• Title/Summary/Keyword: BP

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Biochemical Characteristics of Cd-binding High Molecular Weight Proteins (카드뮴 결합 고분자량 단백질의 생화학적 특성)

  • 천기정;김봉희
    • YAKHAK HOEJI
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    • v.39 no.4
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    • pp.380-384
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    • 1995
  • The isoelelectric points of Cd-BP(l) and Cd-BP(II), cadmium-binding proteins, were 6.01 and 5.35, respectively. Both of them contained zinc. As for the amino acid composition, Cd-BP(I) contained a lot of glycine and lysine but none of such aromatic amino acids as tyrosine and phenylalanine.. On the other hand, Cd-BP(II) contained leucine, histidine, asparti cacid and alanine but no aromatic amino acids.

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Dynamics of Super-cooled state in Cholestric and Smectic Blue Phases

  • Yamamoto, Jun
    • 한국정보디스플레이학회:학술대회논문집
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    • 2008.10a
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    • pp.1381-1382
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    • 2008
  • Cholesteric Blue phase (ChBP) is constructed by the regular arrangement of the double helix, whereas the Smectic Blue phase (SmBP) has the inter-connected multi-lamellar structure. Orientation fluctuations of polymer stabilized ChBP and spontaneously super-cooled SmBP are discussed. Spatial topology of the defects play key role on the dynamic properties.

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A Major DNA Marker Mining of BMS941 Microsatellite Locus in Hanwoo Chromosome 17

  • Lee, Jea-Young;Lee, Yong-Won
    • Journal of the Korean Data and Information Science Society
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    • v.16 no.4
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    • pp.913-921
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    • 2005
  • We describe tests for detecting and locating quantitative traits loci (QTL) for traits in Hanwoo. Lod scores and a permutation test have been described. From results of a permutation test to detect QTL, we select major DNA markers of BMS941 microsatellite locus in Hanwoo chromosome 17 for further analysis. K-means clustering analysis applied to four traits and eight DNA markers in BMS941 resulted in three cluster groups. We conclude that the major DNA markers of BMS941 microsatellite locus in Hanwoo chromosome 17 are markers 80bp, 85bp 90bp and 105bp.

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Studies on the MC1R Gene Frequencies in Landrace, Large White, Duroc and Jeju Native Black Pigs (랜드레이스, 대요크셔, 듀록 및 제주 흑돈의 Melanocortin 1 Receptor(MC1R) 유전자의 유전자형 분석)

  • Cho, I.C.;Lee, J.G.;Jung, J.G.;Yang, B.S.;Kang, S.Y.;Kim, B.W.
    • Journal of Animal Science and Technology
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    • v.44 no.2
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    • pp.207-212
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    • 2002
  • This study was conducted to investigate the genotypes and frequencies of Melanocortin 1 Receptor(MC1R) genes in pigs which plays a central role in regulation of eumelanin (black/brown) and phaeomelanin(red/yellow) pigment synthesis within the mammalian melanocytes. Four different breeds of pigs(20 Landrace, 20 Yorkshire, 20 Duroc, and 93 Jeju native black pigs) were used and PCR-RFLP analysis of MC1R gene was also carried out. Two regions of MC1R genes (428bp and 405bp) were amplified using two specific primers (MERL1-EPIG2, EPIG1-EPIG3), respectively and MC1R allele were determined using 2 restriction enzymes (BspHⅠ, AccⅡ). The results of this experiment indicated that MC1R allelic type in Landrace, Large Yorkshire and Duroc were MC1R *2 (Ep), MC1R *2 (Ep), MC1R *4 (e), respectively. However, various allelic types of MC1R genes were detected in Jeju native black pigs. MC1R allelic type of Jeju black pigs was MC1R*2 type as in Meishan and Large black breeds or MC1R*3 type as in Hampshire and Berkshire breeds and the gene frequencies of ED1 and ED2 were 0.554 and 0.446 in average.

Genetic Variation and Phylogenetic Relationship of Taraxacum Based on Chloroplast DNA (trnL-trnF and rps16-trnK) Sequences (엽록체 DNA (trnL-trnF, rps16-trnK) 염기서열에 의한 국내 민들레속 유전자원의 유전적 변이와 유연관계 분석)

