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Optimization of Multi-Atlas Segmentation with Joint Label Fusion Algorithm for Automatic Segmentation in Prostate MR Imaging

  • Choi, Yoon Ho;Kim, Jae-Hun;Kim, Chan Kyo
    • Investigative Magnetic Resonance Imaging
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    • v.24 no.3
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    • pp.123-131
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    • 2020
  • Purpose: Joint label fusion (JLF) is a popular multi-atlas-based segmentation algorithm, which compensates for dependent errors that may exist between atlases. However, in order to get good segmentation results, it is very important to set the several free parameters of the algorithm to optimal values. In this study, we first investigate the feasibility of a JLF algorithm for prostate segmentation in MR images, and then suggest the optimal set of parameters for the automatic prostate segmentation by validating the results of each parameter combination. Materials and Methods: We acquired T2-weighted prostate MR images from 20 normal heathy volunteers and did a series of cross validations for every set of parameters of JLF. In each case, the atlases were rigidly registered for the target image. Then, we calculated their voting weights for label fusion from each combination of JLF's parameters (rpxy, rpz, rsxy, rsz, β). We evaluated the segmentation performances by five validation metrics of the Prostate MR Image Segmentation challenge. Results: As the number of voxels participating in the voting weight calculation and the number of referenced atlases is increased, the overall segmentation performance is gradually improved. The JLF algorithm showed the best results for dice similarity coefficient, 0.8495 ± 0.0392; relative volume difference, 15.2353 ± 17.2350; absolute relative volume difference, 18.8710 ± 13.1546; 95% Hausdorff distance, 7.2366 ± 1.8502; and average boundary distance, 2.2107 ± 0.4972; in parameters of rpxy = 10, rpz = 1, rsxy = 3, rsz = 1, and β = 3. Conclusion: The evaluated results showed the feasibility of the JLF algorithm for automatic segmentation of prostate MRI. This empirical analysis of segmentation results by label fusion allows for the appropriate setting of parameters.

A Dominant Feature based Nomalization and Relational Description of Shape Signature for Scale/Rotational Robustness (2차원 형상 변화에 강건한 지배적 특징 기반 형상 시그너쳐의 정규화 및 관계 특징 기술)

  • Song, Ho-Geun;Koo, Ha-Sung
    • Journal of the Korea Society of Computer and Information
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    • v.16 no.11
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    • pp.103-111
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    • 2011
  • In this paper, we propose a Geometrical Centroid Contour Distance(GCCD) which is described by shape signature based on contour sequence. The proposed method uses geomertrical relation features instead of the absolute angle based features after it was normalized and aligned with dominant feature of the shape. Experimental result with MPEG-7 CE-Shape-1 Data Set reveals that our method has low time/spatial complexity and scale/rotation robustness than the other methods, showing that the precision of our method is more accurate than the conventional desctiptors. However, performance of the GCCD is limited with concave and complex shaped objects.

Performance Improvement Algorithm for Wireless Localization Based on RSSI at Indoor Environment (RSSI의 거리 추정 방식에 바탕을 둔 실내 무선 측위 성능 향상 알고리즘)

  • Park, Joo-Hyun;Lee, Jung-Kyu;Kim, Seong-Cheol
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.36 no.4C
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    • pp.254-264
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    • 2011
  • In this paper, we propose two algorithm for improving the performance of wireless localization(Trilateration and Least Square) based on the range based approach method in indoor environment using RSSI for ranging distance. we propose a method to discriminate the case that has relatively large estimation errors in trilateration using Heron''s formula for the volume of a tetrahedron. And we propose the algorithm to process the discriminated types of distance using the absolute value calculated by Heron''s formula. In addition, we propose another algorithm for the case of which the number of anchor nodes larger than three. In this case, Residual Weighting Factor(RWGH) improves the performance of Least Square. However, RWGH requires many number of calculations. In this paper, we propose Iterative Weighted Centroid Algorithm(IWCA) that has better performance and less calculation than RWGH. We show the improvement of performance for two algorithms and the combination of these algorithm by using simulation results.

Verification of Extended Source-To-Imager Distance (SID) Correction for Portal Dosimetry

  • Son, Jaeman;Kim, Jung-in;Park, Jong Min;Choi, Chang Heon
    • Progress in Medical Physics
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    • v.29 no.4
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    • pp.137-142
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    • 2018
  • This study aimed to evaluate and verify a process for correcting the extended source-to-imager distance (SID) in portal dosimetry (PD). In this study, eight treatment plans (four volumetric modulated arc therapy and four intensity-modulated radiation therapy plans) at different treatment sites and beam energies were selected for measurement. A Varian PD system with portal dose image prediction (PDIP) was used for the measurement and verification. To verify the integrity of the plan, independent measurements were performed with the MapCHECK device. The predicted and measured fluence were evaluated using the gamma passing rate. The output ratio was defined as the ratio of the absolute dose of the reference SID (100 cm) to that of each SID (120 cm or 140 cm). The measured fluence for each SID was absolutely and relatively compared. The average SID output ratios were 0.687 and 0.518 for 120 SID and 140 SID, respectively; the ratio showed less than 1% agreement with the calculation obtained by using the inverse square law. The resolution of the acquired EPIDs were 0.336, 0.280, and 0.240 for 100, 120, and 140 SID, respectively. The gamma passing rates with PD and MapCHECK exceeded 98% for all treatment plans and SIDs. When autoalignment was performed in PD, the X-offset showed no change, and the Y-offset decreased with increasing SID. The PD-generated PDIP can be used for extended SID without additional correction.

