• 제목/요약/키워드: Biochemical information

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승용 씨암말의 생식기 유래 세균의 분포 및 항생제 감수성 양상 (Distribution and antimicrobial susceptibility patterns of bacteria isolated from genital tract of riding mares)

  • 조영재;이용덕;장종덕;신광휴;박용수;양재혁;김승준;조길재
    • 한국동물위생학회지
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    • 제38권1호
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    • pp.19-23
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    • 2015
  • This study was carried out to investigate the genital tract bacterial flora of riding mare in Jangsu stud farm during March to September, 2014. The specimens were collected from vaginal and uterus using a swab from 104 riding mares. Colonies were selected on blood and MacConkey agar plates, and identified as standard biochemical properties and Maldi-Tof MS. From this study, we isolated 148 strains including Escherichia (E.) coli (14.19%), Streptococcus (S.) equi subsp. zooepidemicus (2.7%), Streptococcus (S.) dysgalactiae subsp. equisimilis (2.03%), Klebsiella (K.) pneumonia (1.35%) and other strains from riding mares. In antimicrobial agents susceptibility test, it showed a high sensibility to the antibiotics of the most. E. coli and S. zooepidemicus were visible to have a high sensibility to almost antibiotics used in this study. However, K. pnemoniae showed a high antibiotic resistance patterns. These results may provide the basic information to establish strategies for the treatment and prevention of reproductive diseases in riding mares in Korea.

Characterization of Yersinia ruckeri isolated from the farm-cultured eel Anguilla japonica in Korea

  • Joh, Seong Joon;Kweon, Chang Hee;Kim, Min Jeong;Kang, Min Su;Jang, Hwan;Kwon, Jun Hun
    • 대한수의학회지
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    • 제50권1호
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    • pp.29-35
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    • 2010
  • Yersinia (Y.) ruckeri has been recognized as a serious bacterial pathogen to several kinds of fish, including rainbow trout. However, there are no reports about the characteristics and pathogenicity of Y. ruckeri isolated from farm-cultured eels. In this study, we isolated and characterized Y. ruckeri from the farm-cultured eel Anguilla japonica in Korea. We investigated the phenotypic and genotypic characteristics of Y. ruckeri and tested the virulence of Y. ruckeri isolates on experimentally infected eels. Examination of the flagellar morphology of Y. ruckeri by electron microscopy showed peritrichous flagella in its cell body. Biochemical reaction studies showed overall identical profiles between the isolates and the reference strain of Y. ruckeri in API 20E and API ZYM tests. We sequenced the 16S rRNA of the Y. ruckeri (1,505 bp) for the genotypic characterization (National Center for Biotechnology Information accession number EU401667). Comparison of the 16S rRNA sequences with previously reported Y. ruckeri strains revealed similar phylogenetic relationships. In the virulence assay of the Y. ruckeri on eels, the eels exhibited listlessness, but Y. ruckeri was reisolated from those of the gills and kidneys.

방사성핵종 복막촬영술을 이용한 복수에 동반된 수흉의 감별 진단 (Radionuclide Peritoneal Scintigraphy in Patients with Ascites and Pleural Effusion)

  • 이재태;이규보;황기석;김광원;정병천;조동규;정준모
    • 대한핵의학회지
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    • 제24권2호
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    • pp.279-285
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    • 1990
  • Simultaneous presence of ascites and pleural effusion has been documented in patients with cirrhosis of the liver, renal disease, Meigs' syndrome and in patients undergoing peritoneal dialysis. Mechanisms proposed in the formation of pleural effusion in most of the above diseases are lymphatic drainage and diaphragmatic defect. But sometimes, hepatic hydrothoraxes in the absence of clinical ascites and pleural effusion secondary to pulmonary or cardiac disease are noted. It is not always possible to differentiate between pleural effusion caused by transdiaphragmatic migration of ascites and by other causes based soly on biochemical analysis. Authors performed radionuclide scintigraphy after intraperitoneal administration of $^{99m}Tc-labeled$ colloid in 23 patients with both ascites and pleural effusion in order to discriminate causative mechanisms responsible for pleural effusion. Scintigraphy demonstrated the transdiaphragmatic flow of fluid from the peritoneum to pleural cavities in 13 patients correctly. In contrast, in 5 patients with pleural effusion secondary to pulmonary, pleural and cardiac diseases, radiotracers fail to traverse the diaphragm and localize in the pleural space. Ascites draining to mediastinal lymph nodes and blocked passage of lymphatic drainage were also clarified, additionaly. Conclusively, radionuclide peritoneal scintigraphy is an accurate, rapid and easy diagnostic tool in patients with both ascites and pleural effusion. It enables the causes of pleural effusion to be elucidated, as well as providing valuable information required when determining the appropriate therapy.

