• Title/Summary/Keyword: Cations

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Suppressive Effects of Divalent Cations on Self-splicing Inhibition by Spectinomycin of Group 1 Intron RNA

  • Park, In-Kook
    • Journal of Microbiology
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    • v.37 no.4
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    • pp.243-247
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    • 1999
  • Effects of divalent cations on self-splicing inhibition by the antibiotic spectinomycin of the phage T4 thymidylate synthase intron (td) have been investigated. $Ca^{2+}$ ion at 1mM concentration suppressed splicing inhibition of spectinomycin by 10% and 50 ${\mu}M\;Co^{2+}$ ion also suppressed splicing inhibition of specinomycin by 10%. $Mg^{2+}$ ion at 6 mM concentration decreased splicing inhibition of spectinomycin by 42% while $Mn^{2+}$ ion decreased the splicing inhibition by 10%. $Zn^{2+}$ ion at 10 uM concentration lowered the splicing inhibition by spectinomycin of 15%. Of all divalent cations tested, $Mg^{2+}$ ion was the most effective in suppressing splicing inhibition by specinomycin whereas $Ca^{2+}$ ion was the least effective. The results suggest that spectinomycin may interact with specific and functional $Mg^{2+}$-binding sites within intron RNA that lead to a displacement of $Mg^{2+}$ essential for catalytic activity.

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Electrochemical Studies on Ion Recognition of Alkali Metal Cations by 18-crown-6 in Methanol

  • Chi-Woo Lee;Chang-Hyeong Lee;Doo-Soon Shin;Si-Joong Kim
    • Bulletin of the Korean Chemical Society
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    • v.12 no.5
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    • pp.487-490
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    • 1991
  • Electrochemical studies of alkali metal cations $(Na^+, K^+, Rb^+, Cs^+)$ were performed in methanolic solutions of 18-crown-6 and tetrabutylammonium salts at dropping mercury electrodes (DME) and thin mercury film electrodes (TMFE). All the cations investigated were reduced reversibly at DME in the absence and presence of 18-crown-6, and in the latter the limiting currents were decreased and the reduction potentials shifted to the negative direction. The reduction potentials of the metal ions (0.2 mM) in the presence of the crown (10 mM) were - 2.14 $(Na^+)$, - 2.26 $(K^+)$, - 2.20 $(Rb^+) and - 2.14 $(Cs^+)$ V vs. SCE, respectively. The measured potentials were rationalized with ion recognition of the cations by the crown. Electroreduction at TMFE were highly irreversible. A new representation method of ion recognition is presented. In aqueous solutions, electroreduction of the alkali metal ions were characterized by adsorption.

Alkali Metal Cation Selectivity of [$1_7$]Ketonand in Methanol: Free Energy Perturbation and Molecular Dynamics Simulation Studies

  • 황선구;장윤희;유진하;정두수
    • Bulletin of the Korean Chemical Society
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    • v.20 no.10
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    • pp.1129-1135
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    • 1999
  • Free energy perturbation and molecular dynamics simulations were carried out to investigate the relative binding affinities of [17] ketonand (1) toward alkali metal cations in methanol. The binding affinities of 1 toward the alkali metal cations were calculated to be in the order Li+ > Na+ > K+ > Rb+ > Cs+, whereas our recent theoretically predicted and experimentally observed binding affinities for [18]starand (2) were in the order K+ > Rb+ > Cs+ > Na+ > Li+. The extremely different affinities of 1 and 2 toward smaller cations, Li + and Na+ , were explained in terms of the differences in their ability to change the conformation to accommodate cations of different sizes. The carbonyl groups constituting the central cavity of 1 can reorganize to form a cavity with the optimal M+ -O distance, even for the smallest Li+, without imposing serious strain on 1. The highest affinity of 1 for Li+ was predominantly due to the highest Coulombic attraction between the smallest Li+ and the carbonyl oxygens of 1.

