• Title/Summary/Keyword: Biological estimation

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A Basic Study on the Variation of Temperature Characteristics for Attenuation Coefficient and Sound Velocity in Biological Tissues

  • Park, Heung-Ho
    • Journal of Biomedical Engineering Research
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    • v.14 no.3
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    • pp.273-282
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    • 1993
  • This study is concerned with the temperature dependence characteristics of ultrasound parameters in biological tissues, which are basic on the noninvasive deep body temperature estimation. Used parameters are ultrasonic attenuation coefficient and sound velocity In order to accomplishment our purpose, several signal processing methods were used. Attenua4iorl coefficient was estimated by spectral difference method and sound velocity was estimated by P-P method. And we also examined these methods through a series of IN VITRO experi mentis that used tissue-mimicking phantom samples and biological tissue samples. In order to imitate the biological soft tissue two kinds of phantom samples are used, one is agar phantom sample which is composed of agar, graphite, N-propyl alcohol and distilled water, and the other is fat phantom sample which is composed of pure animal fat. And the ultrasound transmission mode and reflection mode experiments are performed on the pig's spleen, kidney and fat. As a result, it is found that the temperature characteristics are uniform in case of phan- tom samples but not in biological tissues because of complicate wave propagation within them. Consequently, the possibility of temperature measurement using ultrasound on biological tissue is confirmed and its results may contribute to the establishment of reference values of internal temperature measurement of biological tissues.

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Community Analysis of Benthic Macroinvertebrates and Biological estimation of water pollution level of Olympic Park in Seoul, Korea (서울 올림픽공원의 저서동물 군집분석 및 생물학적 수질평가)

  • Bae, Kyung-Seok;Cho, Seok-Ju;Yoon, Jong-Cheol
    • Journal of environmental and Sanitary engineering
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    • v.21 no.2 s.60
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    • pp.20-29
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    • 2006
  • Analysis of benthic macroinvertebrate community and biological estimation of water quality by the benthic macroinvertebrates were conducted at Olympic Park at its nearby waters in Seoul from December, 2004 to September, 2005. The benthic macrovertebrates were 49 species. Among them, 39 species of aquatic insects were included 11 species in odonata, 9 species in diptera, 7 species in hemiptera, 6 species in coleoptera, 3 species in ephemeroptera, 2 species in trichoptera and 1 species in lepipdoptera, and 10 species of non-insects were 6 species in mollusca, 2 species in hirudinea and 2 species in oligochaeta. Species number of lakes, Seongnae Stream within and outside the Olympic Park was 25 species, 35 species and 33 species, respectively. Individual number of lakes, Seongnae Stream within and outside the Olympic Park was $131\;inds/2.5m^2\;239\;inds/2.5m^2\;556\;inds/2.5m^2$, respectively. Mean dominance indices of lakes, Seongnae Stream within and outside the Olympic Park was 0.74, 0.61 and 0.72, respectively. According to the saprobic system based on the ESB index(Ecological score of benthic macroinvertebrate community), all survey sites are $\beta-mesosaprobic$ waters. To increase of abundance of benthic macroinvertebrates, regular interval monitoring has to be enforced and standard of water quality for the ecological ponds of Olympic Park has to be prepared.

Estimation of Substring Selectivity in Biological Sequence Database (생물학 서열 데이타베이스에서 부분 문자열의 선적도 추정)

  • 배진욱;이석호
    • Journal of KIISE:Databases
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    • v.30 no.2
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    • pp.168-175
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    • 2003
  • Until now, substring selectivities have been estimated by two steps. First step is to build up a count-suffix tree, which has statistical information about substrings, and second step is to estimate substring selectivity using it. However, it's actually impossible to build up a count-suffix tree from biological sequences because their lengths are too long. So, this paper proposes a novel data structure, count q-gram tree, consisting of fixed length substrings. The Count q-gram tree retains the exact counts of all substrings whose lengths are equal to or less than q and this tree is generated in 0(N) time and in site not subject to total length of all sequences, N. This paper also presents an estimation technique, k-MO. k-MO can choose overlapping length of splitted substrings from a query string, and this choice will affect accuracy of selectivity and query processing time. Experiments show k-MO can estimate very accurately.

Camera Position Estimation in Castor Using Electroendoscopic Image Sequence (전자내시경 순차영상을 이용한 위에서의 카메라 위치 추정)

  • 이상경;민병구
    • Journal of Biomedical Engineering Research
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    • v.12 no.1
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    • pp.49-56
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    • 1991
  • In this paper, a method for camera position estimation in gasher using elechoendoscopic image sequence is proposed. In orders to obtain proper image sequences, the gasser in divided into three sections. It Is presented thats camera position modeling for 3D information extvac lion and image distortion due to the endoscopic lenses is corrected. The feature points are represented with respect to the reference coordinate system below 10 percents error rate. The faster distortion correction algorithm is proposed in this paper. This algorithm uses error table which is faster than coordinate transform method using n -th order polynomials.

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A New Algorithm to Estimate Urine Volume from 3D Ultrasound Bladder Images (3D 초음파 영상에서 방광 내 잔뇨량 추정을 위한 새로운 알고리즘)

  • Cho, Tae Sik;Lee, Soo Yeol;Cho, Min Hyoung
    • Journal of Biomedical Engineering Research
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    • v.37 no.1
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    • pp.31-38
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    • 2016
  • For the patients with bladder dysfunction, measurement of urine volume inside the bladder is very critical to avoid bladder failure. In measuring urine volume inside a bladder, low-resolution 3D ultrasound images are widely used. However, urine volume estimation from 3D ultrasound images is prone to big errors and inconsistency because of low spatial resolution and low signal-to-noise ratio of ultrasound images. We developed a new robust volume estimation algorithm which is not computationally expensive. We tested the algorithm on a lab-built ultrasound bladder phantom and volunteers. The average error rate of the human bladder volume estimation was 5.9% which was better than the commercial machine.

