• Molecules and Cells
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• v.22 no.3
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• pp.323-327
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• 2006

DNA barcoding, an inventory of DNA sequences from a standardized genomic region, provides a bio-barcode for identifying and discovering species. Several recent studies suggest that the sequence diversity in a 648 bp region of the mitochondrial gene for cytochrome c oxidase I (COI) might serve as a DNA barcode for identifying animal species such as North American birds, insects and fishes. The present study tested the effectiveness of a COI barcode in discriminating Korean bird species. We determined the 5' terminus of the COI barcode for 92 species of Korean birds and found that species identification was unambiguous; the genetic differences between closely related species were, on average, 25 times higher than the differences within species. We identified only one misidentified species out of 239 specimens in a genetic resource bank, so confirming the accuracy of species identification in the banking system. We also identified two potential composite species, calling for further investigation using more samples. The finding of large COI sequence differences between species confirms the effectiveness of COI barcodes for identifying Korean bird species. To bring greater reliability to the identification of species, increased intra- and interspecies sampling, as well as supplementation of the mitochondrial barcodes with nuclear ones, is needed.

• Journal of the Korea Institute of Information and Communication Engineering
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• v.22 no.4
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• pp.611-616
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• 2018

RFID-based Smart cabinets can make a recognition error owing to the electromagnetic wave interference. This paper proposes and implements a smart cabinet system for inventory management using RFID, especially which can be applied to biological laboratories. We calculate the optimal value of partition distance for the higher recognition rate between RFID tags and the reader, and the optimal partition thickness for electromagnetic wave absorption to achieve the higher recognition rate, in which two kinds of the partitions have been tested, a pure steel partition with various thickness and a thin steel partition attached with electromagnetic waves absorber. The experimental results show that the most recommended partition structure for the smart cabinets is one with the partition distance of 30cm and the partition thickness of 1mm attached with the electromagnetic wave absorption tapes.

• Journal of Information Management
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• v.40 no.1
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• pp.157-181
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• 2009

As the information technology is evolved and the human genome project is finalized over the world, the Bioinformatics - the integration of abundant Biological science and information technology - has shown up and is continuously being advanced. Together with the evolution of Bioinformatics, the websites dealing with Bioinformation have been set up to provide relevant information to the Bioscientists. Among the numerous global websites, the preferred websites by the majority of domestic Bioscientists are BRIC (Biological Research Information Center) of POSTECH(Pohang University of Science and Technology) in Korea, CCBB(Center for Computational Biology and Bioinformatics) of KISTI(Korea Institute of Science and Technology Information), KOBIC(Korean Bioinformation Center) of KRIBB(Korea Research Institute of Bioscience and Biotechnology), NCBI(National Center for Biotechnology Information) in USA, EBI(European Bioinformatics Institute) in Europe and DDBJ(DNA Data Bank of Japan) in Japan. In this paper, the comparative analysis was executed by investigating contents status and functions of the above-mentioned 6 websites. In addition, questionnaire survey of Bioscience Researchers' utilization status and their needs to those 6 websites was conducted.

• Science of Emotion and Sensibility
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• v.21 no.3
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• pp.151-164
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• 2018

The appropriate interpretation of social cues is a crucial ability for everyday life. While processing socially relevant information, beyond the low-level physical features of the stimuli to emotional information is known to influence human cognition in various stages, from early perception to later high-level cognition, such as working memory (WM). However, it remains unclear how the influence of each type of emotional information on cognitive processes changes in response to what has occurred in the processing stage. Past studies have largely adopted face stimuli to address this type of research question, but we used a unique class of socially relevant motion stimuli, called biological motion (BM), which depicts various human actions and emotions with moving dots to exhibit the effects of anger, happiness, and neutral emotion on task performance in perceptual and working memory. In this study, participants determined whether two BM stimuli, sequentially presented with a delay between them (WM task) or one immediately after the other (perceptual task), were identical. The perceptual task showed that discrimination accuracies for emotional stimuli (i.e., angry and happy) were lower than those for neutral stimuli, implying that emotional information has a negative impact on early perceptual processes. Alternatively, the results of the WM task showed that the accuracy drop as the interstimulus interval increased was actually lower in emotional BM conditions than in the neutral condition, which suggests that emotional information benefited maintenance. Moreover, anger and happiness had distinct impacts on the performance of perception and WM. Our findings have significance as we provide evidence for the interaction of type of emotion and information-processing stage.

• Journal of Digital Convergence
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• v.14 no.3
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• pp.235-241
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• 2016

Among recent issues emerging in the areas related to the society, health has received the most attention. In this paper, for a patient unable to do self-care because of worsened diseases, a biological information transfer method is proposed by which the disease information can be securely managed, by attaching an implantable device into the body. Our method object of the invention is to prevent a third party from illegally intercepting and interfering with the biological information attached to the insertion device in the body. In the proposed technique to improve the safety of the patient between the hospital and physician by assigning each code to the biometric information of the patient in order to prevent a third party tapping and interfering. In addition, our method is assigned a code necessary for encoding in advance to confirm the biological information between the patient and the hospital (doctor) in a manner dividing the bio-information code. In particular, the proposed technique makes a third party unable to illegally tap or interfere in, by previously generating a code used for encoding so that it can be stored in the database of the hospital, which not only decreased hospital care time to 6.9%, but also increased work efficiency rate up to 12.7%.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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• v.10 no.3
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• pp.139-144
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• 2005

