• Title/Summary/Keyword: Base-resolution analysis

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Molecular Differentiation of Schistosoma japonicum and Schistosoma mekongi by Real-Time PCR with High Resolution Melting Analysis

  • Kongklieng, Amornmas;Kaewkong, Worasak;Intapan, Pewpan M.;Sanpool, Oranuch;Janwan, Penchom;Thanchomnang, Tongjit;Lulitanond, Viraphong;Sri-Aroon, Pusadee;Limpanont, Yanin;Maleewong, Wanchai
    • Parasites, Hosts and Diseases
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    • v.51 no.6
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    • pp.651-656
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    • 2013
  • Human schistosomiasis caused by Schistosoma japonicum and Schistosoma mekongi is a chronic and debilitating helminthic disease still prevalent in several countries of Asia. Due to morphological similarities of cercariae and eggs of these 2 species, microscopic differentiation is difficult. High resolution melting (HRM) real-time PCR is developed as an alternative tool for the detection and differentiation of these 2 species. A primer pair was designed for targeting the 18S ribosomal RNA gene to generate PCR products of 156 base pairs for both species. The melting points of S. japonicum and S. mekongi PCR products were $84.5{\pm}0.07^{\circ}C$ and $85.7{\pm}0.07^{\circ}C$, respectively. The method permits amplification from a single cercaria or an egg. The HRM real-time PCR is a rapid and simple tool for differentiation of S. japonicum and S. mekongi in the intermediate and final hosts.

Selection of Scalable Video Coding Layer Considering the Required Peak Signal to Noise Ratio and Amount of Received Video Data in Wireless Networks (무선 네트워크에서 요구되는 평균 최대 신호 대 잡음비와 수신 비디오 데이터양을 고려하는 스케일러블 비디오 코딩 계층 선택)

  • Lee, Hyun-No;Kim, Dong-Hoi
    • Journal of Digital Contents Society
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    • v.17 no.2
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    • pp.89-96
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    • 2016
  • SVC(Scalable Video Coding), which is one form among video encoding technologies, makes video streaming with the various frame rate, resolution, and video quality by combining three different scalability dimensions: temporal, spatial, and video quality scalability. As the above SVC-encoded video streaming consists of one base layer and several enhancement layers, and a wireless AP(Access Point) chooses and sends a suitable layer according to the received power from the receiving terminals in the changeable wireless network environment, the receiving terminals supporting SVC are able to receive video streaming with the appropriate resolution and quality according to their received powers. In this paper, after the performance analysis for the received power, packet loss rate, PSNR(Required Peak Signal to Noise Ratio), video quality level and amount of received video data based on the number of SVC layers was performed, an efficient method for selecting the number of SVC layer satisfying the RSNR and minimizing the amount of received video data is proposed.

Modeling of Inductive Position Sensor and its Analysis (유도형 변위 센서의 모델링 및 해석)

  • 신우철;홍준희;이동주
    • Proceedings of the Korean Society of Precision Engineering Conference
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    • 1997.10a
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    • pp.249-252
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    • 1997
  • The resolution of analog sensor is determined by its sensitivity and amplitude of noise. This paper presents modeling of inductive gap sensor base on equivalent magnetic circuit and analysis of sensitivity. The model of inductive gap sensor is verified by the experimental results. Then we can simulate static characteristic of inductive gap sensor using this model. Computer simulation show that sensor's sensitivity and linearity are affected by magnetic flux's leakage and fringing, and that they are affected by shape of sensor probe.

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The SNP of WBP1 is associated with heifer reproductive performance in the Korean native cattle Hanwoo

  • Jeong, Jiyeon;Lee, Seung-Hwan;Choi, Inchul
    • Korean Journal of Agricultural Science
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    • v.46 no.1
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    • pp.27-31
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    • 2019
  • It is well documented that intensive selection in dairy cattle for economic value such as increased milk yield led to a decline in reproductive performance. Recent studies using genome-wide association studies (GWASs) discovered candidate genes involved in the lower fertility including embryo development and conception rates. However, the information, which showed a lower reproductive performance, is limited to dairy cattle, especially Holstein, and the candidate genes were not examined in the Korean native cattle Hanwoo which has been intensively selected and bred for meat in the last few decades. We selected the candidate genes WBP1 and PARM1 reported to be associated with cow and/or heifer conception in dairy cattle and analyzed the genotype because those genes have non-synonymous single nucleotide polymorphisms (SNPs). To determine the single base change, we used the high resolution melting (HRM) assay which is rapid and cost-effective for a small number of genes. We found that most heifers with higher conception (1: service per conception) have the AA genotype coding Threonine rather than Proline in the WBP1 gene. We did not detect an association for a SNP in PARM1 in our analysis. In conclusion, the genetic variation of WBP1 can be used as a selective marker gene to improve reproductive performance, and HRM assay can be used to identify common SNP genotypes rapidly and cost effectively.