  • Ryu, Jaihyunk;Lyu, Jae-il;Bae, Chang-Hyu
    • Korean Journal of Plant Resources
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    • v.30 no.5
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    • pp.522-534
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    • 2017
  • This study was investigated genetic variation in 24 Taraxacum accessions from various regions in South Korea based on the sequences of two chloroplast DNA (cpDNA) regions (trnL-trnF and rps16-trnK). T. mongolicum, T. officinale, and T. laevigatum were triploid, and T. coreanum and T. coreanum var. flavescens were tetraploid. The trnL-trnF region in native Korean dandelions (T. mongolicum, T. coreanum, and T. coreanum var. flavescens) were ranged from 931 to 935 bp in length, and that of naturalized dandelions were ranged from 910 bp (T. officinale) to 975 bp (T. laevigatum) in length. The rps16-trnK region in T. mongolicum, T. coreanum, T. coreanum var. flavescens, T. officinale, and T. laevigatum was 882-883 bp, 875-881 bp, 878-883 bp, 874-876 bp, and 847-876 bp, respectively, in length. The sequence similarity matrix of the trnL-trnF region ranged from 0.860 to 1.00 with an average of 0.949, and that of the rps16-trnK region ranged from 0.919 to 1.000 with an average of 0.967. According to the phylogenetic analysis, the Korean native taxa and naturalized taxa were divided independent clade in two cpDNA region. T. coreanum var. flavescens clustered only with T. coreanum, and there were no significant differences in their nucleotide sequences. The finding that two accessions (T. coreanum; Jogesan, T. mongolicum; Gangyang) had a high level of genetic variation suggests their utility for breeding materials.

Expression of Sex-Related Genes in the Fetus of Mouse: 2-Bromopropane and Sex Differentiation (생쥐 태자의 성 관련 유전자 발현: 2-Bromopropane과 성 분화)

  • Choi, Donchan;Lim, Sinae;Kim, Pan Gyi;Kim, Dae-Yong;Lee, Young-Soon
    • Development and Reproduction
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    • v.5 no.2
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    • pp.107-114
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    • 2001
  • The recent reports that endocrine disruptors(EDs) bring about abnormalities in reproductive organs and functions of invertebrates suggest that mammals be affected by the EDs. The present study examined the influence of 2-bromopropane(2-BP) by looking at the sexes of litters in mouse. The expression of sex-related genes during sex differentiation was also investigated in the fetus of mouse. The male and female mice were infused with 2-BP for 3 weeks before mating. The litters were sexed at the weaning time from the 4 different groups. The sex-related genes were identified by RT-PCR from the fetuses at gestation 10 days. The sequences of the genes were analysed by comparing to those of other animals. The mean numbers of litters survived by the weaning time were slightly reduced in the only group of both female and male mice treated with 2-BP. The female litters were greater than male litters in the only group of female treated with 2-BP. The other groups showed male litters greater than female litters. The sex-related genes, SRY, DAX1, SF1 , and AMH genes were identified and sequenced, showing 416, 466, 326, 389 base pairs, respectively. All of the genes had the homology of 89~90% with rat and 81~92% with human within the range of bases identified. They were expressed at the time of sex determination. Therefore, it appears that 2-BP somewhat affects the reproductive activity of adult mouse. Influence of 2-BP on the reproductive function is expected to be studied through the expression of the sex-related genes.

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Phylogenetic Relationship and DNA Polymorphism of Boleophthalmus pectinirostris and Scartelaos gigas (Teleostei: Gobiidae) of Korea (한국산 짱뚱어(Boleophthalmus pectinirostris)와 남방짱뚱어(Scartelaos gigas) (Gobiidae)의 분자유전학적 계통연관과 DNA 다형화)

  • Choi, Ki Ho;Chung, Ee Yung;Park, Gab Man
    • Korean Journal of Ichthyology
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    • v.25 no.3
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    • pp.149-156
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    • 2013
  • Phylogenetic relationships and DNA polymorphism among local populations of two Korean gobiidae species: Boleophthalmus pectinirostris and Scartelaos gigas were investigated based on 12S and 16S mitochondrial DNA and mitochondrial cytochrome b DNA sequences. DNA polymorphisms of B. pectinirostris between Suncheon and Gunsan populations were 100% identity from 434 bp segment of 12S rRNA gene and from 444 bp segment of mitochondrial cytochrome b genes, and 99.6% (2 bp different) identity from 484 bp segments of 16S rRNA genes. These results indicated the long period of geographic isolation between two populations of B. pectinirostris in Korea caused such high degrees of DNA polymorphisms. Based on the phylogenetic tree constructed from the two gobiid species in Korea, two genetically distinct groups of B. pectinirostris and S. gigas groups were recognized.