Walking Will Recognition Algorithm for Walking Aids Based on Torque Estimation (모터 토크 추정을 통한 보행보조기의 의지파악 알고리즘)

  • Kong, Jung-Shik
    • Journal of Biomedical Engineering Research
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    • v.31 no.2
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    • pp.162-169
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    • 2010
  • This paper deals with the recognition algorithm of walking will based on torque estimation. Recently, concern about walking assistant aids is increasing according to the increase in population of elder and handicapped person. However, most of walking aids don't have any actuators for its movement. So, general walking aids have weakness for its movement to upward/download direction of slope. To overcome the weakness of the general walking aids, many researches for active type walking aids are being progressed. Unfortunately it is difficult to control aids during its movement, because it is not easy to recognize user's walking will. Many kinds of methods are proposed to recognize of user's walking will. In this paper, we propose walking will recognition algorithm by using torque estimation from wheels. First, we measure wheel velocity and voltage at the walking aids. From these data, external forces are extracted. And then walking will that is included by walking velocity and direction is estimated. Here, all the processes are verified by simulation and experiment in the real world.

Estimation of the Evoked Potential using Bispectrum with Confidence Thresholding (Bispectrum을 이용한 EP 신호 복원에서의 Wiener process 응용)

  • Park, J.I.;Ahn, C.B.
    • Proceedings of the KOSOMBE Conference
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    • v.1995 no.11
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    • pp.265-268
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    • 1995
  • Signal averaging technique to improve signal-to-noise ratio has widely been used in various fields, especially in electrophysiology. Estimation of the EP(evoked potential) signal using the conventional averaging method fails to correctly reconstruct the original signal under EEG(electroencephalogram) noise especial]y when the latency times of the evoked potential are not identical. Therefore, a technique based on the bispectrum averaging was proposed for recovering signal waveform from a set o noisy signals with variable signal dalay. In this paper an improved bispectrum estimation technique of the RP signal is proposed using a confidence thresholding of the EP signal in frequency domain in which energy distribution of the EP signal is usually not uniform. The suggested technique is coupled with the conventional bispectrum estimation technique such as least square method and recursive method. Some results with simulated data and real EP signal are shown.

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Estimation of Residual Biomass, PHB, and Nutrient Concentrations by Supplied Amount of Ammonia Solution in Fermentation of Alcaligenes latus

  • Lee, Yong-Woo;Tsuneo Yamane
    • Journal of Microbiology and Biotechnology
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    • v.9 no.5
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    • pp.554-561
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    • 1999
  • A novel estimation method was investigated for determining the concentrations of residual biomass, poly-3-hydroxybutyrate (PHB), and main nutrients including carbon and nitrogen sources, phosphate, and mineral ions from the supplied amount of ammonia solution used for a pH-control solution and nitrogen source in a PHB fermentation. The estimation equations for a batch culture and a fed-batch culture were derived from the relationship between the growth rate of residual biomass and the feed rate of the pH-control solution, and then were applied to the batch culture and the fed-batch cultures of Alcaligenes latus. This method was successfully applied to estimate the concentrations of residual biomass, PHB, and nutrients.

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Power Spectrum Estimation of EEG Signal Using Robust Filter (로버스트 필터를 이용한 EEG 신호의 스펙트럼 추정)

  • 김택수;허재만
    • Journal of Biomedical Engineering Research
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    • v.13 no.2
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    • pp.125-132
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    • 1992
  • Background EEG signals can be represented as the sum of a conventional AR process and an innovation process. It Is know that conventional estimation techniques, such as least square estimates (LSE) or Gaussian maximum likelihood estimates (MLE-G ) are optimal when the innovation process satisfies the Gaussian or presumed distribution. When the data are contaminated by outliers, however, these assumptions are not met and the power spectrum estimated by conventional estimation techniques may be fatally biased. EEG signal may be affected by artifacts, which are outliers in the statistical term. So the robust filtering estimation technique is used against those artifacts and it performs well for the contaminated EEG signal.

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256-Channel Trans-Admittance Scanner with Lesion Estimation Algorithm for Breast Cancer Detection

  • Oh, Tong-In;Kim, Kyu-Sik;Lee, Jae-Sang;Woo, Eung-Je;Park, Chun-Jae
    • Journal of Biomedical Engineering Research
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    • v.26 no.4
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    • pp.207-214
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    • 2005
  • Breast cancer detection using electrical impedance techniques is based on numerous experimental findings that cancerous tissues have higher electrical conductivity values than normal tissues. Lately, by taking advantage of the structure of current flows underneath a planar probe of array electrodes, a mathematical formula to find lesions from a measured trans­admittance map has been derived. In order to experimentally validate its mathematical analysis and the suggested lesion estimation algorithm, we developed a 256-channel trans-admittance scanner (TAS) for probing anomalies underneath a planar array of electrodes. In this paper, we describe the design and implementation of the TAS. Its performance together with the lesion estimation algorithm was evaluated using saline phantoms. Further studies are proposed to validate the system on human subjects.