• The Korean Journal of Ecology
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• v.8 no.2
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• pp.109-117
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• 1985

This report is a part of the investigations of the secondary vegetation successions carried out and the analysis of soil properties in the burned areas of forest. The fires-crown fire and surface fire-were occurred at April, 1978 and February, 1984. The investigations were carrited out from August 10. 1983 to September 25, 1984. The burned areas studied are located in southern slope of Mt. Ssalibagu (above sea-level, 590m), So-myon, Sungju-gun, Chollanam-do, Korea. The results are as follows: The floristic compositions of the burned area at the 5th year after the fires were 85 families, 250 genera, 321 species and 53 varieties. Among them, 85 families, 127 genera, 129 species and 30 varieties were found in the currently burned area. In all the sampling sites (10*10cm), 31 and 57 species were found in the currently burned and in the 5th years after the fires, respectively. Miscanthus sinensis var. purpurascens, Quercus serrata and Festuca ovina were dominant species in the both areas. Biological spectra in both the burned areas showed $H-D_1-R_5-e$ type. Degree of the succession(DS) was 412-884 in the 5th years passed burned area and it was high level. Species diversity index(H) was 0.59~1.13 and evennes index(e) was 0.43~0.79, these indexes between both areas were different considerably. Indexes of similarity between both areas were different, too, but that between $B_1$ and $B_6$ was the highest (CCj=0.5). Probably this phenomenon is due to the great numbers of the pine trees appeared simulataneously. Content of the organic matter, N, P, K and Ca of soil in the burned area at the 5th years after the fires was lower than that of soil in the currently burned area.

• Korean Journal of Environment and Ecology
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• v.15 no.4
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• pp.394-400
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• 2002

A mixed forest community of broad-leaved trees in Guryongsan area was studied to determine the adequate number of plots of tree and shrub strata for investigating forest community structure. Fifteen 10m$\times$10m plots were set up in the tree stratum and fifteen 5m$\times$5m plots were set up in the shrub stratum. Species-area curves and performance curves were made from vegetation analysis of the plots. In tree stratum, the minimum number of plots where a given percentage increase in number of plots produced less than the same percentage in number of species was five. In tree stratum, minimum number of plots where a given percentage increase in nuts her of plots produced less than the half of the percentage increase in number of species was ten. In tree stratum, minimum number of plots where the dominant species was distinguished from the subdominant species was four In tree stratum. minimum number of plots where the subdominant species were distinguished from each other was eight. In tree stratum, the difference of species diversity(H') between seven or more plots and total fifteen plots was less than 0.05 Similarity index was more than 80% between aye or more plots and total fifteen plots, and more than 90% between nine or more plots and total fifteen plots. In shrub stratum, the minimum number of plots where a given percentage increase in number of plots produced less than the same percentage in number of species was five . In shrub stratum, the minimum number of plots where a given percentage increase in number of plots produced less than the half of the percentage increase in number of species was twelve. In shrub stratum. minimum number of plots where the dominant species was distinguished from the subdominant species was four. In shrub stratum, the minimum number of plots where the subdominant species were distinguished from each other was thirteen. In shrub stratum, the difference of species diversity(H') between six or more plots and total fifteen plots was less than 0.05. Similarity index was more than 80% between five or more plots and total fifteen plots, and more than 90% between nine or more plots and total fifteen plots. It may be given as a conclusion that adequate number of 10m$\times$10m plots for the tree stratnm was about 5 in general acse and 10 in case of requiring more accuracy, and that the adequate number of 5m$\times$5m plots for ahrub stratum was about 5 in general case and 13 in case of requiring more accuracy.

