• 제목/요약/키워드: Algal community

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Assessment of the Dynamics of Microbial Community Associated with Tetraselmis suecica Culture under Different LED Lights Using Next-Generation Sequencing

  • Yang, Su-Jeong;Kim, Hyun-Woo;Choi, Seok-Gwan;Chung, Sangdeok;Oh, Seok Jin;Borkar, Shweta;Kim, Hak Jun
    • Journal of Microbiology and Biotechnology
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    • 제29권12호
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    • pp.1957-1968
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    • 2019
  • Tetraselmis is a green algal genus, some of whose species are important in aquaculture as well as biotechnology. In algal culture, fluorescent lamps, traditional light source for culturing algae, are now being replaced by a cost-effective light-emitting diodes (LEDs). In this study, we investigated the effect of LED light of different wavelengths (white, red, yellow, and blue) on the growth of Tetraselmis suecica and its associated microbial community structures using the next-generation sequencing (NGS). The fastest growth rate of T. suecica was shown in the red light, whereas the slowest was in yellow. The highest OTUs (3426) were identified on day 0, whereas the lowest ones (308) were found on day 15 under red light. The top 100 OTUs associated with day 0 and day 5 cultures of T. suecica under the red and yellow LED were compared. Only 26 OTUs were commonly identified among four samples. The highest numbers of unique OTUs were identified at day 0, indicating the high degree of initial microbial diversity of the T. suecica inoculum. The red light-unique OTUs occupied 34.98%, whereas the yellow-specific OTUs accounted for only 2.2%. This result suggested a higher degree of interaction in T. suecica culture under the red light, where stronger photosynthesis occurs. Apparently, the microbial community associated with T. suecica related to the oxygen produced by algal photosynthesis. This result may expand our knowledge about the algae-bacteria consortia, which would be useful for various biotechnological applications including wastewater treatment, bioremediation, and sustainable aquaculture.

광양만의 해조류에 관한 연구 1. 해조군집의 계절적 변화 (A Study on the Marine Algae in the Kwang Yang Bay 1. the Seasonal Variation of Algal Community)

  • 이인규
    • Journal of Plant Biology
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    • 제18권3호
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    • pp.109-121
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    • 1975
  • The seasonal variations of the marine algal community were detected with quadrat method during May, 1974-May, 1975 at several stations in the Kwang Yang Bay. Considering the environmental factors such as salinity and water current, etc., and algal vegetation, the Bay was divided into 3 sections; Section I-Myodo and the adjacent area; Section II-Eomnamuseom and the adjacent area; Section III-inlet of the Bay from Odongdo, Yeosu. The dominant species, shown by 5-grades coverage and bimonthly investigations, appear in the order of Sargassum thunbergii(Jan.)>Chondria crassicaulis (Mar.)>Ulva pertusa(May)>U. pertusa (July)>U. pertusa and Gigartina intermedia(Sept.)> Sarg. thunbergii and Gelidium pusillum (Nov.) in Section I, and Sargassum thunbergii(Jan.)>Ulva pertusa and Hizikia fusiforme (Mar.)>U. pertusa and Sarg. thunbergii(May)>Chondria crassicaulis (Sept.)>Ch. crassicaulis (Nov.) in Section II. The members such as Srgassum thunbergii, Gelidium pusillum, G. divaricatum, Hizikia fusiforme, Carpopeltis affinis, and Chondria crassicaulis show the most luxuriant period of growth in winter (Nov.-Mar.), while Ulva pertusa shows the period in May. However, considering the dry weight of total vegetation, the most luxuriant period apperas in May and the poorest one in July. The total dry weight of the vegetation in Section II is about 3.2 times more than the one in Section I.

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동해 남부해역 조하대 조식동물 군집구조 변화와 대형 해조군락 천이와의 상관성 - 조식성 복족류를 중심으로 - (Correlation between Community Structure of Herbivore and Succession of Macro-algal Flora in the Subtidal Area of East Coast of Korea - Focusing on the herbivorous gastropods -)

  • 권정노;정민지;김대익;손민호
    • 한국패류학회지
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    • 제26권3호
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    • pp.185-199
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    • 2010
  • Correlation between community structure of herbivore and succession of macro-algal flora was examined in subtidal area of Dang-Sa Province, eastern coast of Korea from April 2008 to December 2009. For examination, the authors hypothesized that there are significant correlation between the foregoing two variables. Samplings were conducted every two months quantitatively with SCUBA diving at -3, -6 and -10 depth in the two line transects (barren and forest grounds). As results, rhodophyts was predominated in the algal flora based on the number of species and biomass; molluscs was predominated in the herbivores based on the number of species and echinoderms was predominated in that based on the biomass. There was no significant correlation between the foregoing two variables in the whole survey area and barren/forest grounds. Consequently, the hypothesis was rejected. The authors proposed that examination of correlation between the foregoing two variables should focus on the specific herbivore group(s) (e.g., amphipods) afterward.