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입자 내 조성 변화가 수분산성 아크릴 에멀젼 점착제의 점착 물성과 수분산성에 미치는 영향 (Effects of Intra-particle Composition on the Adhesive Properties and Water Dispersity of Water Dispersible Acrylic Emulsion Pressure Sensitive Adhesive)

  • 서인선;이명천
    • 공업화학
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    • 제18권5호
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    • pp.444-448
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    • 2007
  • 수분산성 점착제의 점착 물성과 수분산성에 미치는 입자 내 조성의 영향을 알아보기 위하여 다양한 입자 내 조성을 갖는 아크릴계 에멀젼형 점착제를 제조하여 각각의 점착 물성과 수분산성을 조사하였다. 입자 내 단일 조성을 갖는 경우 유지력과 수분산성을 동시에 만족시키기 어려웠으나 입자 내 조성을 hard core/soft shell 형태를 갖게 함으로써 수분산성은 적게 희생하고 유지력을 높일 수 있었다. 또한 메타크릴산/아크릴산(MAA/AA)의 중량비가 4/1인 경우에는 친수성 물질인(AA+MAA) 함량이 core로 갈수록 많은 경우와 shell로 갈수록 많은 경우 모두 유지력은 크게 상승했으나 초기점착력은 크게 낮아졌으며 수분산성은 거의 관찰되지 않았다. 그러나 MAA/AA 중량비가 1/4인 경우는 shell 부분에 (AA+MAA) 함량이 많은 경우에 수분산성이 더 컸으나 유지력은 상대적으로 적게 나타났다.

변분 베이지안 혼합 인자 분석에 의한 분포 추정을 이용하는 진화 알고리즘 (Evolutionary Algorithms with Distribution Estimation by Variational Bayesian Mixtures of Factor Analyzers)

  • 조동연;장병탁
    • 한국정보과학회논문지:소프트웨어및응용
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    • 제32권11호
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    • pp.1071-1083
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    • 2005
  • 최근 들어 확률 분포를 개체군으로부터 추정하여 보다 효율적으로 최적화를 해결하려는 연구가 진행되고 있다. 특히 복잡한 문제의 해결을 위해서 혼합 분포가 사용되고 있다. 그러나 이 경우 몇 개의 성분으로 혼합 분포를 나타낼 것인가를 결정하기 어려운 문제가 있으며, 각 분포에 의하여 표현되는 이전 세대의 우수한 부분 해들을 잘 결합하지 못하는 단점이 있다. 본 논문에서는 변분 베이지안 혼합 인자 분석(variational Bayesian mixtures of factor analyzers) 기법을 사용한 개체군의 분포 추정을 통해 실수 공간에서의 최적화 문제를 해결하는 방법을 제안한다. 이 기법은 혼합 분포의 개수 추정을 자동화하며, 잠재 변수(latent variable)를 사용하여 각 분포가 표현하는 세부 개체군 내에 포함된 부분 해들의 혼합을 효율적으로 수행할 수 있다. 잘 알려진 함수 최적화 문제들에 대해 다른 분포 추정 진화 알고리즘과 비교하여 제안하는 방법의 우수성을 검증하였다. 또한 시스템 생물학에서 다루고 있는 생화학 네트워크의 동적 모델링을 위한 매개변수 추정도 성공적으로 수행하였다.

Review of Rice Quality under Various Growth and Storage Conditions and its Evaluation using Spectroscopic Technology

