• Title/Summary/Keyword: Calmodulin binding

검색결과 63건 처리시간 0.026초

Structure and expression analysis of the OsCam1-1 calmodulin gene from Oryza sativa L.

  • Phean-o-pas, Srivilai;Limpaseni, Tipaporn;Buaboocha, Teerapong
    • BMB Reports
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    • 제41권11호
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    • pp.771-777
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    • 2008
  • Calmodulin (CaM) proteins, members of the EF-hand family of $Ca^{2+}$-binding proteins, represent important relays in plant calcium signals. Here, OsCam1-1 was isolated by PCR amplification from the rice genome. The gene contains an ORF of 450 base pairs with a single intron at the same position found in other plant Cam genes. A promoter region with a TATA box at position-26 was predicted and fused to a gus reporter gene, and this construct was used to produce transgenic rice by Agrobacterium-mediated transformation. GUS activity was observed in all organs examined and throughout tissues in cross-sections, but activity was strongest in the vascular bundles of leaves and the vascular cylinders of roots. To examine the properties of OsCaM1-1, the encoding cDNA was expressed in Escherichia coli. The electrophoretic mobility shift when incubated with $Ca^{2+}$ indicates that recombinant OsCaM1-1 is a functional $Ca^{2+}$-binding protein. In addition, OsCaM1-1 bound the CaMKII target peptide confirming its likely functionality as a calmodulin.

IQGAP1내에 존재하는 IQ 부위들의 CaM 결합 특성 분석 (Analysis of calmodulin binding property of IQ motifs of IQGAP1)

  • 장덕진
    • 분석과학
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    • 제24권6호
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    • pp.527-532
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    • 2011
  • IQGAP1은 세포 내에서 암세포화, 세포이동과 같은 다양한 기능을 수행하고 있으며, $Ca^{2+}$-비의존성 calmodulin (CaM) 결합 단백질로 잘 알려져 있다. IQGAP1내에는 IQ부위가 4 번 반복해서 나타나는데, 이 부위가 IQGAP1의 CaM 결합에 중요한 역할을 한다고 알려져 있다. 이전의 연구를 통해 4개의 IQ 부위 모두 $Ca^{2+}$/CaM과의 결합에 관여하고, IQ3와 IQ4는 $Ca^{2+}$이 결합되지 않는 상태의 CaM인 proCaM 결합에 관여 한다고 알려져 있다. 그러나, 이러한 각각의 IQ 부위와의 결합성이 CaM과 직접적인 결합인지, 아니면 다른 단백질이 매개하는 간접적인 결합인지 알려져 있지 않았다. 따라서, 본 연구에서는 IQGAP1의 각각의 IQ 부위와 CaM의 결합성을 직접적으로 알아보기 의해 in vitro에서 조사해 보았다. 그 결과, 흥미롭게도 이전의 결과와는 다르게 4개의 IQ 부위 중에서 IQ3는 의미있는 $Ca^{2+}$-비의존성 CaM결합성이 있음을 알게 되었고, IQ1는 약한 $Ca^{2+}$-의존성 CaM 결합성이 있음을 알게 되었다. 반면에, 다른 IQ 부위들은 CaM과의 결합력이 약하거나 없음을 확인하였다. 또한, 기존의 IQ 부위 이외에 IQ(2.7-3)과 IQ(3.5-4.4) 부위가 의미있는 CaM 결합성이 있음을 확인하게 되었다. 따라서, 본 연구 결과 CaM이 IQGAP1을 기존의 보고와는 다른 방식으로 조절할 수 있을 가능성이 있음을 알게 되었고, 새로운 결합 부위 동정을 통해 IQGAP1과 CaM의 결합이 미치는 생리학적인 의미를 연구할 수 있는 토대를 마련하였다.