소규모 농업용 전대저수지의 수환경 변화와 조류발생 특성 (Characteristics of Aquatic Environment and Algal Bloom in a Small-scaled Agricultural Reservoir (Jundae Reservoir))

  • 남귀숙;이의행;김미리내;배요섭;엄한용
    • 환경생물
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    • 제31권4호
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    • pp.429-439
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    • 2013
  • 축산과 농경배수가 주요 오염원인 소규모 농업용 저수지, 전대저수지에서 2011년 3월부터 2013년 10월까지의 모니터링 결과를 바탕으로 수환경 변화와 조류발생 특성을 분석함으로써, 부영양화된 소형저수지에서의 수환경과 조류발생 (Algal bloom)과의 관계를 규명하고자 하였다. 2013년의 경우 전년에 비해 강우가 적은 사실을 제외하면 기상의 큰 변화는 없었다. 전대저수지의 TN, TP등 영양염류농도는 농업용수 수질기준을 초과하고 있으며 발생원인이 상이하였다. 조류발생과 수환경요인간의 상관관계가 많은 항목에서 중상관($r{\geq}0.25$)의 관계를 보여주어 부영양 호소에서 COD 발생과 조류발생이 매우 복합적으로 이루어짐을 짐작케 했다. 전대저수지에서 출현한 식물플랑크톤은 총 6과 40속 62종이었으며, 현존량은 $1.3{\times}10^4{\sim}2.8{\times}10^6$ cells $mL^{-1}$로 TN, TP의 농도 감소와 함께 식물플랑크톤의 현존량도 연차별로 점차 감소하였다. 주요 우점종은 남조류인 Anabaena sp., Oscillatoria sp., Microcystis sp. 등이었으며, Oscillatoria sp.의 우점빈도가 가장 높았다. 수온이 증가하면서 Anabaena sp., Microcystis sp., Oscillatoria sp. 순으로 우점종이 변화하였으며, TN이 높은 경우 Anabaena sp., TP가 높은 경우 Microcystis sp.가, TN과 TP가 낮은 경우 Oscillatoria sp.가 우점하였다. N/P ratio는 Anabaena sp. 우점시 가장 높았고, Oscillatoria sp. 우점시 가장 낮았다. Chl-a 농도는 Oscillatoria sp. 우점시 높게 나타나고, 식물플랑크톤 현존량은 Anabaena sp. 우점시 높게 나타났으며, Microcystis sp. 우점시에는 Chl-a와 현존량 모두 낮았다. 이를 통해, 오염이 심각한 소형저수지에서는 Microcystis sp.보다 Anabaena sp.와 Oscillatoria sp.에 의한 대발생이 주로 문제가 됨을 알 수 있었다. Anabaena sp.가 우점할 때는 수환경 요인간의 상관계수가 높아 예측과 관리에 활용이 가능한 반면 Oscillatoria sp. 우점시에는 Chl-a 상관성이 낮게 나타나는 등, 조류대발생을 신속하게 예측하고, 예방, 관리하기 위해서는 조류발생 환경과 원인종의 관계를 규명하고 이를 활용하는 방안이 필요할 것으로 사료된다.

Refinements for the amplification and sequencing of red algal DNA barcode and RedToL phylogenetic markers: a summary of current primers, profiles and strategies

  • Saunders, Gary W.;Moore, Tanya E.
    • ALGAE
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    • 제28권1호
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    • pp.31-43
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    • 2013
  • This review provides a comprehensive summary of the PCR primers and profiles currently in use in our laboratory for red algal DNA barcoding and phylogenetic research. While work focuses on florideophyte taxa, many of the markers have been applied successfully to the Bangiales, as well as other lineages previously assigned to the Bangiophyceae sensu lato. All of the primers currently in use with their respective amplification profiles and strategies are provided, which can include full fragment, overlapping fragments and what might best be called "informed overlapping fragments", i.e., a fragment for a marker is amplified and sequenced for a taxon and those sequence data are then used to identify the best primers to amplify the remaining fragment(s) for that marker. We extend this strategy for the more variable markers with sequence from the external PCR primers used to "inform" the selection of internal sequencing primers. This summary will hopefully serve as a useful resource to systematists in the red algal community.

동해 연안 영일만 조간대 해조류의 군집구조 (A Study on the Community Structure of Intertidal Benthic Marine Algae in Youngil Bay, Eastern Coast of Korea)

  • 박규진;최창근
    • 한국수산과학회지
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    • 제42권6호
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    • pp.664-673
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    • 2009
  • An intertidal marine benthic algal vegetation and vertical distribution at Youngil Bay, the eastern coast of Korea was investigated to clarify the community structure and vertical distribution by quadrat method from February 2003 to January 2009. Marine algae identified from the area were 152 species; 25 green, 38 brown and 89 red algae. The dominant species were Ulva spp., Ulva pertusa, Chaetomorpha moniligera, Undaria pinnatifida, Sargassum horneri, S. miyabei, S. thunbergii, Gelidium amansii, Corallina pilulifera, Grateloupia elliptica, G. filicina, Prionitis cornea, Chondrus ocellatus, Chondracanthus intermedia, Acrosorium polyneurum, Chondria crassicaulis, Polysiphonia morrowii and Symphyocladia latiuscula at study sites. The vertical distribution of intertidal marine algae was divided into three distinct zones. They were characterized by Porphyra spp. and Ulva spp. at the upper, Ulva spp. and Ulva pertusa at the middle, and Sargassum spp., Gelidium amansii, Grateloupia spp., Chondrus ocellatus and Chondria crassicaulis at the lower zones, respectively. Functional form group analysis showed that coarsely branched forms comprised 44.7% of the algal community, whereas thick leathery forms, sheet forms and filamentous forms comprised 6.6-25.7%. R/P, C/P and (R+C)/P values were 2.34, 0.66 and 3.00, respectively.