  • Joshi, Ritu;Mo, Changyeun;Lee, Wang-Hee;Lee, Seung Hyun;Cho, Byoung-Kwan
    • Journal of Biosystems Engineering
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    • 제40권2호
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    • pp.124-136
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    • 2015
  • Purpose: Grain quality is a general concept that covers many characteristics, ranging from physical to biochemical and physiochemical properties. Rice aging during storage is currently a challenge in the rice industry, and is a complicated process involving changes in all of the above properties. Spectroscopic techniques can be used to obtain information on the quality of rice samples in a non-destructive manner. Methods: The objective of this review was to highlight the factors that contribute to rice quality and aging, and to describe various spectroscopic modalities, particularly vibrational and hyperspectral imaging, for the assessment of rice quality. Results: Starch and protein are the main components of the rice endosperm, and are therefore key factors contributing to eating and cooking quality. While the overall starch, protein, and lipid content in the rice grain remains essentially unchanged during storage, structural changes do occur. These changes affect pasting and gel properties, and ultimately the flavor of cooked rice. In addition, grain quality is significantly affected by growing and environmental conditions, such as water availability, temperature, fertilizer application, and salinity stress. These properties can be evaluated using spectroscopic techniques, and rice samples can be discriminated by using multivariate statistical analysis methods. Conclusion: Hyperspectral imaging and vibrational spectroscopy techniques have good potential for determining rice quality properties in a non-invasive manner, i.e., not requiring the introduction of instruments into the rice grain.

Reverse dot hybridization 방법과 16S rRNA gene(16S rDNA)을 이용한 식품에서 식중독균의 탐색 (Using Reverse Dot Hybridization Method and 16S rRNA Gene (16S rDNA) for Identifying the Food Poisoning Microorganism in Foods)

  • 김민성;신규철;이형구;한명수;민병례;최영길
    • 한국식품과학회지
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    • 제35권3호
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    • pp.470-474
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    • 2003
  • 식중독은 세균에 의한 발병이 대부분이다. 따라서 식품에서 식중독 원인균을 신속하게 탐색하게 식중독으로부터의 되면 피해를 줄일 수 있을 것이다. 고전적인 식중독 원인균 탐색은 증균, 선택적 배지를 이용한 isolation, 생화학적 특징을 활용하는 분석이 있으나 많은 시간이 소요되는 단점을 갖고 있었다. 본 연구는 16S rRNA gene(16S rDNA)로부터 얻은 DNA 염기 서열을 이용 식중독 원인균의 특이적 oligonucleotide probe을 제작 reverse dot blot hybridization과 PCR 방법을 이용하여 고전적인 방법보다 빠른 시간 내에 식품에서 원인균을 탐색 할 수 있었다. 우유를 인공적으로 본 연구에서 사용한 균주로 오염시킨 후 DNA를 추출하여 PCR 증폭산물과 oligonucleotide probe를 hybridization 시킨 결과 oligonucleotide probe를 hybridization 시킨 결과 oligonucleotide probe가 위치한 곳에서 발색 반응이 나타났다. 본 연구에서 본 연구를 통해 DNA microchip으로 활용 짧은 시간 내에 많은 종류의 식중독 원인균을 탐색 할 수 있는 가능성을 확인하였다.

더러브렛 씨암말의 생식기내 세균의 분포 및 항생제 감수성 양상 (Distribution and Antimicrobial Susceptibility Patterns of Bacteria Isolated from Genital Tract in Thoroughbred Mares)

  • 최성균;이수길;양재혁;조길재
    • 한국임상수의학회지
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    • 제24권1호
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    • pp.19-25
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    • 2007
  • This study carried out to investigate the genital tract bacterial flora of Thoroughbred mare in Jeju province during March and July, 2006. The specimens were collected from vaginal ucosa and clitorial fossa using a culture swab (BBL, USA) from 100 Thoroughbred mares. Colonies were selected blood and MacConkey agar plate, and identified as standard biochemical properties using Biolog system (Thermo, USA). In this study, 470 gram-negative strains were isolated more frequently than 249 gram-positive strains. We were Isolated Escherichia coli (19.8%), Proteus mirabillis (14.9%), Enterobacter nimipressuralis (7.4%), Enterobacter mobilis (4.7%), Aeromonas encheleia (4.3%), Pseudomonas aeroginosa (3.0%), Staphylococcus aureus (14.9%), Staphylococcus epidermidis (11.2%), Coagulasenegative Staphylococcus spp. (10.0%), Enterococcus faecalis (9.2%), Enterococcus faecium (8.0%), Actinomyces viscosus (7.2%), Micoroccus diversus(6.8%), Streptococcus dysgalactiae subsp. equisimilis(5.2%), Streptococcus equi subsp. zooepidemicus (3.2%), Other non-beta hemolytic Streptococcus spp. (2.0%) and many others from vaginal mucosa and clitorial fossa in Thoroughbred mares. No significant bacteria (Taylorella equigenitalis and Klebsiella pneumonia) were isolated from the mare genital tract. In antimicrobial agents susceptibility test, it shows a high sensibility in the antibiotics of the most which excepts the streptomycin and neomycinm, kanamycin, spectinomycin, compound sulfonamides. Especially, Staphylococcus epidermidis, Enterococcus spp. and Streptococcus spp. were visible a high sensibility in the all antibiotics. However, Staphylococcus aureus, Pseudomonas aeruginosa, Proteus spp. and E. coli were showed a high antibiotic resistance patterns. These results may provide the basic information to establish strategies for the treatment and prevention of reproductive disease in Thoroughbred mares in Korea.

