• 한국약용작물학회지
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• 제13권2호
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• pp.121-125
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• 2005

An analysis of RAPD-PCR (random amplified polymorphic DNA-polymerase chain reaction) was performed with three Angelica species (A. gigas Nakai, A. sinensis (Olive.) Diels and A. acutiloba Kitag) in an effort to distinguish between members of these three species. Two arbitrary primers (OPC02, OPD11) out of80 primers tested, produced 17 species-specific fragments among the three species. Eight fragments were specific for A. sinensis, four fragments specific for A. gigas, five specific for A. acutiloba. When primers OPC02 and OPD11 were used in the polymerase chain reaction, RAPD-PCR fragments that were specific for each of the three species were generated simultaneously. Primer OPC02 produced eight species-specific fragments: four were specific for A. sinensis, one for A. gigas, and three for A. acutiloba. Primer OPD11 produced nine speciesspecific fragments: four for A. sinensis, three for A. gigas, and two for A. acutiloba. The RAPD-PCR markers that were generated with these two primers should rapidly identify members of the three Angelica species. The consistency of the identifications made with these species-specific RAPD-PCR markers was demonstrated by the observation that each respective marker was generated from three accessions of each species, all with different origins. We also performed the RAPD-PCR analysis with the dried Angelica root samples that randomly collected from marketed and from the OPC02 primer, obtained a A. gigasspecific band and the band were cloned and sequenced.

• 식물분류학회지
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• 제50권1호
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• pp.8-16
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• 2020

Complete chloroplast genome sequences provide detailed information about any structural changes of the genome, instances of phylogenetic reconstruction, and molecular markers for fine-scale analyses. Recent developments of next-generation sequencing (NGS) tools have led to the rapid accumulation of genomic data, especially data pertaining to chloroplasts. Short reads deposited in public databases such as the Sequence Read Archive of the NCBI are open resources, and the corresponding chloroplast genomes are yet to be completed. The V. dilatatum complex in Korea consists of four morphologically similar species: V. dilatatum, V. erosum, V. japonicum, and V. wrightii. Previous molecular phylogenetic analyses based on several DNA regions did not resolve the relationship at the species level. In order to examine the level of variation of the chloroplast genome in the V. dilatatum complex, raw reads of V. dilatatum deposited in the NCBI database were used to reconstruct the whole chloroplast genome, with these results compared to the genomes of V. erosum, V. japonicum, and three other species in Viburnum. These comparative genomics results found no significant structural changes in Viburnum. The degree of interspecific variation among the species in the V. dilatatum complex is very low, suggesting that the species of the complex may have been differentiated recently. The species of the V. dilatatum complex share large unique deletions, providing evidence of close relationships among the species. A phylogenetic analysis of the entire genome of the Viburnum showed that V. dilatatum is a sister to one of two accessions of V. erosum, making V. erosum paraphyletic. Given that the overall degree of variation among the species in the V. dilatatum complex is low, the chloroplast genome may not provide a phylogenetic signal pertaining to relationships among the species.

• Plant Resources
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• 제7권3호
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• pp.187-194
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• 2004

Sequence-tagged site (STS) markers tightly linked to the bacterial leaf blight (BLB) resistance genes, xa5, xa13 and Xa21, were used in this study. A survey was conducted to find polymorphisms between the resistant and susceptible germplasm in rice. 500 of Korean varieties and 100 of landraces were evaluated in this study. STS marker, RG207 was used to having xa5 resistance gene of rice germplasm. 27 varieties of Korean germplasm showed resistant for xa5 gene. The RG136 an xa-13 marker resulted in a single band of approximately 1kb in all the rice accessions studied. In order to detect polymorphism, digestion of the polymerase chain reaction (PCR) product was performed using a restriction enzyme Hinf Ⅰ. The resistant lines resulted in two bands 0.5kb on digestion with Hinf Ⅰ, while the same enzyme did not digest the PCR product of susceptible lines. No polymorphism was detected in Korean varieties and landraces, indicating that they probably do not contain xa13 gene. pTA248 an Xa-21 marker detected a band of 1kb in the resistant lines and bands of either 750bp or 700bp in the susceptible lines. Among germplasm tested, there are no varieties and landraces with Xa21 resistant gene. The results of the germplasm survey will be useful for the selection of parents in breeding programs aimed at transferring these bacterial blight resistance genes from one varietal background to another.