Precipitation of cations by alginate, polyguluronate and polymannuronate

  • Jeong, Dae-Yeong;Seo, Hyeong-Pil;Lee, Dong-Su;Byeon, Jae-Hyeong;Lee, Jin-U
    • 한국생물공학회:학술대회논문집
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    • 2000.11a
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    • pp.495-499
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    • 2000
  • The relative affinity of seaweed alginate, polyguluronate and polymannuronate for cations was investigated. The cations used in this study were $Ca^{2+}$, $Cd^{2+}$, $Co^{2+}$, $Cu^{2+}$, $Fe^{3+}$, $Hg^{2+}$, $Mg^{2+}$, $Mn^{2+}$, $Pb^{2+}$, $Rb^{1+}$, $Sr^{2+}$ and $Zn^{2+}$. The ability of cations to precipitated polymers was determined as the relative affinity of seaweed alginate, polyguluronate and polymannuronate for cations. The relative affinity of polymers for cations in order are as follow: Seaweed alginate: $Fe^{3+}$,$Cu^{2+}$,$Cd^{2+}>Pb^{2+}>Co^{2+}$,$Zn^{2+}>Ca^{2+}>Sr^{2+}$,$Rb^{1+}>Mn^{2+}>Mg^{2+}$,$Hg^{2+}$ Ployguluronate:$Fe^{3+}$,$Cu^{2+}$,$Cd^{2+}>Ca^{2+}$,$Co^{2+}$,$Pb^{2+}>Sr^{2+}$,$Rb^{1+}$,$Zn^{2+}>Hg^{2+}$,$Mn^{2+}>Mg^{2+}$ Polymannuronate:$Fe^{3+}$,$Cd^{2+}$,$Cu^{2+}>Ca^{2+}$,$Pb^{2+}>Zn^{2+}$,$Rb^{1+}$$Sr^{2+}$,$Hg^{2+}>Co^{2+}>Mn^{2+}>Mg^{2+}$

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Hydrogeochemistry of groundwaters in Boeun Area, Korea

  • Park, Seong-Sook;Yun, Seong-Taek;Kim, Kyoung-Ho;Kweon, Jang-Soon;Sung, Ig-Hwan;Lee, Byeong-Dae
    • Proceedings of the Korean Society of Soil and Groundwater Environment Conference
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    • 2003.09a
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    • pp.519-519
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    • 2003
  • We performed a hydrochemical study on a total of 89 bedrock groundwaters collected from preexisting wells (30 to 300 m deep) in the Boeun area. Hydrochemical data showed significant variations in the area, due to varying degrees of anthropogenic pollution. The waters were mostly enriched in Ca and HCO$_3$ but locally contained significant concentrations of anthropogenic constituents in the general order of Cl >NO$_3$>SO$_4$. In particular, about 11% of the examined wells exceeded the drinking water standard with respect to nitrate. We consider that aquifers in the area are locally highly susceptible to the contamination related to agricultural activities. Diagrams showing the relationships between the summation of cations (∑cations) and the concentration of several anions with different origin (natural versus anthropogenic) were used to estimate the relative role of anthropogenic contamination. A good correlation was observed for the relationship between ∑cations and bicarbonate, indicating that water-rock interaction (namely, hydrolysis of silicate minerals) is most important to control the water quality. Thus, we made an assumption that the equivalent of dissolved cations for a water should be equal to the alkalinity, if the chemistry were controlled solely by a set of natural weathering reactions. If we excluded the equivalent quantities of cations and bicarbonate (natural origin) from the acquired data for each sample, the remainder therefore could be considered to reflect the degree of anthropogenic contamination. Finally, we performed a multiple regression approach for hydrochemical data using the ∑cations as a dependent variable and the concentration data of each anion (natural or anthropogenic) as an independent variable. Using this approach, we could estimate the relative roles of anthropogenic and natural processes. Rather than the conventional evaluation scheme based on water quality criteria, this approach will be more useful and reasonable for the evaluation of groundwater quality in a specific region and also can be used for planning appropriate protection and remedial actions.

