• Title/Summary/Keyword: Bacillus spp

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Monitoring the Ecology of Bacillus During Daqu Incubation, a Fermentation Starter, Using Culture-Dependent and Culture-Independent Methods

  • Yan, Zheng;Zheng, Xiao-Wei;Han, Bei-Zhong;Han, Jian-Shu;Nout, M.J. Robert;Chen, Jing-Yu
    • Journal of Microbiology and Biotechnology
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    • v.23 no.5
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    • pp.614-622
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    • 2013
  • Daqu, a traditional fermentation starter, has been used to produce attractively flavored foods such as vinegar and Chinese liquor for thousands of years. Although Bacillus spp. are one of the dominant microorganisms in Daqu, more precise information is needed to reveal why and how Bacillus became dominant in Daqu, and next, to assess the impact of Bacillus sp. on Daqu and its derived products. We combined culture-dependent and culture-independent methods to study the ecology of Bacillus during Daqu incubation. Throughout the incubation, 67 presumptive Bacillus spp. isolates were obtained, 52 of which were confirmed by 16S rDNA sequencing. The identified organisms belonged to 8 Bacillus species: B. licheniformis, B. subtilis, B. amyloliquefaciens, B. cereus, B. circulans, B. megaterium, B. pumilus, and B. anthracis. A primer set specific for Bacillus and related genera was used in a selective PCR study, followed by a nested DGGE PCR targeting the V9 region of the 16S rDNA. Species identified from the PCR-DGGE fingerprints were related to B. licheniformis, B. subtilis, B. amyloliquefaciens, B. pumilus, B. benzoevorans, and B. foraminis. The predominant species was found to be B. licheniformis. Certain B. licheniformis strains exhibited potent antimicrobial activities. The greatest species diversity occurred at the Liangmei stage of Daqu incubation. To date, we lack sufficient knowledge of Bacillus distribution in Daqu. Elucidating the ecology of Bacillus during Daqu incubation would enable the impact of Bacillus on Daqu to be accessed, and the quality and stabilization of Daqu-derived products to be optimized.

Distribution of Microorganisms in Domestic Museum Environments (국내 박물과 환경에 분포하는 미생물의 분리)

  • Lee Sang-Joon;Lee Jae-Dong;Cha Mi-Sun;Lee Na-Eun;Yoon Soo-Jeong;Cho Hyun-Hok;Kwon Young-Suk
    • Journal of Environmental Science International
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    • v.14 no.8
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    • pp.793-800
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    • 2005
  • We isolated and identified microorganisms from the aerial environment of domestic museums. The fungi, Penicillium spp., Alternaria spp., and Cladosporium spp. were isolated in many museums. It seems that these fungi are related to biological degradation of textile remains. A total of 14 kinds of bacterial strains were isolated: Acinetobacter spp., Pseudomonas spp., Neisseria spp., Alcaligenes spp., Shigella spp., Klebsiella spp., Corynebacterium spp., Aerococcus spp., Bacillus spp., Micrococcus spp., Citrobacter spp., Erwinia spp., Salmonella spp., and Providencia spp. Acinetobacter spp., Pseudomonas spp., Neisseria spp., and Alcaligenes spp. were the predominate bacteria found in samples with a variety of bacteria. This suggests that there is a relationship between bacteria and the damage of textile remains. In the museum, we isolated Alternaria spp, Geotrichum spp., Penicillium spp. Acinetobacter spp., Pseudomonas spp., Alcaligenes spp. from the entrance, exhibit hall and storage, but they were found in smaller number and species in the exhibit cases and paulownia cases. We concluded that paulownia cases were not influenced by the microorganisms because of quality of care provided by the museum staff. Corynebacterium spp., and Bacillus spp. were not detected at the entrance and exhibit hall but were detected in paulownia cases. It is presumed that those bacteria did not flow in from outside, but resulted from contaminants in paulownia cases. In the distribution of microorganisms associated with textile remains, more fungi were detected than bacteria. Acinetobacter spp., Pseudomonas spp., and Neisseria spp., were isolated from silk items. Penicillium spp. and Cladosporium spp. were isolated in the silk and hump items. Aspergillus spp. and Penicillium spp. were isolated from the cotton items. On the other hands, there were no fungi strains in the wool items. Most of the isolated strains from textile remains were aerial microorganisms from the museum environment. These results suggest that textile remains were apt to contaminated by contact with the air.

