the field of cell-based therapeutic drug development has been actively conducted. In order to maintain cell viability and prevent contamination, refrigeration preservation devices, such as CRF (controlled rate freezer) or vapor type LN2 tanks have been developed. On the other hand, the storage container for liquid nitrogen tanks currently on sale minimizes the flow structure to prevent structural defects when stored in a liquid nitrogen tank having a high thermal conductivity than vapor nitrogen. If the cell-based treatment drug is stored in the gaseous LN2 tank as it is, the cell survival after thawing is greatly reduced. It was estimated that the existing storage container structure was a factor that prevented the rapid entry and circulation of gaseous nitrogen into the container. Therefore, this study intends to propose a new supercellular storage container model that can maintain the mechanical strength while maximizing the fluid flow structure. To this end, we estimated that the structural change of the storage container effects on the equivalent stress formed around the through-holes of them when exposed to a cryogenic environment using thermal-structural coupled field analysis. As a result of storage experiments in the gas phase tank of the cell-based therapeutic agent using the developed storage container, it was confirmed that the cell growth rate was improved from 66% to 77%, which satisfied the transportation standards of the FDA(Food and Drug Administration) cell-based therapeutic agent.

Artemisia capillaris Thunb. inhibits cell growth and induces apoptosis in human hepatic stellate cell line LX2

  • Kim, Young-Il;Lee, Jang-Hoon;Park, Seung-Won;Choi, In-Hwa;Friedman, Scott L.;Woo, Hong-Jung;Kim, Young-Chul
    • Advances in Traditional Medicine
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    • v.10 no.4
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    • pp.254-262
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    • 2010
  • Artemisia capillaris (A. capillaries) is known to play roles in many cellular events, such as cell proliferation, differentiation, and apoptosis. We investigated the antifibrogenic efficacy of A. capillaris in the immortalized human hepatic stellate cell line LX2. Cell proliferation was determined by the MTT assay. Cell cycle was analyzed by the flow cytometry. Apoptotic cells were measured using a cell death detection ELISA. Caspase activity was detected by a colorimetric assay. The mRNA level of Bcl-2 and Bax mRNA were measured by real-time PCR. MEK and ERK protein were detected by Western blot analysis. We provide evidence that A. capillaris induces cell cycle arrest, apoptosis, and potently inhibits the mitogen-activated protein kinase pathway. A. capillaris inhibited cell proliferation of LX2 cells in a dose- and time-dependent manner, increased the apoptosis fraction at cell cycle analysis with an accompanying DNA fragmentation, and resulted in a significant decrease in Bcl-2 mRNA levels and an increase in Bax expression. Exposure of LX2 cells to A. capillaris induced caspase-3 activation, but co-treatment of A. capillaris with the pan-caspase inhibitor Z-VAD-FMK, and the caspase-3 inhibitor Z-DEVE-FMK, blocked apoptosis. A. capillaris down-regulated Mcl-1 protein levels and inhibited phosphorylation of MEK/ERK, suggesting that it mediates cell death in LX2 cells through the down-regulation of Mcl-1 protein via a MEK/ERK-independent pathway.

Numerical Analysis on Performance Changes of the Tubular SOFCs according to Current Collecting Method (전류집전 방법에 따른 원통형 고체산화물 연료전지의 성능 변화 수치해석)

  • Yu, Geon;Park, Seok-Joo;Lee, Jong-Won;Lee, Seung-Bok;Lim, Tak-Hyoung;Song, Rak-Hyun;Shin, Dong-Ryul;Kim, Ho-Young
    • Transactions of the Korean hydrogen and new energy society
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    • v.22 no.2
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    • pp.129-138
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    • 2011
  • Performance changes of an anode-supported tubular SOFC including current collectors are analyzed at different current collecting methods using numerical simulation. From the two dimensional numerical model of the solid oxide fuel cell with nickel felts as anodic current collectors and silver wires as cathodic ones, the performance curves and the distributions of temperature, concentration, current density are obtained. Also, the voltage loss of the cell is divided into three parts: activation loss, concentration loss and ohmic loss. The results show that the performance change of the cell is dominantly influenced by the ohmic loss. Although the temperature and concentration distributions are different, the total activation loss and concentration loss are nearly same. And the ohmic loss is divided into each parts of the cell components. The ohmic loss of the anodic current collectorreaches about 60~80% of the cell's total ohmic loss. Therefore, the reduction of the ohmic loss of the anodic current collector is very important for stack power enhancement. It is also recommended that the load should be connected to the both ends of the anodic current collector.