IQGAP3에 존재하는 IQ 부위의 칼모듈린 결합 특성 (Characterization for calmodulin binding activity of IQ motifs on the IQGAP3)

  • 장덕진
    • 분석과학
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    • 제25권5호
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    • pp.333-338
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    • 2012
  • IQGAPs는 세포 내에서 암세포화, 세포이동, 세포분열과 같은 다양한 기능을 수행하고 있으며, 대표적인 calmodulin (CaM) 결합 단백질로, human의 경우 3 개의 isoform이 알려지고 있다. IQGAPs는 각각 네 개의 IQ 부위를 가지고 있으며, 이들이 CaM과의 결합에 관여한다고 보고되고 있으나, 현재까지 IQGAP1에 비해 IQGAP3에서는 각각의 IQ 부위가 가지는 CaM 결합 특성에 대해선 연구가 미비한 실정이다. 따라서, 본 연구에서는 IQGAP3 내의 IQ 부위들과 CaM과의 결합성을 연구하였다. 이러한 연구를 수행한 결과, 네 개의 IQ부위가 의미 없는 CaM 결합성을 가지는 IQGAP1과는 다르게, IQGAP3는 IQ2와 IQ3가 $Ca^{2+}$-비의존성 CaM 결합을 보이고, IQ1과 IQ4는 결합성이 없음을 알 수 있었다. 또한, IQGAP1에서 새롭게 알려진 $Ca^{2+}$-의존성 CaM 결합 부위인 IQ(3.5-4.4) 부위가, IQGAP3에서도 잘 보존되어 있음을 알 수 있었다. 본 연구를 통해 IQGAP3의 IQ부위는 IQGAP1와는 다른 CaM 결합성이 있음을 알게 되었다. 이러한 결과는 각각의 IQGAP isoform들이 각기 다른 CaM 결합성으로 세포 내에서 다른 생리작용을 수행할 가능이 있음을 제시한다.

Purification and Properties of Novel Calcium-binding Proteins from Streptomyces coelicolor

  • Chang, Ji-Hun;Yoon, Soon-Sang;Lhee, Sang-Moon;Park, I-Ha;Jung, Do-Young;Park, Young-Sik;Yim, Jeong-Bin
    • Journal of Microbiology
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    • 제37권1호
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    • pp.21-26
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    • 1999
  • Two novel calcium-binding proteins, named CAB-I and CAB-II, have been isolated from Streptomyces coelicolor. Purification of the calcium-binding proteins involved heat treatment, fractionation with ammonium sulfate, acid treatment, anion exchange and hydrophobic interaction column chromatography, FPLC gel filtration, and preparative isoelectric focusing. A chelex competitive assay and 45Ca autoradiography verified the calcium-binding ability of the proteins. The major band CAB-II has an apparent molecular weight of 26,000 determined by SDS-polyacrylamide gel electrophoresis and 340,000 determined by gel filtration. The isoelectric point of this molecule showed the acidic nature of the molecule. N-terminal amino acid sequence analysis shows homology to rat Ca2+/calmodulin-dependent protein kinase-II (CAB-II) and yeast phosphoprotein phosphatase (CAB-I).

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The Regulation of AP-1 DNA Binding Activity by Long-term Nicotine Stimulation in Bovine Adrenal Medullary Chromaffin Cells: Role of Second Messengers

  • Lee, Jin-Koo;Choi, Seong-Soo;Suh, Hong-Won
    • The Korean Journal of Physiology and Pharmacology
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    • 제6권2호
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    • pp.109-112
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    • 2002
  • The signal pathways involved in the regulation of AP-1 DNA binding activity in long-term nicotine stimulated bovine adrenal medullary chromaffin (BAMC) cells have not been well characterized. To understand the involvement of second messengers in the regulation of AP-1 DNA binding activity, the present study was designed to define the time-course for inhibition of nicotine-induced responses by cholinergic antagonists, $Ca^{2+}$ and calmodulin (CaM) antagonists, and calcium/calmodulin-dependent protein kinase (CaMK) II inhibitor using electrophoretic mobility shift assay. Nicotine $(10{\mu}M)$ stimulation increased AP-1 DNA binding activity at 24 hr after treatment. Posttreatment with hexamethonium (1 mM) plus atropine $(1{\mu}M)$ (HA), nimodipine $(1{\mu}M),$ or calmidazolium $(1{\mu}M)$ at 0.5, 3, and 6 hr after the nicotine treatment significantly inhibited the AP-1 DNA binding activity increased by long-term nicotine stimulation. However, posttreatment with HA, nimodipine, or calmidazolium at 9 or 12 hr after the nicotine treatment did not affect the nicotine-induced increase of AP-1 DNA binding activity. The pretreatment of BAMC cells with various concentrations of KN-62 inhibited the increase of AP-1 DNA binding activity induced by nicotine in a concentration-dependent manner. KN-62 $(10{\mu}M)$ posttreatment beginning at 0.5, 3, or 6 hr after the nicotine treatment significantly inhibited the increase of AP-1 DNA binding activity. However, KN-62 posttreatment beginning at 9 or 12 hr after the nicotine treatment did not affect the increase of AP-1 DNA binding activity. This study suggested that stimulation (for at least 6 hr) of nicotinic receptors on BAMC cells was necessary for increase of AP-1 DNA binding activity, and activation of $Ca^{2+},$ CaM, and CaMK II up to 6 hr at least seemed to be required for the increase of nicotine-induced AP-1 DNA binding activity.