Identification of Spoilage Bacteria Isolated from Aseptic Packaged Cooked Rice and Application of Acidic Electrolyzed Saline Solution as Water-for-Cooked Rice (무균포장밥으로부터 분리된 부패 미생물의 동정 및 전해산화수의 취반수로서의 이용 효과)

  • Jeong, Jeong-Hwan;Han, Seon-Jin;Cho, Won-Dae;Hwang, Han-Joon
    • Korean Journal of Food Science and Technology
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    • v.31 no.3
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    • pp.788-793
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    • 1999
  • In this study, it was investigated that the isolation and identification of spoilage bacteria from contaminated aseptic packaged cooked rice, the potential for application of acidic electrolyzed saline solution (AESS) as water-for-cooked rice and the microbiological safety of AESS-based cooked rice. Five strains of Bacillus subtilis and a B. cereus strain among the total six isolates were partially identified by biochemical method and by Microbial Identification System (MIS). The bactericidal effect of AESS was similar as 0.1% NaOCl and 70% ethanol solution, or better than that. All of the test microorganisms except Bacillus spp. that were exposed to AESS for five seconds were destructed. The effect of AESS against Bacillus spp. was much better than that of the two solutions and all of them were destructed or inhibited on exposure for five minutes. The pH value of cooked rice prepared using AESS was in the range of 3.6 to 4.3 and was not almost changed through the storage period. Various concentrations of cell suspension of Bacillus isolates were inoculated to cooked rice, which were prepared with tap water and AESS, and stored at $37^{\circ}C$ for two weeks. The result was shown that the bacteria in tap water-based cooked rice appeared normal cell growth, while they were completely repressed in AESS-based cooked rice.

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Antimicrobial Activities of Medicinal Herbs and Seaweeds Extracts Against Microorganisms Isolated from the Rice Warehouses (미곡창고 오염균주에 대한 천연추출물의 항균활성)

  • Lee, So-Young;Kim, Jin-Hee;Kim, Koth-Bong-Woo-Ri;Song, Eu-Jin;Kim, Ah-Ram;Park, Sun-Mee;Han, Chung-Soo;Ahn, Dong-Hyun
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.36 no.4
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    • pp.476-480
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    • 2007
  • In order to prevent the quality deterioration of rice from microbial infection, we investigated antimicrobial activities of Morun albalinne, Glycyorrhiza uralensis, Sargassum siliquastrum, and Ecklonin cava against isolated microorganisms from the paddy and warehouses. The major types of the bacteria grown in the paddy and rice warehouses were Sphingomonas paucimobilis, Arthrobacter atrocyaneus, and Bacillus spp. such as Bacillus cereus Additionally Deuteromycetes, Aspergillus spp. and Penicillum spp. were considered as major contaminant microorganisms in the paddy and rice warehouses. As results of the paper disc assay against the isolated microorganisms, the ethanol extracts with Morun albalinne, Glycyorrhiza uralensis, Sargassum siliquastrum, and Ecklonia cava showed effective antimicrobial activities. Especially, Morun albalinne showed the strongest growth inhibition on the isolated bacteria at $0.0025{\sim}0.0075%$.

Fibrinolytic and Immunostimulating Activities of Bacillus spp. Strains Isolated from Chungkuk-jang (청국장에서 분리한 Bacillus spp. 균주의 혈전용해능 및 면역증강활성)

  • Chang, Jin-Hee;Shim, Youn-Young;Kim, Seung-Ho;Chee, Kyoo-Man;Cha, Seong-Kwan
    • Korean Journal of Food Science and Technology
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    • v.37 no.2
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    • pp.255-260
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    • 2005
  • To make Chungkuk-jang with enhanced fibrinolytic and immunostimulating activities, 220 strains isolated from Chungkuk-jangs were tested, and 13 Bacillus strains with excellent proteolytic and polysaccharide-producing activities were selected and tested for their fibrinolytic and immunostimulating activities using fibrin plate method and RAW 264.7 cell line, respectively. To assess macrophage activation, contents of cytokines such as tumor necrosis factor ($TNF-{\alpha}$) and $interleukin-1{\alpha}$ and nitric oxide were measured. Three strains showing highest fibrinolytic and immunostimulating activities were identified as Bacillus licheniformis (CHKJ 1249, 1326) and Bacillus subtilis (CHKJ 1339).