• 한국자원식물학회지
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• 제30권3호
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• pp.298-310
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• 2017

Morphological variation between cultivated and weedy types of Perilla frutescens var. frutescens and P. frutescens var. crispa were studied in 327 germplasm by examining 17 morphological characters. The germplasm between the two varieties were varied for their qualitative and quantitative characters. The seed coat color of cultivated P. frutescens var. frutescens is commonly light brown and brown while deep brown color was observed in the weedy type P. frutescens var. frutescens and P. frutescens var. crispa. The leaf size, cluster length, plant height, flower number per cluster and seed weight in cultivated P. frutescens var. frutescens were significantly (P<0.05) different from weedy type P. frutescens var. frutescens and P. frutescens var. crispa. The cultivated P. frutescens var. frutescens exhibited significantly higher plant height (158.6 cm) compared to the weedy P. frutescens var. crispa (133.8 cm). Likewise, seed weight was significantly higher in cultivated (1.9 g) than in the weedy type of P. frutescens var. frutescens (1.6 g) and P. frutescens var. crispa (1.4 g). Principal component analysis (PCA) result showed that the first and second principal component cumulatively explained 86.6% of the total variation. The cultivated type P. frutescens var. frutescens and its weedy accessions were not clearly separated with P. frutescens var. crispa by PCA. Hence it requires the use of molecular markers for better understanding of their genetic diversity.

• 한국조경학회지
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• 제22권4호
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• pp.95-117
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• 1995

This study was carried out to investigate Korean native trees in the America landscape through arboretums, the plant inventory of America, computer files for accessions from Korea, source lists of plants and seeds, and seed and plant nursery company. The results were as follows; 1. Korean native trees introduced in America and Canada were 119 species, 116 species were being cultivated in arbrids were being sold in nurseries, new cultivars were selected from 32 species, and hybrids were bred from 5 species. 2. Abies koreana, Malus baccata, and Stewartia koreana were being cultivated in many arboretums and sold in many nurseries. Also there were new hybrids as well as new cultivars. 3. 25 species including Albizzia julibrissin were being cultivated in many arboretums and sold in many nurseries. Also there were new hybrids. 4. Ilex integra and Ilex rotunda were being cultivated in many arboretums and sold in many nurseries. There were no new cultivars, but there were new hybrids. 5. 44 species including Abies holophylla were being cultivated in many arboretums and sold in many nurseries. There were no new cultivars or hybrids. 6. Populus tremula var. davidiana was being cultivated in many arboretums. There were new cultivars of 'Erecta', 'Gigas', 'Pendula', but no new hybrids. They were not sold by any nurseries. 7. 41 species including Abies nephrolepsis were being cultivated in many arboretums. But they were not sold by any nurseries. They didn't have any new cultivars or hybrids. 8. Diospyros kaki 'Kyungsan Bansi', Elaeocarpus sylvestris var. ellipticus, and Pyrus serotina 'Dankae' were not being cultivated in arboretums in America but some nurseries were selling those species as well as new cultivars. 9. Only 3 species (Berchemia berchemiaefolia, Carpinus eximia, and Chionanthus retusus var. coreana which are native Korean plants) were not introduced in America or Canada.

• 한국작물학회:학술대회논문집
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• 한국작물학회 1998년도 21세기 한반도 농업전망과 대책(한국작물학회.한국육종학회 공동주관 심포지움 회보)
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• pp.336-352
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• 1998

The horticultural seed industry has made great progress in the last fifty years of its history after the independence of this country. The industry has accomplished self-sufficiency in major vegetable seeds and has even gained international competitive edge in certain crop seeds, particularly in hybrid cultivar development. However, the industry is facing a crisis at present coming from excessive competition among the domestic seed companies as well as the foreign currency crisis of the country. Several major seed companies have already been acquired by multinational corporations. Many people in the country as well as agriculturists are concerned about this situation. Although it is true that the industry is undergoing hard times, this crisis can be turned into a chance for making new progress depending on the joint efforts of the groups responsible, i.e., private companies, public institutions, and policy makers. Therefore, we have to turn this crisis into an opportunity for self-reform and progress. We should not be discouraged or give up. We Propose some ideas for the Progress of the seed industry. Public institutions and policy makers should do such things in cooperation as 1) training human resources for future breeders, 2) securing a wide range of genetic resources and improvement of the management system, 3) basic science research including biotechnology, 4) releasing breeding stocks from germplasm enhancement through use of exotic accessions, 5) support for breeding region- or use-specific cultivars, and 6) collection of foreign agricultural information for breeding cultivars for overseas markets. Eventually the responsible group for the final development of commercial cultivars, production, sales and management is private companies. Therefore, private companies also should have to do their best to develop competitive cultivars with a missionary spirit and endeavor for both domestic and overseas markets in cooperation with public institutions. Management based on competition, professionalism and rationalism is also urged. We are going to conclude with optimism that we can make a new vault of progress once the private and public sectors closely cooperate for the development of Korean horticultural seed industry by overcoming this crisis.