Late Holocene Environment and Vegetation Change of Eurimji Reservoir, Jecheon, Korea (홀로세말 의림지 호소환경과 식생변천 고찰)

  • Kang, Sang-Joon;Yi, Sang-Heon;Kim, Ju-Yong
    • The Korean Journal of Quaternary Research
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    • v.23 no.2
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    • pp.34-47
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    • 2009
  • AMS radiocarbon dates indicated that Eurimji reservoir, located at Jecheon City, Chungbuk Province, has been formed during the late Holocene Epoch. The sedimentary sequence at bottom reveals histories in hydrology, climate conditions and past vegetation dynamics. Ages controlled sedimentological and palynological analyses on ER 3-1 Core contribute to reconstruct paleoclimate and past hydrological conditions. These analyses suggest that lower interval (307.5m~309.5m elevations) of the ER 3-1 Core was deposited in stable from 1,920 yrBP to 1,420 yrBP, but upper layer sediment above these elevations was composed of reworked sediments during the pre and post 2,000 yrBP. Pollen assemblage indicates that watershed vegetation of the Eurimji reservoir, during the period of 1,920 yrBP~1,420 yrBP, was closely comparable to modern vegetation dominated Pinus and Quercus mixed vegetation. Also, riparian including Alnus, Fraxinus and Salix were inhabited along the banks of stream, and aquatics such as Typha, Nymphaea and Persicaria flourished at shore of the reservoir. According to cultural chronicle, it infers that the Eurimji reservoir was formed from the Bronze Age to the Iron Age or the beginning of ancient society. An integrated data suggested that Quercus-Pinus-Abies mixed forest flourished under cool and dry climate conditions during 3,200 yrBP~200 yrBP.

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Phytolith Analysis of Sediments in the Lake Gyeongpo, Gangneung, Korea and Climatic Change in the Holocene (경포호의 식물규소체(phytolith) 분석과 Holocene 기후변화)

  • Yoon, Soon-Ock;Kim, Hyo-Seon;Hwang, Sang-Ill
    • Journal of the Korean Geographical Society
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    • v.44 no.6
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    • pp.691-705
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    • 2009
  • Phytolith analysis was made on a 660cm core from Lake Gyeongpo in the East Sea of Korean Peninsula to clarify the environmental change including climate and agricultural characteristics during the Holocene. From the results of phytolith analysis, six phytoliths assemblage zone(PAZ) were recognized from the base to the surface. PAZ I around 5,000 yr BP suggests the transition from the warm and dry to the cool and wet climatic conditions. The climate of PAZ II(ca. 4,000-2,000 BP) was kept on warm, but repeated between dry and wet conditions. PAZ III(2,000~1,000 yr BP) suggests the expansion of agricultural activities under the warm and humid climatic conditions due to the significant phytoliths production of Paniceae and Oryza sativa. While PAZ IV(1,000~500 yr BP) indicates very cool and dry conditions, PAZ V and IV suggest the warm-dry and cool-humid climatic conditions, respectively. Similar to the results of pollen analysis in the lake, the agricultural activities were recognized by PAZ III around 2,000 yr BP from the results of phytolith analysis, and the rice cultivations such as Oryza sativa have been expanded since 2,000 yr BP or later.

Detection of Porcine Stress Syndrome from Genomic DNA of Hair Follicle by PCR-RFLP in Breeding Pig (종돈의 모근 Genomic DNA를 이용한 스트레스 증후군 검색)

  • 김계웅;김진우;유재영;박홍양
    • Reproductive and Developmental Biology
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    • v.28 no.1
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    • pp.37-43
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    • 2004
  • This study was carried out to investigate PSS (Porcine Stress Syndrome) with the PSE (Pale, Soft, Exudative) in 319 different pigs(Yorkshire 150; Landrace 89 and Duroc 80). The PCR-RFLP method was adapted to detect the ryanodine receptor (RYR 1) gene mutation and to estimate the genotype frequency of the RYR1 gene in breeding pig population. The DNA samples were collected from hair follicles of pigs of Yorkshire, Landrace and Duroc. After DNA amplification by PCR, the PCR products were digested by restriction enzyme, Cfo I. Primary PCR products of ryanodine receptor gene were length of 659 bp in hair follicle and their second PCR products were length of 522 bp in hair follicle. The exon region (522 bp) including point mutation ($C \arrow T; Arg \arrow Cys$) in the porcine ryanodine receptor gene, which is a causal mutation for PSS, was digested with Cfo I restriction enzyme. The RYR1 gene was classifed into three genotypes by agarose gel electrophoresis. The normal homozygous (NN) individuals showed two DNA fragments consisted of 439 and 83 bp. The mutant homozygous (nn) individuals showed only one DNA fragment 522 bp. In addition, all three fragments (522, 439 and 83 bp) were showed in heterozygous (Nn) carrier animals. The normal homozygous (NN), heterozygous (Nn) and mutant homozygous (nn) were 98.00, 2.00 and 0.00% in Yorkshire pigs, 87.64, 11.24 and 1.12% in Landrace, 100.00, 0.00 and 0.00% in Duroc, respectively. The gene frequencies of N and n were 0.990 and 0.010 in Yorkshire pigs, 0.933 and 0.067 in Landrace, 1.000 and 0.000 in Duroc, respectively.