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Accelerating Effect of Neutral Salts on Alkaline Hydrolysis of Poly(ethylene terephthalate) (I) - Cationic Effect - (중성염의 폴리에틸렌 텔레프탈레이트의 알칼리 가수분해 촉진효과에 관한 연구(I) - 양이온의 영향 -)

  • Do, Sung-Guk;Cho, Hwan
    • Textile Coloration and Finishing
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    • v.6 no.1
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    • pp.33-43
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    • 1994
  • In the present work, to clarify the mechanism of the neutral salt effect on the alkaline hydrolysis of PET, many salts with different cations like LiCl, NaCl, KCl, CsCl were added to the aqueous alkaline solutions. Then PET was hydrolyzed with aqueous solutions of many salts in alkali metal hydroxides under various conditions. Some conclusions obtained from the experimental results were summarized as follows. The reaction rate of the alkaline hydrolysis of PET was increased by the addition of neutral salts and In k was increased nearly linearly with the square root of ionic strength of reaction medium. This fact suggested that the ionic strength effect by Debye-Huckel and Bronsted theory was exerted on the reaction. The specific salt effect was also observed. The reaction rate was increased with the increase in the electrophilicity of cations of neutral salts, i. e., in the order of $Cs^+$/ < $K^+$/ $a^+$/ $i^$^+$. It was considered that the reaction rate was increased in the order of C $s^+$. < $K^+$. $a^+$. $i^+$. because the lowering effect of the cations on the negative charge of PET surface was increased with the electrophilicity of cations. It was thought that $E_{a}$ was increased because the cations of neutral salts decreased the negative charge of PET surface. It, however, was inferred from the increase in ${\Delta}$S* and the decrease in the ${\Delta}$G* that the cations of neutral salts associated with PET increased the collision frequency between carbonyl carbon and OH- ion and then accelerated the reaction rate.te.

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Effects of Divalent Cations on Alkaline Hydrolysis of Poly(ethylene terephthalate) Fabric (2가 양이온이 폴리에틸렌 텔레프탈레이트 직물의 알칼리 가수분해에 미치는 영향)

  • Dho, Seong Kook;Choi, Chin Hyup
    • Textile Coloration and Finishing
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    • v.7 no.4
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    • pp.61-73
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    • 1995
  • Inorganic salts have negative or positive effects on the rates of many chemical reactions and also the rates of acidic and alkaline hydrolysis of carboxylic esters. The direction of salt effects on the hydrolysis of ester depends on the charge of esters. It is expected that the rate of the alkaline hydrolysis of Poly(ethylene terephthalte)(PET), polymeric solid carboxytic polyester with carboxyl end group at the polymer end, is also influenced by inorganic salts. In the present work, to clarify the effect of divalent cations on the alkaline hydrolysis of PET, many salts with divalent cations like $MgCl_{2},CaCl_{2},SrCl_{2},BaCl_{2},$ were added to the aqueous alkaline solutions. Then PET was hydrolyzed with aqueous NaOH solution having many salts under various conditions. Some conclusions obtained from the experimental results were summarized as follows. Many salts with various divalent cations increased or decreased the reaction rate of alkaline hydrolysis of PET depending on their electrophilicity, hydration property, ability of ion pair formation, solubility, and the degree of interactions between divalent cations and anions, etc. The hydrolysis was interrupted in the order of $Ca^{+2} and was generally accelerated in the order of $Ba^{+2}. It was inferred from the increase in ΔS$^*$and the decrease in the ΔG$^*$that the divalent cations $Sr^{+2}$ and $Ba^{+2}$attracted by PET increased the collision frequency between carbonyl carbon and $OH^{-}$ion and then accelerated the reaction rate. $Mg^{+2}$and $Ca^{+2}$decreased the reaction rate because of their strong interaction with $OH^{-}$.

