• Title/Summary/Keyword: Bio-Data

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Design of u-Health service platform (모바일 u-health 서비스 플랫폼 설계)

  • Min, Byoung-won;Oh, Yong-sun;Han, Dong-soo;Koo, Jong-young
    • Proceedings of the Korea Contents Association Conference
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    • 2009.05a
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    • pp.797-801
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    • 2009
  • In the proposed u-health service platform mobile u-health served an a series of process of bio data collection and storage and bio data analyses and results notice, and I interpreted it to a process. I became a design so as the service platform which supported health management system construction easily loaded service applied mobile u-health, and to be able to operate it in mobile environments, and took utility of a service platform and usability into consideration, and I got the crux of u-health use service.

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ENCODE: A Sourcebook of Epigenomes and Chromatin Language

  • Yavartanoo, Maryam;Choi, Jung Kyoon
    • Genomics & Informatics
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    • v.11 no.1
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    • pp.2-6
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    • 2013
  • Until recently, since the Human Genome Project, the general view has been that the majority of the human genome is composed of junk DNA and has little or no selective advantage to the organism. Now we know that this conclusion is an oversimplification. In April 2003, the National Human Genome Research Institute (NHGRI) launched an international research consortium called Encyclopedia of DNA Elements (ENCODE) to uncover non-coding functional elements in the human genome. The result of this project has identified a set of new DNA regulatory elements, based on novel relationships among chromatin accessibility, histone modifications, nucleosome positioning, DNA methylation, transcription, and the occupancy of sequence-specific factors. The project gives us new insights into the organization and regulation of the human genome and epigenome. Here, we sought to summarize particular aspects of the ENCODE project and highlight the features and data that have recently been released. At the end of this review, we have summarized a case study we conducted using the ENCODE epigenome data.

Protein subcellular localization classification from multiple subsets of amino acid pair compositions

  • Tung, Thai Quang;Lim, Jong-Tae;Lee, Kwang-Hyung;Lee, Do-Heon
    • Proceedings of the Korean Society for Bioinformatics Conference
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    • 2004.11a
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    • pp.101-106
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    • 2004
  • Subcellular localization is a key functional char acteristic of proteins. With the number of sequences entering databanks rapidly increasing, the importance of developing a powerful tool to identify protein subcellular location has become self-evident. In this paper, we introduce a novel method for predic ting protein subcellular locations from protein sequences. The main idea was motivated from the observation that amino acid pair composition data is redundant. By classifying from multiple feature subsets and using many kinds of amino acid pair composition s, we forced the classifiers to make uncorrelated errors. Therefore when we combined the predictors using a voting scheme, the prediction accuracy c ould be improved. Experiment was conducted on several data sets and significant improvement has been achieve d in a jackknife test.

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Development of a transcutaneous system for implantable bio-signal measurement (생체신호계측을 위한 체내 이식형 무선송수신 시스템 개발)

  • Lee, Seung-Ha
    • Journal of Sensor Science and Technology
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    • v.17 no.1
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    • pp.23-28
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    • 2008
  • In order to measure bio-signals, it is desirable to build a fully implantable system which connects directly to neural pathways or body tissue. A design scheme for fully implementable measurement system is proposed in this paper. Consisting of an implanted module and an external system, the proposed scheme delivers power and data between the two modules. The external module sends power via inductive link using a simple H-bridge type oscillator. Also, the implanted module sends measured data to the external system utilizing R/F communication technique at a frequency of ISM band. A stable communication and operation is achieved as the two types of channels are separated. Implemented in a compact size enough to be implanted in human body, the system exhibits good performance in experimental studies.

Graphiumins I and J, New Thiodiketopiperazines from the Marine-derived Fungus Graphium sp. OPMF00224

  • Fukuda, Takashi;Nagai, Kenichiro;Kurihara, Yuko;Kanamoto, Akihiko;Tomoda, Hiroshi
    • Natural Product Sciences
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    • v.21 no.4
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    • pp.255-260
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    • 2015
  • Two new thiodiketopiperazines (TDKPs), designated graphiumins I (1) and J (2), were isolated from the culture broth of the marine-derived fungus Graphium sp. OPMF00224 by solvent extraction, silica gel column chromatography, and HPLC. Their absolute structures were elucidated by spectroscopic analyses (1D and 2D NMR data, ROESY correlations, and CD data) and chemical methods. They were found to be structurally rare TDKPs with a phenylalanine-derived indolin substructure. Compounds 1 and 2 inhibited yellow pigment production by methicillin-resistant Staphylococcus aureus (MRSA) with $IC_{50}$ values of 63.5 and $76.5{\mu}g/ml$, respectively, without inhibiting its growth, even at $250{\mu}g/ml$.