Impacts of Organic Farming System on the Soil Microbial Population in Upland Soil (밭토양 유기재배가 토양 미생물 생태에 미치는 영향)

  • Lee, Young-Han;Sonn, Yeon-Kyu;Ahn, Byung-Koo;Lee, Seong-Tae;Shin, Min-A;Kim, Eun-Seok;Song, Won-Doo;Kwak, Youn-Sig
    • Korean Journal of Soil Science and Fertilizer
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    • v.44 no.5
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    • pp.819-823
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    • 2011
  • The present study evaluated the seasonal changes of the soil microbial population by selected media in an organic farming system (OFS) with rye rotation cropping management compared to those in a conventional farming system (CFS) with chemical fertilizers, pesticide and herbicide from May 2009 to October 2010 in an upland field. With the exception of fungi, populations of aerobic bacteria, Gram-negative bacteria, and Bacillus spp. were higher in the OFS soil during soybean-growing stages. In addition, populations of aerobic bacteria, Gram-negative bacteria, and Bacillus spp. in the OFS soil were nearly two times more than those in the CFS soil on reproductive growth stages. Our findings suggested that Bacillus spp. should be considered as responsible factor for microbial population differentiation observed between the OFS and the CFS in upland fields.

Studies on Relationships between Marine Bacteria and Phytoplankton in Suyeong Bay -1. On Relationshops of Dominant Species between Marine Bacteria and Phytoplankton- (해양미생물과 식물플랑크톤의 상호관계 -1. 수영만의 해양세균과 식물플랑크톤 우점종 간의 상호관계-)

  • Kim, Dong-Won;Lee, Won-Jae
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.26 no.5
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    • pp.446-457
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    • 1993
  • Monthly distribution of marine bacteria and phytoplankton in Suyeong Bay were investigated with laboratory experiment of dominant algal species and bacterial flora. During the periods of study, the highest density of phytoplankton and bacteria occurred in May with the number of $3.3{\times}10^6cells/l$ and $1.93{\times}10^8cells/ml$, respectively. 10 genera of bacteria and 22 genera of phytoplankton were isolated and identified. In May when phytoplankton bloom occurred, dominant species of bacteria were Acinetobacter calcoaceticus($29.1\%$) and Bacillus subtilis($22.9\%$), and dominant species of phytoplankton were Chaetoceros spp.($62.8\%$) and Skeletonema spp. ($19.4\%$). Pseudomonas spp., which was the most abundant bacterial species during the study periods, were rapidly decreased in May. In laboratory studies of culturing bacteria and phytoplankton isloated in May, the growth of Pseudomonas vesicularis seems to be influenced by the concentrations of excretion matter of Chaetoceros spp. To examine the result colsely, the problem of pure isolation for phytoplankton must be solved and more experimental process have to be conducted.

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Purification and Characterization of Extracellular Inulinase from Bacillus sp. (Bacillus sp.가 세포외로 생산하는 Inulinase의 정제 및 특성)

  • 김경남;최용진
    • Microbiology and Biotechnology Letters
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    • v.18 no.5
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    • pp.490-495
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    • 1990
  • The extracellular inulinase from Bacillus spp. was purified to a single protein through a sequence of operations including ammonium sulfate fractionation, heat treatment, DEAE Sepharose C1-6B ion exchange chromatography, Sephadex 6-100 and Sephadex 6-150 gel filtration. The purified enzyme was confirmed to be a $\beta$ -D-fructofuranosidase(EC 3.2.1.26) which was much more active on sucrose than on inulin(I/S = 0.2). The maximal inulinase activity was observed at pH 6.0 and at the temperature of $50^{\circ}C$. The mo1ecular weight of the enzyme was about 56, 000. Tryptophan and histidine residues of the enzyme molecule were found to be essential for its catalytic activity.

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