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Spectral and Thermal Studies of Transition Metal PSSA Ionomers

  • Shim, Il-Wun;Risen, William M. Jr.
    • Bulletin of the Korean Chemical Society
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    • v.9 no.6
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    • pp.368-376
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    • 1988
  • Transition metal PSSA ionomers containing Co(II), Ni(II), Cr(III), Ru(III), and Rh(III) are investigated by IR, Far-IR, UV-Vis and DSC. Reliable IR Spectroscopic criteria are established for assessing the degree of ion-exchange of PSSA ionomers and the local structures around metal cations in them. In the hydrated transition metal PSSA ionomers, the ionic groups are solvated by water molecules and there is no significant interactions between sulfonate group and metal cations. The visible spectra indicated that metal cations are present as [M$(H_2O)_6$]$^{n+}$ with Oh symmetry. Their $T_g$ values increase as the extent of ionic site concentration increases, but there is no direct dependence of $T_g$ on the nature of metal cations or their oxidation states. Thus, the water content in PSSA ionomer is found to have dominant influence on $T_g$ of hydrated transition metal PSSA ionomers. Dehydration of the hydrated transition metal PSSA ionomers results in direct interaction between ionic groups and significant color changes of the ionomers due to the changes of the local structures around metal cations. On the base of spectral data, their local structures are discussed. In case of dehydrated 12.8 and 15.8 mol % transition metal PSSA ionomers, no glass transition is observed in 25-$250^{\circ}C$ region and this is believed to arise from the formation of highly crosslinked structures caused by direct coordination of sulfonate groups of metal cations. In the 6.9 mol % transition metal PSSA ionomers, the glass transition is always observed whether they are hydrated or dehydrated and this is though to be caused by the sufficient segmental mobility of the polymer backbone.

Determination of Exchangeable Cations in Soils Affected by Different Types of Salt Accumulation (염류집적 유형이 다른 토양의 교환성 양이온 측정)

  • Lee, Ye-Jin;Yun, Hong-Bae;Kim, Rog-Young;Lee, Jong-Sik;Song, Yo-Sung;Sung, Jwa-Kyung;Yang, Jae-E.
    • Korean Journal of Soil Science and Fertilizer
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    • v.45 no.2
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    • pp.135-142
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    • 2012
  • Exchangeable cations are often overestimated especially in salt-affected soils due to the presence of high levels of soluble ions in soil solution. Thus, quantitative analysis of the soil exchangeable cation based on ammonium acetate extraction method {(Exch. Cation)$_{total}$} requires additional process to remove the free ions (pre-washing) in soil with distilled water or alcohol {(Exch. Cation)$_{pw}$} or subtraction of the soluble ion contents from the total exchangeable cations {(Exch. Cation)$_{ref}$}. In this research, we compared the three different methods for the determination of exchangeable cations in soils affected by different types of salt accumulation such as the soils from upland, plastic film house, and reclaimed tidal land. In upland soils, non-saline and non-sodic soils, the regular ammonium acetate extraction method did not have any problem to determine the content of exchangeable cations without any additional process such as the pre-washing method or the subtraction method. However, the contents of exchangeable cations in the salt-affected soils might be determined better with the pre-washing method for the plastic film house soils and with the subtraction method for the reclaimed tidal land soils containing high Na.

A Variety of Activation Methods Employed in “Activated-Ion” Electron Capture Dissociation Mass Spectrometry: A Test against Bovine Ubiquitin 7+ Ions

  • Oh, Han-Bin;McLafferty, Fred W.
    • Bulletin of the Korean Chemical Society
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    • v.27 no.3
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    • pp.389-394
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    • 2006
  • Fragmentation efficiencies of various ‘activated-ion’ electron capture dissociation (AI-ECD) methods are compared for a model system of bovine ubiquitin 7+ cations. In AI-ECD studies, sufficient internal energy was given to protein cations prior to ECD application using IR laser radiation, collisions, blackbody radiation, or in-beam collisions, in turn. The added energy was utilized in increasing the population of the precursor ions with less intra-molecular noncovalent bonds or enhancing thermal fluctuations of the protein cations. Removal of noncovalent bonds resulted in extended structures, which are ECD friendly. Under their best conditions, a variety of activation methods showed a similar effectiveness in ECD fragmentation. In terms of the number of fragmented inter-residue bonds, IR laser/blackbody infrared radiation and ‘in-beam’ activation were almost equally efficient with ~70% sequence coverage, while collisions were less productive. In particular, ‘in-beam’ activation showed an excellent effectiveness in characterizing a pre-fractionated single kind of protein species. However, its inherent procedure did not allow for isolation of the protein cations of interest.