Development of a Supporting System for Nutrient Solution Management in Hydroponics - II. Estimation of Electrical Conductivity(EC) using Neural Networks (양액재배를 위한 배양액관리 지원시스템의 개발 - II. 신경회로망에 의한 전기전도도(EC)의 추정)

  • 손정익;김문기;남상운
    • Journal of Bio-Environment Control
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    • v.1 no.2
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    • pp.162-168
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    • 1992
  • As the automation of nutrient solution management proceeds in the field of hydroponics, effective supporting systems to manage the nutrient solution by computer become needed. This study was attempt to predict the EC of nutrient solution using the neural networks. The multilayer perceptron consisting of 3 layers with the back propagation learning algorithm was selected for EC prediction, of which nine variables in the input layer were the concentrations of each ion and one variable in the output layer the EC of nutrient solution. The meq unit in ion concentration was selected fir input variable in the input layer. After the 10,000 learning sweeps with 108 sample data, the comparison of predicted and measured ECs for 72 test data showed good agreements with the correlation coefficient of 0.998. In addition, the predicted ECs by neural network showed relatively equal or closer to the measured ones than those by current complicated models.

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PSPICE Modeling of Commercial ICs for Switch-Mode Power Supply (SMPS) Design and Simulation

  • Yi, Yun-Jae;Yu, Yun-Seop
    • Journal of information and communication convergence engineering
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    • v.9 no.1
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    • pp.74-77
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    • 2011
  • PSPICE modeling of a commercial LED driver IC (TOP245P) and PC817A optocoupler is proposed for the switch-mode power supply (SMPS) (applicable to LED driver) design and simulation. An analog behavioral model of the TOP245P IC including the shunt regulator, under-voltage(UV) detection, over-voltage(OV) shut-down and SR flip-flop is developed by using PSPICE. The empirical equation of PC817A current transfer ratio (CTR) is fitted from the datasheet of PC817A. Two types of SMPSs are simulated with the averaged-model and switching-model. The simulation results by the proposed PSPICE models are in good agreement with those in the data sheet and an experimental data.

A study on energy consumption predictive modeling using public data (공공 데이터를 이용한 에너지 소비 예측 모델링에 관한 연구)

  • Park, Koo-Rack;Jung, Jin-Young;Ahn, Woo-Young;Chung, Young-Suk
    • Proceedings of the Korean Society of Computer Information Conference
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    • 2012.07a
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    • pp.329-330
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    • 2012
  • 인터넷과 웹의 발전으로 수많은 정보가 발생하고 있으며, 공공기간도 많은 정보를 축적하고 있다. 이에 각 국에서는 공공기간이 보유하는 데이터를 공개하고 있으며 우리나라도 통계청을 중심으로 다양한 데이터를 공개하고 있다. 그러나 공개된 자료의 활용도가 낮은 편이다. 본 논문에서는 공개된 공공데이터 중 에너지 소비 데이터를 활용하고자 한다. 에너지 소비 데이터를 미래 예측 연구에 많이 이용되고 있는 마코프 프로세스를 적용하여, 에너지 소비를 예측할 수 있는 모델링을 제안하고, 그 기대 효과에 대해 논의 한다.

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The First Record of the Marphysa victori (Polychaeta, Eunicida, Eunicidae) from Korea, with DNA Barcode Data

  • Kim, Hana;Kim, Keun-Yong;Phoo, War War;Kim, Chang-Hoon
    • Animal Systematics, Evolution and Diversity
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    • v.37 no.1
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    • pp.1-8
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    • 2021
  • A eunicid polychaete, Marphysa victori Lavesque, Daffe, Bonifácio & Hutchings, 2017 is described for the first time from the intertidal zones of the Korean coasts. It is characterized by having three types of pectinate chaetae (INS, isodont-narrow-slender; AWS, anodont-wide-slender; and AWT, anodont-wide-thick), appearance of pectinate chaetae from chaetiger 2, the chaetae consisted of pectinate and compound spinigers, and pygidium with one pair of pygidial cirri. In genetic analysis based on cytochrome c oxidase subunit I (COI), intra-specific genetic distance between the specimens of M. victori from its type locality, France and Korea are in the range of 0.000-0.013. This paper includes the morphological description and photographs of M. victori new to Korean fauna, with partial sequences of the mitochondrial COI as DNA barcode data on this species.

Analysis of Bioclimatic Variables in Mt. Geumo Region Adjacent to Keimyung Dongyeong Forest (현장 관측 자료를 이용한 금오산 계명대학교 동영학술림 부근의 생물기후환경 분석)

  • Ha-Young Kim;Soo-Jin Park;Hae-Dong Kim
    • Journal of Environmental Science International
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    • v.32 no.5
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    • pp.365-374
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    • 2023
  • Eight years (2014-2021) of climate data were collected from an automatic weather observation system installed at the foot of Mt. Geumo in Chilgok, Gyeongbuk. Using these data, we investigated local bio-climatological indices (warmth index, WI; coldness index, CI; and effective accumulated temperature, EAT) of the mountain region adjacent to the Keimyung Dongyeong forest. The study area's WI and CI were 109.3℃ and -11.3℃ per month, respectively, averaged across 8 years. These values are indicative of an evergreen broad-leaved forest in the warm temperate climate zone, suitable for cultivating sweet persimmons and figs. Additionally, EAT in Dongyeong was 2,113.7℃, averaged across 8 years, suitable for growing crops such as corn, soybean, and potato.