• The Plant Pathology Journal
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• v.34 no.1
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• pp.11-22
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• 2018

Type VI secretion system (T6SS) has been discovered in a variety of gram-negative bacteria as a versatile weapon to stimulate the killing of eukaryotic cells or prokaryotic competitors. Type VI secretion effectors (T6SEs) are well known as key virulence factors for important pathogenic bacteria. In many Burkholderia species, T6SS has evolved as the most complicated secretion pathway with distinguished types to translocate diverse T6SEs, suggesting their essential roles in this genus. Here we attempted to detect and characterize T6SSs and potential T6SEs in target genomes of plant-associated and environmental Burkholderia species based on computational analyses. In total, 66 potential functional T6SS clusters were found in 30 target Burkholderia bacterial genomes, of which 33% possess three or four clusters. The core proteins in each cluster were specified and phylogenetic trees of three components (i.e., TssC, TssD, TssL) were constructed to elucidate the relationship among the identified T6SS clusters. Next, we identified 322 potential T6SEs in the target genomes based on homology searches and explored the important domains conserved in effector candidates. In addition, using the screening approach based on the profile hidden Markov model (pHMM) of T6SEs that possess markers for type VI effectors (MIX motif) (MIX T6SEs), 57 revealed proteins that were not included in training datasets were recognized as novel MIX T6SE candidates from the Burkholderia species. This approach could be useful to identify potential T6SEs from other bacterial genomes.

• Journal of Mushroom
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• v.12 no.4
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• pp.251-257
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• 2014

The aim of this study was to analyze the genetic diversity of Hericium species based on their rDNA ITS sequences. Hericium species were collected from various regions and the size of the ITS rRNA gene regions from different Hericium species varied from 450 to 500 bp. A phylogenetic trees based on the ITS region revealed that Hericium species could be classified into 4 different groups, H. erinaceus, H. coralloide, H. alpestre, H. americanum. Among them, ASI 48015 and ASI 48016 was identified as Sprassis and Lentinula genus, respectively, based on blast searches using their rDNA ITS sequences.

• Korean Journal of Microbiology
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• v.35 no.3
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• pp.180-184
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• 1999

Molecular spslemaucs of Agaricus species was investigated on the base of the sequences of the internal transcribed spaceriITS) regions in ribosomal DNA (rDNA). The sequences of the ITS region in 5 species and two group of Agaricus genus were resolved. In the phylogenetic trees. the species generally divided inlo two subclusters, refered to here as the group I and group 11. The group I consisted of Agaricus blazei ATCC 76739, Agarictrs blazei species cultivated in Korean hmings. Ago/-icus anmensis IMSNU 32049 and Agaricus can~pestris VPI-OKM 25665. Between Agaricus blazei NCC 76739 and the Agaricus blazei species cultivated in Korean farmings had the variation in lhe 5 nucleotide on the ITS regions. These varieties were presumed the variation by the geographic and cultivated conditions. In addition the subgroup of group I was formed by Agaricus arvensis LMSNU 32049 and Agaricus carnpests VPI-OKM 25665. The group IT included Agnrictrs bispoms CH 3004 and Agaricus pocillotor DUKE-J 173.

• Korean Journal of Environment and Ecology
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• v.27 no.4
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• pp.462-472
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• 2013

This study was carried out to provide a basic data for preservation of Pinus desiflora forest as cultural landscape forest by analyzing characteristics of plant community of P. desiflora forest in Geumjeongsan(mountatin) in Busan city. In order to analyze plant community of P. densiflora in Geumjeongsan, we set up 10 study plots inside and 8 plots outside of Geumjeongsansung(mountain fortress, hereinafter 'Sansung')(unit area: $400m^2$), a total of 18 plots. TWINSPAN analysis divided these 18 study plots into 6 communities which are Querqus serrata-P. desiflora community, P. desiflora community, P. desiflora-Q. serrata community, P. thunbergii-P. densiflora community, P. densiflora-P. thubergii-Q. acutissima community, and P. densiflora-Platycarya strobilacea community. Importance Percentage (I.P.) of each area and DBH class distribution of main species showed that P. densiflora community would succeed to Q. serrata community or C. tschonoskii community. Analysis on tree age found out that communities in the Sansung were 32~37 years old and those outside the Sansung were 44~57 years old. Shannon's species diversity index ranged from 0.4826 to 1.2499. Regarding correlation between species, P. densiflora had negative correlation with Styrax japonica. Based on abovementioned result we expected ecological succession from P. densiflora community to Q. serrata community inside of the Sansung. Outside the Sansung, succession from P. densiflora-P. thunbergii community to C. tschonoskii-Q. serrata community was expected. In order to manage P. densiflora forest as cultural landscape forest, Q. spp in the understory and shrub layer and deciduous broad-leaved arboreal trees should be managed. Tree crown management of deciduous broad-leaved trees in competition with P. desiflora, is also required.