Isolation and Characterization of a Novel Calcium/Calmodulin-Dependent Protein Kinase, AtCK, from Arabidopsis

  • Jeong, Jae Cheol;Shin, Dongjin;Lee, Jiyoung;Kang, Chang Ho;Baek, Dongwon;Cho, Moo Je;Kim, Min Chul;Yun, Dae-Jin
    • Molecules and Cells
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    • 제24권2호
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    • pp.276-282
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    • 2007
  • Protein phosphorylation is one of the major mechanisms by which eukaryotic cells transduce extracellular signals into intracellular responses. Calcium/calmodulin ($Ca^{2+}/CaM$)-dependent protein phosphorylation has been implicated in various cellular processes, yet little is known about $Ca^{2+}/CaM$-dependent protein kinases (CaMKs) in plants. From an Arabidopsis expression library screen using a horseradish peroxidase-conjugated soybean calmodulin isoform (SCaM-1) as a probe, we isolated a full-length cDNA clone that encodes AtCK (Arabidopsis thaliana calcium/calmodulin-dependent protein kinase). The predicted structure of AtCK contains a serine/threonine protein kinase catalytic domain followed by a putative calmodulin-binding domain and a putative $Ca^{2+}$-binding domain. Recombinant AtCK was expressed in E. coli and bound to calmodulin in a $Ca^{2+}$-dependent manner. The ability of CaM to bind to AtCK was confirmed by gel mobility shift and competition assays. AtCK exhibited its highest levels of autophosphorylation in the presence of 3 mM $Mn^{2+}$. The phosphorylation of myelin basic protein (MBP) by AtCK was enhanced when AtCK was under the control of calcium-bound CaM, as previously observed for other $Ca^{2+}/CaM$-dependent protein kinases. In contrast to maize and tobacco CCaMKs (calcium and $Ca^{2+}/CaM$-dependent protein kinase), increasing the concentration of calmodulin to more than $3{\mu}M$ suppressed the phosphorylation activity of AtCK. Taken together our results indicate that AtCK is a novel Arabidopsis $Ca^{2+}/CaM$-dependent protein kinase which is presumably involved in CaM-mediated signaling.

Isolation and Characterization of Calmodulin 2 (CICAM2) Gene from Codonopsis lanceolata

  • Lee, Kang;In, Jun-Gyo;Yu, Chang-Yeon;Min, Byung-Hoon;Chung, Ill-Min;Kim, Se-Young;Kim, Yeong-Chae;Yang, Deok-Chun
    • Plant Resources
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    • 제7권3호
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    • pp.174-180
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    • 2004
  • Calmodulin, a $Ca^{2+}$-binding protein, has no enzyme activity. It combines with $Ca^{2+}$ and makes variable proteins to an active form. Calmodulin 2 is a ubiquitous protein in plants. To investigate the defense mechanism against various stresses, a clone encoding a calmodulin 2 protein was isolated from a cDNA library prepared from taproot mRNAs of Codonopsis lanceolata. The cDNA, designated CICAM2, is 719 nucleotides long and has an open reading frame of 450 bp with a deduced amino acid sequence of 149 residues. The deduced amino acid sequence of CICAM2 showed a high similarity with calmodulins of P. x hybrida (P27163) 97%, N. tabacum (BAB61908) 97%, S. tuberosum (AAA74405) 96%, Z. mays (CAA74307) 92%, C. richardii (AF510075) 93%, M. truncatula (AAM81203) 91%, and G. max (P62163) 91%. The transcriptional expression of the CICAM2 gene, was gradually increased by the CaCl$_2$ treatment. Whereas its expression And it was gradually decreased in the cold stress treatment.ent.