Ecological Studies on Togyo Reservoir in Chulwon, Korea VI. The List of Phytoplankton and Periphyton

  • Lee, Kyung;Yoon, Sook-Kyung
    • ALGAE
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    • 제18권4호
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    • pp.263-272
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    • 2003
  • The composition of phytoplankton and periphyton community in Togyo reservoir was investigated. A total of phytoplankton was composed of 150 taxa, belonging to 6 phyla, 8 classes, 15 orders, 5 suborders, 31 families, 71 genera, 106 species, 14 varieties, 1 form and 29 unidentified species. The observed number of diatoms and green algae were much higher than others. Within diatoms the pennate diatoms appeared more than centric diatoms and solitary forms or colonial forms appeared more than filamentous forms in green algae. A total of epipelic algae was composed of 125 taxa, belonging to 3 phyla, 3 classes, 6 orders, 3 suborders, 13 families, 30 genera, 87 species, 29 varieties, 2 forms and 7 unidentified species. The diatoms appeared much more than others. Among those, the pennate diatoms dominated the centric diatoms in species number observed. A total of epilithic algae was composed of 114 taxa, belonging to 4 phyla, 4 classes, 11 orders, 3 suborders, 22 families, 38 genera, 79 species, 8 varieties, 1 form and 26 unidentified species. The observed number of diatoms and green algae were much higher than others. Within diatoms the pennate diatoms dominated the centric diatoms in species number observed. The dominance of pennate diatoms of the diatom community in the epipelic algal community and the epilithic algal community could be assumed that was due to the presence of raphe structure of pennate diatoms.

Structure of Intertidal Macroalgal Community at the Yeonpyeongdo Islets, Korea

  • Choi, Han-Gil;Yoo, Hyun-Il;Song, Hong-In
    • Fisheries and Aquatic Sciences
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    • 제11권3호
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    • pp.159-165
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    • 2008
  • Intertidal benthic algal communities on the shores of Gujido and Daeyeonpyeongdo islets, Korea, were examined in October 2007. At both sites, 45 seaweeds including 7 green, 6 brown and 32 red algae were identified. The number of species at Gujido(38 species) was 1.5 times higher than at Daeyeonpyeongdo(25 species), but seaweed coverage was very similar with about 20%. Dominant seaweeds in terms of coverage and importance value were Hildenbrandtia sp., Caulacanthus okamurae, Ulva pertusa, and Gelidium amansii at Gujido and U. pertusa, Hildenbrandtia sp., Gelidium divaricatum at Daeyeonpyeongdo. The vertical distribution pattern of the seaweeds was G. divaricatum-U. pertusa, Hildenbrandtia sp.-U. pertusa, Hildenbrandtia sp., Ishige okamurae from upper to lower intertidal zone but seaweed zonations were not observed on the Gujido rocky shore. At both sites, coarsely-branched forms were the dominant functional group in species number and percent cover(among benthic algal species). The rocky shores of the two sites were dominated by crustose coralline and green algae, whose presence generally results in decreased seaweed biodiversity and community stability. Therefore, the shores of the Yeonpyeongdo islets are of considerable environmental concern and should be monitored for seaweed species composition and community structure.

동해 남부 해역 조하대 해조류 군집구조의 계절적 변화 (Seasonal Variation in Seaweed Community Structure in the Subtidal Zone of the Southern Part of the East Coast of Korea)

  • 한수진;황용훈;손민호;최한길;장재길
    • 한국수산과학회지
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    • 제51권5호
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    • pp.571-578
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    • 2018
  • Seasonal variability in algal community structure of the subtidal zone was examined at four study sites on the southeastern coast of Korea from February to November 2016. A total of 81 species of algae (8 green, 12 brown, and 61 red) were indentified. During the study period, the greatest number of species was observed at Sinamri (57 species) followed by Daesongri (50 species), Dongbaekri (47 species) and Gangyangri (42 species). Of the six functional seaweed forms, the coarsely-branched form was the most dominant, accounting for about 43% of the total species at Daesongri. The annual average biomass in wet weight varied from $700.59g/m^2$ at Sinamri to $1,712.45g/m^2$ at Daesongri. The parameters of seaweed community structures were as follows: dominance index (DI), 0.30-0.54; richness index (R), 4.92-7.05; evenness index (J'), 0.54-0.72; and diversity index (H'), 2.05-2.91.