• Journal of the Korean Institute of Landscape Architecture
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• v.47 no.5
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• pp.66-77
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• 2019

This study investigated the feasibility of wintering evergreen broad-leaf trees in the Incheon coastal area through a climate analysis. The coldest monthly mean air temperature ranged from $-2.9^{\circ}C{\sim}-1.6^{\circ}C$. The warmth index of the coastal area of Incheon ranged from $98.89^{\circ}C{\cdot}month-109.03^{\circ}C{\cdot}month$, while the minimum air temperature year ranged from $-13.9^{\circ}C{\sim}-3.6^{\circ}C$. This proved that the Incheon coastal area was not suitable for evergreen broad-leaf trees to grow as the warmth index ranges from $101.0^{\circ}C{\cdot}month{\sim}117.0^{\circ}C{\cdot}month$, and the temperature year-round is $-9.2^{\circ}C$ or higher. This suggests the coastal areas of Incheon is not suitable for the growth of evergreen broad-leaf trees, however some evergreen broad-leaf trees lived in some parts of the area. Wind speed reduction and temperature effect simulations were done using Landschaftsanalyse mit GIS program. As a result of the simulations of wind speed reduction and temperature effects affecting the evergreen broad-leaf trees, it was discovered that a coastal wind velocity of 8.6m/sec was alleviated to be 5m/sec~7m/sec when the wind reached the areas where evergreen broad-leaf trees were present. It was also discovered that species that grew in contact with buildings benefited from a temperature increase of $1.1^{\circ}C{\sim}3.4^{\circ}C$ due to the radiant heat released by the building. Simulation results show that the weather factors affecting the winter growth damages of evergreen broad-leaved trees were wind speed reduction and local warming due to buildings. The wind speed reduction by shielding and local warming effects by buildings have enabled the wintering of evergreen broad-leaved trees. Also, evergreen broad-leaved trees growing in the coastal area of Incheon could be judged to be gradually adapting to low temperatures in winter. This study reached the conclusion that the blockage of wind, and the proximity of buildings, are required for successfully wintering evergreen broad-leaf trees in the coastal area of Incheon.

• Korean Journal of Agricultural and Forest Meteorology
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• v.1 no.2
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• pp.81-89
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• 1999

To propose basic information for natural resource management and conservation strategy of Schisan-dra nigra Maxim., its habitat environment and vegetation structure of forest communities growing the species was investigated. Fourteen plots (each plot size 400 $m^2$) were set up at the distributed area of Cheju island, southern part of Korea. S. nigra is the economic useful species that scatteringly grows at 850~920 m in the western part, at 660~710 m in the northern part and at 750~1,250 m in the southern part of Mt. Halla. The community of S. nigra in Mt. Halla is the mixed secondary forest of pine and broad leaved trees that are mainly composed of Pinus densif1ora, Quercus serrata, Styrax japonica, Lin-dera erythrocarpa and Carpinus laxiflora. The density in a main distribution sector of S. nigra appears in the range of 3~39 individuals per each 20$\times$20 m plot. The distribution patterns by Morisita's Index showed that S. nigra was distributed randomly in all of the stands. The association analysis showed that the following tree species were positively associated with S. nigra. In other words, the following trees were appeared to require the same ecological niche together with S. nigra: Lindera erythrocarpa, Cornus waltri, Acer mono, and Styrax japonica.