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$Ca^{2+}$ CALMODULIN CAUSES RAB3A TO DISSOCIATE FROM SYNAPTOSOMAL MEMBRANES

  • Park, Jae-Bong;Christoper C. Farnsworth;John A. Glomset
    • 한국생물물리학회:학술대회논문집
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    • 한국생물물리학회 1996년도 정기총회 및 학술발표회
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    • pp.38-38
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    • 1996
  • Rab3A is a synaptic vesicle-associated, GTP-binding protein that has been implicated in the regulation of neurotransmission. We show here that Ca2+/calmodulin can form a 1:1 complex with Rab3A and cause it to dissociate from synaptosomal membranes. Formation of the complex requires both the lipidated C-terminus of Rab3A and the presence of guanine nucleotide. (omitted)

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Identification of another calmodulin-binding domain at the C-terminal region of AtCBP63

  • Kim, Sun-Ho;Kang, Yun-Hwan;Han, Hay-Ju;Bae, Dong-Won;Kim, Min-Chul;Lim, Chae-Oh;Chung, Woo-Sik
    • Journal of Plant Biotechnology
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    • 제36권1호
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    • pp.53-58
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    • 2009
  • Calcium signals can be transduced by binding calmodulin (CaM), a $Ca^{2+}$ sensor in eukaryotes, is known to be involved in the regulation of diverse cellular functions. We isolated a CaM-binding protein 63 kD (AtCBP63) from the pathogen-treated Arabidopsis cDNA expression library. Recently, AtCBP63 was identified as a CaM bining protein. The CaM binding domain of AtCBP63 was reported to be located in its N-terminal region, In this study, however, we showed that ACaM2 could specifically bind to second CaM-binding domain (CaMBD) of AtCBP63 at the C-terminal region. The specific binding of CaM to CaM binding domain was confirmed by a gel mobility shift assay, a split ubiquitin assay, site-directed mutagenesis, and a competition assay using a $Ca^{2+}$/CaM-dependent enzyme. The gene expression of AtCBP63 was induced by pathogens and pathogens related second messengers. This result suggests that a CaM binding protein, AtCBP63, may play role in pathogen defense signaling pathway.

Calmodulin 단백질의 형태변화를 이용한 광섬유 형광센서에 의한 $Ca^{2+}$의 정량 (Determination of $Ca^{2+}$ by Fiber Optic Fluorosensor Based on the Conformational Change of the Protein Calmodulin)

  • 이창섭;양승태
    • 분석과학
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    • 제8권3호
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    • pp.221-227
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    • 1995
  • $Ca^{2+}$에 대하여 특이한 선택성을 보이는 광섬유형광센서에 대하여 연구하였다. 이 센서는 $Ca^{2+}$과 형광성 킬레이트를 형성하는 단백질 Calmodulin(CaM)을 사용하였으며, 두 갈래로 된 광섬유 다발의 끝면에 플루오르세인 이소티오시아네이트로써 형광 표지된 Calmodulin(FCaM)으로 만든 용액을 투석막 안에 넣어서 제작하였다. 이 센서의 감응 메카니즘은 FCaM이 $Ca^{2+}$과 결합하여 킬레이트를 형성할 때에 나타나는 형광 스펙트럼의 이동 현상을 바탕으로 한다. CaM은 $Ca^{2+}$과 결합할 때에 형태변화를 일으키며, 이로 인해 유발되는 FCaM의 형광세기 변화로써 농도를 결정하였다. 광전자증배관으로 형광의 세기를 측정하여 $Ca^{2+}$에 대한 검정곡선을 작성하였으며, 센서의 $Ca^{2+}$에 대한 검출한계와 $Mg^{2+}$, $Eu^{3+}$, $La^{3+}$들에 의한 방해효과, 감응 시간 및 수명을 조사하였다.

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