Prediction of Asphalt Pavement Service Life using Deep Learning (딥러닝을 활용한 일반국도 아스팔트포장의 공용수명 예측)

  • Choi, Seunghyun;Do, Myungsik
    • International Journal of Highway Engineering
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    • v.20 no.2
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    • pp.57-65
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    • 2018
  • PURPOSES : The study aims to predict the service life of national highway asphalt pavements through deep learning methods by using maintenance history data of the National Highway Pavement Management System. METHODS : For the configuration of a deep learning network, this study used Tensorflow 1.5, an open source program which has excellent usability among deep learning frameworks. For the analysis, nine variables of cumulative annual average daily traffic, cumulative equivalent single axle loads, maintenance layer, surface, base, subbase, anti-frost layer, structural number of pavement, and region were selected as input data, while service life was chosen to construct the input layer and output layers as output data. Additionally, for scenario analysis, in this study, a model was formed with four different numbers of 1, 2, 4, and 8 hidden layers and a simulation analysis was performed according to the applicability of the over fitting resolution algorithm. RESULTS : The results of the analysis have shown that regardless of the number of hidden layers, when an over fitting resolution algorithm, such as dropout, is applied, the prediction capability is improved as the coefficient of determination ($R^2$) of the test data increases. Furthermore, the result of the sensitivity analysis of the applicability of region variables demonstrates that estimating service life requires sufficient consideration of regional characteristics as $R^2$ had a maximum of between 0.73 and 0.84, when regional variables where taken into consideration. CONCLUSIONS : As a result, this study proposes that it is possible to precisely predict the service life of national highway pavement sections with the consideration of traffic, pavement thickness, and regional factors and concludes that the use of the prediction of service life is fundamental data in decision making within pavement management systems.

An Imbedded System for Time Synchronization in Distributed Environment based on the Internet (인터넷 기반 분산 환경에서 시각 동기를 위한 임베디드 시스템)

  • Hwang So-Young;Yu Dong-Hui;Li Ki-Joune
    • Journal of KIISE:Computing Practices and Letters
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    • v.11 no.3
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    • pp.216-223
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    • 2005
  • A computer clock has limits in accuracy and precision affected by its inherent instability, the environment elements, the modification of users, and errors of the system. So the computer clock needs to be synchronized with a standard clock if the computer system requires the precise time processing. The purpose of synchronizing clocks is to provide a global time base throughout a distributed system. Once this time base exists, transactions among members of distributed system can be controlled based on time. This paper discusses the integrated approach to clock synchronization. An embedded system is considered for time synchronization based on the GPS(Global Positioning System) referenced time distribution model. The system uses GPS as standard reference time source and offers UTC(Universal Time Coordinated) through NTP(Network Time Protocol). A clock model is designed and adapted to keep stable time and to provide accurate standard time with precise resolution. Private MIB(Management Information Base) is defined for network management. Implementation results and performance analysis are also presented.

3-D gravity terrain inversion for high resolution gravity data analysis

  • Lee Heuisoon;Park Gye-Soon;Kwon Byung-Doo;Oh Seok Hoon;Yang Junmo
    • 한국지구물리탐사학회:학술대회논문집
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    • 2003.11a
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    • pp.379-382
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    • 2003
  • In gravity data correction process, mass effect of the upper part of base level is removed with Bouguer density. Usually, Bouguer density is estimated as a mean density in the field area. But, this may causes a serious problem when ore body is in the area. To overcome this problem, we tried to apply a new method mixing up mass corrections and inversion (3DGTI). 3-D Gravity Terrain Inversion (3DGTI) includes information of topography and distribution of Bouguer density. For this method does not remove the mass effect above base level, it is no longer useless to use Bouguer density. Numerical model tests have shown that the 3DGIT successfully retrieves the anomalous subsurface density distribution of both surface and deeper layers. Model tests shows that this method shows better results than those of conventional one, especially when main target is ore body. The inversion result well delineates the three-dimensional shape of the intruded granite body and basement.