• Journal of Crop Science and Biotechnology
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• 제11권3호
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• pp.205-214
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• 2008

Blast disease caused by the fungal pathogen, Magnaporthe oryzae, is one of the most damaging diseases in rice. The use of resistant varieties is an effective measure to control the disease, however, many resistant varieties were broken down to their resistance effects by the differentiating of new virulent isolates. This study was done to analyze the haplotypes of 31 microsatellite markers linked to five major R genes and two QTLs and to identify the alleles for the putatively novel genes related to durable resistance to blast in 56 Korean japonica and four indica varieties. The 31 microsatellite markers produced 2 to 13 alleles(mean = 5.4) and had PICi values ranging from 0.065 to 0.860(mean=0.563) among the 60 rice accessions. Cluster analysis based on allele diversities of 31 microsatellite markers grouped into 60 haplotypes and ten major clusters in 0.810 genetic similarity. A subcluster IV-1 grouped of early flowering varieties harboring Piz and/or Pi9(t) on chromosome 6 and Pita/Pita-2 gene on chromosome 12. The other subcluster V-1 consisted of four stable resistance varieties Donghae, Seomjin, Palgong and Milyang20. The analysis of putative QTLs associated with seven blast resistance genes using ANOVA and linear regression showed high significance to blast resistance across regions and isolates in the markers of two genes Piz and/or Pi9(t) and Pita/Pita-2. These results illustrate the utility of microsatellite markers to identify rice varieties is likely carrying the same R genes and QTLs and rice lines with potentially novel resistant gene.

• 식물조직배양학회지
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• 제28권4호
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• pp.189-195
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• 2001

화경절 액아 유래 신초의 잎을 이용한 팔레높시스 대량번식에서 배양재료로 이용되는 신초의 발생수를 증가시키기 위해 화경배양을 위한 배지, 배양온도 화경 전처리 등 기내 배양조건과 계통 간 화경의 발육형태에 대해 조사하였다. 화경절 액아의 신초발생률은 MS배지에서 90.9%, Hyponex 배지에서 54.4%이었다. 5 mg/L의 BA가 첨가된 MS배지에서 신초가 많이 형성되었으며 발육상태도 양호하였다. 화경 액아의 위치별 발육형태는 기저부 쪽일수록 신초발생이, 상부 쪽일수록 2차화경이 많이 발생되었으며 25~28$^{\circ}C$의 배양온도는 액아로부터 신초를 얻는 데 적절하였으며, 황화처리는 오염률을 낮추는 데 효과가 있었으나 페놀물질 유출량의 감소효과는 없었다. 수집한 30계통 중 27계통의 화경에서 신초를 얻었으며 화경편 당 평균 신초수는 3.17개이었으나 Phal. 3020, 3039 등은 신초가 많이 발생되어 다른 계통과 차이가 있었다. 교잡 F$_1$계통의 화경발육 양상은 모본(수집계통)과 비슷하였다.

• 생명과학회지
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• 제22권3호
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• pp.285-292
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• 2012

조팝나무속(genus Spiraea) 식물은 다년생 목본으로 주로 아시아와 유럽에 분포하고 있다. 한국의 14종을 포함한 전 세계 38분류군에 대해 핵 내 리보솜 전사 서열(ITS)로 이 속의 유전적 관계를 평가하였다. 이 분자생물학적 자료로 분류군의 분지군은 잘 분리되었다. 47 계통(38 분류군: 14개 한국 분류군, 33개 세계 분류군, 9개 중복 분류군). 전체 689 bp 중에서452자리는 절약-정보적이었고, 527자리는 변이를 나타내었으나 절약-비정보적이었고, 159자리는 분류군 전체에서 변이가 전혀 없었다. 비록 계통도에서 잘 분리되었지만 형태적 특성과 지리적 분포와는 일치하지 않았다. 분리되는 자리수는 430이었으며 핵산 다양도(${\pi}$)는 0.281이였다. 중립가설 하에서 Tajima 검증 통계값(D) 은 0.5보다 큰 2.325였다. 따라서 자연 도태가 유전적 변이를 증가시키는 방향으로 작용하고 있었다.

• 원예과학기술지
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• 제19권1호
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• pp.7-11
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• 2001

1998-1999년도에 걸쳐 총 238점의 고추 유전자원에 대하여 흰가루병에 대한 저항성을 검정한 결과, Capsicum baccatum에 속하는 KC604, 605, 606, 608, C. chinense에 속하는 KC616, C. pubescens에 속하는 KC638, 640, 641, 642, 643, 644가 발병하지 않을 정도로 고도의 저항성을 나타내었으며 C. annuum에 속하는 KC47-1(PI244670), KC319-1, KC545, KC320는 경미하게 발병하여 다소 저항성으로 나타났다. KC47-1, KC319-1, KC320은 Stemphylium spp.에 의한 고추 잎점무늬병에 저항성이며, 그 중 KC 47-1은 더뎅이병(Xanthomonas campestris pv. vesicatoria)에도 저항성이어서 이들 병에 복합저항성 육성도 가능할 것으로 기대된다.