하천환경의 생물학적 평가를 위한 간이저서동물지수(SBMI)의 개발 (Development of Simple Benthic Macroinvertebrates Index (SBMI) for Biological Assessment on Stream Environment)

  • 공동수;민정기;노성유
    • 한국물환경학회지
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    • 제34권5호
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    • pp.514-536
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    • 2018
  • GPI (Group Pollution Index) using 29 indicator groups of Korean benthic macroinvertebrates was proposed in 1992, a higher category taxa-level index developed for rapid field assessment of organic water pollution. This study was performed to revise the assessment scheme of GPI based on taxonomic performance and ecological information accumulated since 1992. The original GPI was renamed SBMI (Simple Benthic Macroinvertebrates Index), and SBMI was based on saprobic valency of 26 indicator groups composed of higher category taxa (mainly family ~ phylum) excluding some genus or species-level taxa. SBMI revealed highly significant correlation with concentration of 5-day biochemical oxygen demand ($BOD_5$) (correlation coefficient r = 0.78, n = 569 sites), total suspended solids (r = 0.69), and total phosphorus (r = 0.77). Also, SBMI revealed strong correlation with Shannon-Weaver's species diversity (r = -0.85), Margalef's species richness (r = -0.85), and McNaughton's dominance (r = 0.83). Determination coefficient of SBMI to concentration of water quality items and values of community indices such as species diversity was 3 ~ 8 % and approximately 11 ~ 14 % higher than that of GPI, respectively. Correlation between SBMI and water quality factors or community indices such as species diversity did not reveal much difference compared to that of species-level indices, such as BMI (Benthic Macroinvertebrates Index) and ESB (Ecological Score of Benthic Macroinvertebrates). SMBI is a simple-qualitative index with higher category taxa easily identified, and is applicable for rapid field assessment of water environment impairment.

Effects of Au Nanoparticle Monolayer on or Under Graphene for Surface Enhanced Raman Scattering

  • Kim, B.Y.;Jung, J.H.;Sohn, I.Y.;Lee, N.E.
    • 한국진공학회:학술대회논문집
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    • 한국진공학회 2013년도 제44회 동계 정기학술대회 초록집
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    • pp.636-636
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    • 2013
  • Since first discovery of strong Raman spectrum of molecules adsorbed on rough noble metal, surface enhanced Raman scattering (SERS) has been widely used for detection of molecules with low concentration. Surface plasmons at noble metal can enhance Raman spectrum and using Au nanostructures as substrates of SERS has advantages due to it has chemical stability and biocompatibility. However, the photoluminescence (PL) background from Au remains a problem because of obtaining molecular vibration information. Recently, graphene, two-dimensional atomic layer of carbon atoms, is also well known as PL quenchers for electronic and vibrational excitation. In this study, we observed SERS of single layer graphene on or under monolayer of Au nanoparticles (NPs). Single layer graphene is grown by chemical vapor deposition and transferred onto or under the monolayer of Au NPs by using PMMA transfer method. Monolayer of Au NPs prepared using Langmuir-Blodgett method on or under graphene surface provides closed and well-packed monolayer of Au NPs. Scanning electron microscopy (SEM) and Raman spectroscopy (WItec, 532 nm) were performed in order to confirm effects of Au NPs on enhanced Raman spectrum. Highly enhanced Raman signal of graphene by Au NPs were observed due to many hot-spots at gap of closed well-packed Au NPs. The results showed that single layer graphene provides larger SERS effects compared to multilayer graphene and the enhancement of the G band was larger than that of 2D band. Moreover, we confirm the appearance of D band in this study that is not clear in normal Raman spectrum. In our study, D band appearance is ascribed to the SERS effect resulted from defects induced graphene on Au NPs. Monolayer film of Au NPs under the graphene provided more highly enhanced graphene Raman signal compared to that on the graphene. The Au NPs-graphene SERS substrate can be possibly applied to biochemical sensing applications requiring highly sensitive and selective assays.

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