To investigate the long-term variation of water qualities, we have daily monitored physio-chemical characteristics of surface water in the Geum River estuary from June 1996 to April 2004. We found that the water qualities were determined by three dominant factors : 1. fluvial input from Geum River ($28.3\%$), 2. chemical processes such as nitrification and phosphate addition originated from sediment resuspension and domestic sew- age input ($18.6\%$), 3. biological processes such as nutrient consumption by primary producers ($13.5\%$). The factor 1 (fluvial input) effectively affected the water quality of the estuary particularly during the normal or low river discharge. The factor 2 (chemical processes) and the factor 3 (biological processes) showed distinct seasonal differences due to their relative strengths of biological activities. The factor 3 was a governing parameter during the period of spring algal bloom in 2004. For the spring period, an empirical equation derived from the multi-regression analyses showed that the in-situ chlorophyll-a distributions in the estuarine water were successfully simulated by the phosphate concentrations and N/P ratios. Therefore we suggest that phosphate functions as a limiting factor for the primary productivity in the Geum River estuary for the dry season, especially during spring.

• Genomics & Informatics
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• v.13 no.1
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• pp.7-14
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• 2015

During recent years, there has been exponential growth in biological information. With the emergence of large datasets in biology, life scientists are encountering bottlenecks in handling the biological data. This study presents an integrated geographic information system (GIS)-ontology application for handling microbial genome data. The application uses a linear referencing technique as one of the GIS functionalities to represent genes as linear events on the genome layer, where users can define/change the attributes of genes in an event table and interactively see the gene events on a genome layer. Our application adopted ontology to portray and store genomic data in a semantic framework, which facilitates data-sharing among biology domains, applications, and experts. The application was developed in two steps. In the first step, the genome annotated data were prepared and stored in a MySQL database. The second step involved the connection of the database to both ArcGIS and $Prot{\acute{e}}g{\acute{e}}$ as the GIS engine and ontology platform, respectively. We have designed this application specifically to manage the genome-annotated data of rumen microbial populations. Such a GIS-ontology application offers powerful capabilities for visualizing, managing, reusing, sharing, and querying genome-related data.

• Journal of The Korean Association For Science Education
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• v.12 no.3
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• pp.35-47
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• 1992

The purpose of this study was to develop a data base system for the information on science education research and development. As a part of this study, a data base program was developed on the Macintosh SE using the 4th Dimension from ACI. The data base consisted of two files, dissertation and journal. The information on the 107 theses including the master's theses and the doctoral dissertations from the Department of Scince Education, Seoul National University and on the 640 papers on science education from the first issues to the 1991 issues of five selected science education journals was input into the data base. The selected five Journals were Journal of the Korean Association for Research in Science Education(published by the Korean Association for Research in Science Education, 148 papers), Teaching Physics(published by Korean Physical Society, 164 papers),Chemical Education(published by The Korean Chemical Society, 98 papers), The Korean Journal of Biological Education(published by The Korean Society of Biological Education, 148 papers), and Journal of Science Education(published by Science Education Center, College of Education, Seoul National University,82 papers).

• Interdisciplinary Bio Central
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• v.2 no.4
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• pp.13.1-13.8
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• 2010

The National BioResource Project of Japan is a governmental project to promote domestic/international research activities using biological resources. The project has 27 biological resources including three cereal resources. The core center and sub-center which historically collected the cereal resources were selected for each cereal program. These resources are categorized into several different types in the project; germplasm, genetic stocks, genome resources and database information. Contents of rice resources are wild species, local varieties in East and Southwest Asia & wild relatives, MNU-induced chemical mutant lines, marker tester lines, chromosome substitution lines and other experimental lines. Contents of wheat resources are wild strains, cultivated strains, experimental lines, rye wild and cultivated strains; EST clones and full-length cDNA clones. Contents of barley resources are cultivar and experimental lines, core collection, EST/cDNA clones, BAC clones, their filters and superpool DNA. Each resource is accessible from the online database to see the contents and information about the resources. Links to the genome information and genomic tools are also important function of each database. The major contents and some examples are presented here.

• Journal of the Society of Disaster Information
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• v.5 no.1
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• pp.10-27
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• 2009

The fear briefly became reality in the U.S. after 9/11, as man-made anthrax spores were found in letters and in east coast post offices on a number of occasions. Anthrax attacks must be related to the terrorist attacks of September 11. These two accidents changed the situation completely. Characteristics are summarized as belows. First, it is necessary for all countries to create each own appropriate countermeasures against bioterrorism. In addition, it is urgent to consider countermeasures focusing on bioterror characteristics that terrorists may use biological agents because they can be extremely difficult to detect and do not cause illness for several hours to several days. Otherwise, those attacks will also show the panic and very real danger posed by the release of such toxins on an unsuspecting public. Second, it is crucial to manage the result thoroughly. A biological weapon is useful to a terrorist group mainly as a method of creating mass panic and disruption to a society. Because it is not easy to predict and collect information about how terrorists utilize pathogenic microbe as well as terror measures in their activities, more realistic approach should be taken to reduce damage. Third, to expand investment in research and development is necessary. Considering advances in microbiology and genetic engineering lately, it is likely that new pathogenic microbe would be created by the enemy. For that matter, it is imperative that medical countermeasures should be devised.