• Animal Systematics, Evolution and Diversity
• /
• v.36 no.4
• /
• pp.296-303
• /
• 2020

Three species of the genus Dohrniphora, viz., D. cornuta, D. malaysiae, and D. prescherweberae were newly recorded from Korea. These newly recorded species can be easily identified by the characteristic that inner face of male hind femur equipped with a group of peg-like stout setae on basal sensory area. Peg-like setae are arranged perpendicularly in D. cornuta whereas linear in D. malaysiae and somewhat arched in D. prescherweberae. Also, concave area near the peg-like setae is also well developed in male which is smooth in D. cornuta, on the other hand, there is well developed distal carina in D. malaysiae and with groups of microtrichia in D. prescherweberae. In this study, detailed descriptions with photographs of three newly recorded species and a key to males of all Korean Dohrniphora species are provided.

• Animal Systematics, Evolution and Diversity
• /
• v.37 no.1
• /
• pp.1-8
• /
• 2021

A eunicid polychaete, Marphysa victori Lavesque, Daffe, Bonifácio & Hutchings, 2017 is described for the first time from the intertidal zones of the Korean coasts. It is characterized by having three types of pectinate chaetae (INS, isodont-narrow-slender; AWS, anodont-wide-slender; and AWT, anodont-wide-thick), appearance of pectinate chaetae from chaetiger 2, the chaetae consisted of pectinate and compound spinigers, and pygidium with one pair of pygidial cirri. In genetic analysis based on cytochrome c oxidase subunit I (COI), intra-specific genetic distance between the specimens of M. victori from its type locality, France and Korea are in the range of 0.000-0.013. This paper includes the morphological description and photographs of M. victori new to Korean fauna, with partial sequences of the mitochondrial COI as DNA barcode data on this species.

• Animal Systematics, Evolution and Diversity
• /
• v.38 no.2
• /
• pp.65-68
• /
• 2022

The subgenus Abstrulia Casey belonging to the genus Tetratoma Fabricius of the family Tetratomidae is distributed ten species over the Holarctic region, including eight Palaearctic species. In East Asia, four species from Russian Far East and two species from Japan have been recorded, respectively. In the Korean Peninsula, two species, T. (A.) ainu (Nakane) and T. (A.) pictipennis Reitter, were reported up to date, and latter species is newly recorded in South Korea in this paper. A redescription, habitus photograph, and illustrations of diagnostic characters of the species are provided, with a key to species of the subgenus Abstrulia.

• Animal Systematics, Evolution and Diversity
• /
• v.39 no.3
• /
• pp.118-122
• /
• 2023

The genus Hydroporus Clairville is the most diverse group belonging to the subfamily Hydroporinae in the family Dytiscidae. However, members of this group have not been recorded in the Korean peninsula. The genus Hydroporus Clairville is characterized by the following features: body glabrous to distinctly setose; elytra and ventral surface mainly piceous to black; epipleuron lacking a carina on humeral angle; metacoxal process conjointly with hind margin straight or slightly angulate medially. We collected the high mountain wetland and identified the species of Hydroporus uenoi Nakane based on male genitalia for the first time. A habitus photo, a redescription, mitochondrial DNA sequence, illustrations of the aedeagus of species, and habitat information are provided.

• Animal Systematics, Evolution and Diversity
• /
• v.39 no.4
• /
• pp.300-303
• /
• 2023

The family Ciidae, commonly known as minute tree-fungus beetles, encompasses approximately 640 species distributed among 43 genera, classified into two subfamilies(Ciinae and Sphidociinae). In South Korea, total 13 species in five genera are known: Cis boleti(Scopoli), C. hieroglyphicus Reitter, C. jezoensis Nobuchi, C. mikagensis Nobuchi & Wada, C. sasajii Kawanabe, C. seriatopilosus Motschulsky, Ennearthron chujoi Nakane & Nobuchi, E. ishiharai Miyatake, E. robusticorne Kawanabe, Neoennearthron bicarinatum Miyatake, Octotemnus japonicus Miyatake, O. laminifrons (Motschulsky), and Xylographus scheerpeltzi Nobuchi. In this study, two Ciidae species, Cis japonicus Nobuchi, 1955 and Orthocis nigrosplendidus(Nobuchi, 1955), are reported for the first time in the Korean Peninsula. Diagnoses of two species, habitus photographs of adult and male genitalia are provided.