• Journal of Korean Society of Forest Science
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• v.81 no.4
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• pp.325-336
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• 1992

The successional status and potential natural vegetation were examined in a mixed broadleaved-Abies forest located at Mt, Odae National Park. The examination was based on the subsequent process of generation replacement by understory saplings for the dominant canopy trees within 88 $5m{\times}50m$ belt transects. The transition matrix model, which was modified from mathematical theory of Markov chain, was employed to analyze the successional status of the study forest. The model suggests that the study forest is still seral, and it is considered to be more than 700 years away from the steady state or climax in terms of species composition. The simulations predict a remarkable decrease in the proportion of species composition of the present dominant Quercus mongolica and Tilia amurensi.s from current 28% and 13% to less than 3% and 5%, respectively, at the steady state. On the contrary, the proportions of Abies holophylla, Acer pseudo-sieboldianum, Carpinus cordata, and Pinus koraiensis will increase at the steady state. The ratio of mixture between deciduous and coniferous trees will be gradually changed from current 6.5 : 3.5 to 5.0 : 5.0 at equilibrium. Discussion for the problems of Quercus mongolica in successional status noted that the species behaved as a mid-successional dominant, not a climax species in the study forest. The hypothesis and sensitivity of the transition matrix model were also discussed to evaluate the applicability to the real situation. The overall results indicated that the present dynamics of the forest must reflect the seral state due to previous disturbance mainly by hyman related interference.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.14 no.6
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• pp.41-55
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• 2011

This study was carried out to survey and analyze the transition of landscape plants on an apartment complexes in the 1990's and 2000's. The results are summarized as follows; The ratio of landscape area was increased from 30.0% to 34.7%. The number of trees per 100 square meter decreased from 22.5 to 15.7. The number of shrub per 10 square meter increased from 19.3 to 38.7. Species of Evergreen tree were increased 21 to 39. The species that a lot of use continuously were Pinus densiflora, Pinus strobus and Taxus cuspidata. The species that increase use were Abies holophylla and Pinus densiflora for. multicaulis. The species that decrease use exceedingly, were Pinus parviflora, Juniperus chinensis, Pinus koraiensis and Thuja orientalis. The species that do not use were Cedrus deodara. Species of deciduous tree were increased 42 to 68. The species that a lot of use continuously were Zelkova serrata, Acer palmatum, Diospyros kaki, Prunus armeniaca and Prunus yedoensis. The species that increase use were Lagerstroemia indica, Chionanthus retusa, Cornus officinalis, Styrax japonica, Sorbus alnifolia, Prunus mume, Cercidiphyllum japonicum, Acer triflorum, Prunus sargentii, Chaenomeles sinensis and Cornus kousa. The species that decrease use exceedingly, were Acer buergerianum, Sophora japonica, Malus spp., Ginkgo biloba, Zizyphus jujuba var. inermis, Platanus orientalis and Albizzia julibrissin. The species that do not use were Liriodendron tulipifera, Acer saccharinum, Ailanthus altissima and Paulownia coreana. Species of shrub were incresed 39 to 65. The species that a lot of use continuously were Buxus koreana, Rhododendron schlippenbachii for. albiflorum, Rhododendron schlippenbachii, Syringa dilatata and Euonymus japonica. The species that increase use were Rhododendron indicum, Ilex serrata, Spiraea prunifolia var. simpliciflora, Taxus cuspidata var. nana, Kerria japonica, Rhododendron yedoense var. poukhanense, Euonymus alatus, Sorbaria sorbifolia var. stellipila, Nandina domestica, Cornus alba, Hydrangea serrata for. acuminata, Prunus tomentosa, Deutzia parviflora and Pyracantha angustifolia. The species that decrease use exceedingly, were Hibiscus syriacus, Rosa multiflora var. platyphylla, Chaenomeles lagenaria and Rosa spp. The species that do not use were Juniperus chinensis var. sargentii, Jasminum nudiflorum and Sasa borealis.