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Adsorption Selectivities between Hydroxypyridine and Pyridone Adsorbed on the Ge(100) Surface: Conjugation and Geometric Configuration Effects on Adsorption Structures

  • Kim, Minkyung;Lee, Myungjin;Lee, Hangil
    • Bulletin of the Korean Chemical Society
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    • v.35 no.2
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    • pp.581-586
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    • 2014
  • The most stable adsorption structures and their corresponding energies of 4-pyridone, 4-hydroxypyridine, 2-pyridone and 2-hydroxypyridine have been investigated by Density Functional Theory (DFT) calculation and high-resolution photoemission spectroscopy (HRPES). We confirmed that between the two reaction centers of 4- and 2-pyridone, only O atom of carbonyl functional group can act as a Lewis base while both the two reaction centers of 4- and 2-hydroxypyridine (tautomers of 4- and 2-pyridone) can successfully function as a Lewis base. On the other hand, owing to their molecular structures, there is a remarkable difference between the adsorption structures of 4- and 2-hydroxypyridine. Through the analysis of the N 1s and O 1s core level spectra obtained using HRPES, we also could corroborate that two different adducts coexist on the surface at room temperature due to their activation energy investigating the coverage dependent variation of bonding configurations when these molecules are adsorbed on the Ge(100) surface.

Text Mining Analysis on the Research Field of the Coastal and Ocean Engineering Based on the SCOPUS Bibliographic Information (해안해양공학 연구 분야의 SCOPUS 서지정보 Text Mining 분석)

  • Lee, Gi Seop;Cho, Hong Yeon;Han, Jae Rim
    • Journal of Korean Society of Coastal and Ocean Engineers
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    • v.30 no.1
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    • pp.19-28
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    • 2018
  • Numerous research papers have been accumulated due to the development and computerization of bibliometrics. This made it difficult to review all of the related papers published worldwide to conduct the study. However, due to the development of Natural language processing techniques, the tendency analysis of published research papers has become easier. In this study, text mining analysis using the statistical computing language R was carried out based on the bibliographic information of SCOPUS DB (Data Base) in the field of coastal and ocean engineering. As expected, the term 'wave' predominates, and it was confirmed that numerical analysis and hydraulic experiments were still dominant from the terms 'numerical model', 'numerical simulation', and 'experimental study'. In addition, recent use of the term 'wave energy' related to marine energy has been recognized. On the other hand, it was quantitatively confirmed that the frequency of connection between 'wave', and 'height' or 'energy' prevailed, and suggested the possibility of high resolution analysis by detailed field and period in the future.

The Resolution Effects of the Satellite images on the Interpretability of Geographic Informations - Laying Emphasis on the Interpretability and the Fractal Dimension (위성영상의 해상력에 따른 지리정보의 판독 - 판독가능성과 프랙탈 차원을 중심으로)

  • Kim, Yong-Il;Seo, Byoung-Jun;Ku, Bon-Chul
    • Journal of Korean Society for Geospatial Information Science
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    • v.8 no.2 s.16
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    • pp.61-69
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    • 2000
  • Until now, the extraction of information on geographic features and the compilation of maps from satellite imagery has had many limitations because of its lower resolution compared to aerial photos to the recent. However, it is expected that the availability of high resolution satellite imagery whose spatial resolution is about 1m will reduce such limitations. Currently, a compilation of national-wide digital base maps is going on to construct the National Geographic Information Systems in Korea. It will be used for many application field of the social welfare. Therefore, in this study, we suggest that satellite imagery can help it and we have experimented on the possibility of detecting and interpreting geographic data using satellite imagery of various spatial resolutions. The interpretability and detectability of 46 features in 6 categories was experimented with 6 kinds of images of different resolutions. As a subsequent procedure, we have performed the fractal analysis for a quality test of the texture information. Through the fractal analysis, we could show that texture information and probability of discrimination increases as the spatial resolution of the image increases. Based on the results of this experiment, we could suggest the possibility of the renewal and construction of the National-wide Geographic Information Systems database using satellite imagery, as well as of examining appropriate spatial resolutions for objects of interest.

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