• Proceedings of the Korean Society of Plant Pathology Conference
• /
• 2003.10a
• /
• pp.120.2-120
• /
• 2003

Agrobacterium vitis is a causal agent of crown-gall disease on grapevine. In Korea, grapevine variety (GeoBong) have severely been infected by the bacteria since stems of the variety were buried in soil for overwintering. Infection ratio over 70-80％ was observed on 7 years old GeoBong grapevine in Ansung and Cheonan. PCR specific primers for A. vitis strains were designed using nucleotide sequences of vir A gene in Ti-Plasmid, pheA gene in chromosomal DNA and a URP-PCR polymorphic band. Three hundred bacterial strains were isolated from the different 80 galls formed on GeoBong grapevine in Cheonan and Ansung of Korea and were screened to identify A. vitis using the three specific PCR primers for Agrobacterium vitis. Twenty-four bacterial strains that are detected by the primers were further confirmed by pathogenicity and biochemical methods. To investigate the genomic diversity of the bacterial strains, twenty primers of 20 mer referred to universal rice primers (URP) were applied for PCR fingerprinting, Of them, URP2R and URP2F primers could effectively be used to detect polymorphism within the bacterial strains.

• Journal of Species Research
• /
• v.7 no.2
• /
• pp.151-160
• /
• 2018

Seven bacterial strains, 15J4M-1, 15J13-8, 16MFM10, 15J1-8, SR1-5-4, 15J13-6, and 15J8-11 assigned to the phylum Actinobacteria, Bacteroidetes, and Firmicutes were isolated from soil samples collected from Jeju, Korea. Phylogenetic analysis based on 16S rRNA gene sequence revealed that strains 15J4M-1, 15J13-8, 16MFM10, 15J1-8, SR1-5-4, 15J13-6, and 15J8-11 were most closely related to Bacillus selenatarsenatis $SF-1^T$ (with 99.4% similarity), Brevibacterium luteolum $CF87^T$ (99.5%), Carnobacterium iners CCUG $62000^T$ (99.6%), Exiguobacterium profundum $10C^T$ (99.3%), Larkinella insperata LMG $22510^T$ (99.3%), Pseudokineococcus lusitanus CECT $7306^T$ (99.4%), and Spirosoma endophyticum $EX36^T$ (99.3%), respectively. This is the first report of these seven species in Korea.

• Journal of Species Research
• /
• v.9 no.3
• /
• pp.204-209
• /
• 2020

In 2019, as a subset study to discover indigenous yeast species in Korea, a total of 20 yeast species were isolated from soil samples collected in Pochoen-si. Among them, eight strains were unreported species. From the high 26S rRNA gene sequence similarity and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged to independent and predefined yeast species. The 20 strains were assigned to the genera Aureobasidium (1 strain) and Meyerozyma (1 strain) of the phylum Ascomycota and Cystofilobasidium (2 strains), Filobasidium (1 strain), Naganishia (2 strains), Bullera (3 strains), Leucosporidium (9 strains) and Sampaiozyma (1 strain) of the phylum Basidiomycota. There is no official report of the following species in Korea: Leucosporidium creatinivorum (4 strains), Leucosporidium escuderoi(2 strains), Leucosporidium golubevii(1 strain) and Leucosporidium intermedium (2 strains). Basic biochemical characteristics, colony and cell morphology are also described in the species description section.

• Genomics & Informatics
• /
• v.3 no.2
• /
• pp.47-51
• /
• 2005

Molecular mechanisms of biological processes are typically represented as 'pathways' that have a graph­analogical network structure. However, due to the diversity of topics that pathways cover, their constituent biological entities are highly diverse and the semantics is embedded implicitly. The kinds of interactions that connect biological entities are likewise diverse. Consequently, how to model or process pathway data is not a trivial issue. In this review article, we give an overview of the challenges in pathway database development by taking the INOH project as an example.

• Korean Journal of Veterinary Research
• /
• v.42 no.4
• /
• pp.513-522
• /
• 2002

Antigenic ompC genes of S. gallinarum, S. pullorum and S. dublin were characterized among Salmonella spp. isolated from chickens and other animals to identify genetic variation. Salmonella ompC gene fragment (1,027 bp) was amplified by PCR and the amplicons were cloned for comparison of nucleotide sequences. The identity of the sequences between S. gallinarum and S. pullorum, S. gallinarum and S. dublin, S. pullorum and S. dublin was 99.8%, 97.6% and 97.8%, respectively. Also, we found that ompC has some diversity between S. gallinarum and S. pullorum, and other Salmonella spp. which may be useful to type the organisms. Similar to diagnosis in other organisms, the TaqMan PCR method can be applied to rapid and accurate diagnosis of salmonellosis in chickens and other animals. We designed PCR primers and TaqMan probe for flagellin gene (fliC) for detection of Salmonella spp. by TaqMan PCR. The TaqMan PCR method was 10,000 times more sensitive than conventional PCR.