User Evaluation of Encountered Type Haptic System with Visual-Haptic Co-location (시각 - 촉각 일치된 마중형 햅틱 제시 시스템의 사용자 평가)

  • Cha, Baekdong;Bae, Yoosung;Choi, Wonil;Ryu, Jeha
    • Journal of the HCI Society of Korea
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    • v.14 no.2
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    • pp.13-20
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    • 2019
  • For encountered haptic display systems among the virtual training systems for industrial safety, visual-haptic co-location is required for natural interaction between virtual and real objects. In this paper, we performed the user evaluation of the immersive VR haptic system which implement some level of visual-haptic co-location through a careful and accurate calibration method. The goal of the evaluation is to show that user performance (reaction time and distance accuracy) for both environments is not significantly different for certain tasks performed. The user evaluation results show statistically significant differences in reaction time but the absolute difference is less than 1 second. In the meantime, the distance accuracy shows no difference between the virtual and the actual environments. Therefore, it can be concluded that the developed haptic virtual training system can provide inexpensive industrial safety training in place of costly actual environment.

Estimating Location in Real-world of a Observer for Adaptive Parallax Barrier (적응적 패럴랙스 베리어를 위한 사용자 위치 추적 방법)

  • Kang, Seok-Hoon
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.23 no.12
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    • pp.1492-1499
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    • 2019
  • This paper propose how to track the position of the observer to control the viewing zone using an adaptive parallax barrier. The pose is estimated using a Constrained Local Model based on the shape model and Landmark for robust eye-distance measurement in the face pose. Camera's correlation converts distance and horizontal location to centimeter. The pixel pitch of the adaptive parallax barrier is adjusted according to the position of the observer's eyes, and the barrier is moved to adjust the viewing area. This paper propose a method for tracking the observer in the range of 60cm to 490cm, and measure the error, measurable range, and fps according to the resolution of the camera image. As a result, the observer can be measured within the absolute error range of 3.1642cm on average, and it was able to measure about 278cm at 320×240, about 488cm at 640×480, and about 493cm at 1280×960 depending on the resolution of the image.

Full-arch accuracy of five intraoral scanners: In vivo analysis of trueness and precision

  • Kwon, Miran;Cho, Youngmok;Kim, Dong-Wook;Kim, MyungSu;Kim, Yoon-Ji;Chang, Minho
    • The korean journal of orthodontics
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    • v.51 no.2
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    • pp.95-104
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    • 2021
  • Objective: To evaluate the trueness and precision of full-arch scans acquired using five intraoral scanners and investigate the factors associated with the dimensional accuracy of the intraoral scan data. Methods: Nine adult participants (mean age, 34.3 ± 8.3 years) were recruited. Four zirconium spheres (Ø 6 mm) were bonded to the canines and the molars. Following acquisition of reference scans using an industrial-grade scanner, five intraoral scanners, namely i500, CS3600, Trios 3, iTero, and CEREC Omnicam, were used to scan the arches. Linear distances between the four reference spheres were automatically calculated, and linear mixed model analysis was performed to compare the trueness and precision of the intraoral scan data among the different scanners. Results: The absolute mean trueness and precision values for all intraoral scanners were 76.6 ± 79.3 and 56.6 ± 52.4 ㎛, respectively. The type of scanner and the measured linear distances had significant effects on the accuracy of the intraoral scan data. With regard to trueness, errors in the intermolar dimension and the distance from the canine to the contralateral molar were greater with Omnicam than with the other scanners. With regard to precision, the error in the linear distance from the canine to the molar in the same quadrant was greater with Omnicam and CS3600 than with the other scanners. Conclusions: The dimensional accuracy of intraoral scan data may differ significantly according to the type of scanner, with the amount of error in terms of trueness being clinically significant.

Applicability Analysis of Measurement Data Classification and Spatial Interpolation to Improve IUGIM Accuracy (지하공간통합지도의 정확도 향상을 위한 계측 데이터 분류 및 공간 보간 기법 적용성 분석)

  • Lee, Sang-Yun;Song, Ki-Il;Kang, Kyung-Nam;Kim, Wooram;An, Joon-Sang
    • Journal of the Korean Geotechnical Society
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    • v.38 no.10
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    • pp.17-29
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    • 2022
  • Recently, the interest in integrated underground geospatial information mapping (IUGIM) to ensure the safety of underground spaces and facilities has been increasing. Because IUGIM is used in the fields of underground space development and underground safety management, the up-to-dateness and accuracy of information are critical. In this study, IUGIM and field data were classified, and the accuracy of IUGIM was improved by spatial interpolation. A spatial interpolation technique was used to process borehole data in IUGIM, and a quantitative evaluation was performed with mean absolute error and root mean square error through the cross-validation of seven interpolation results according to the technique and model. From the cross-validation results, accuracy decreased in the order of nonuniform rational B-spline, Kriging, and inverse distance weighting. In the case of Kriging, the accuracy difference according to the variogram model was insignificant, and Kriging using the spherical variogram exhibited the best accuracy.

Immediate Effect of Neuromuscular Electrical Stimulation on Balance and Proprioception During One-leg Standing

  • Je, Jeongwoo;Choi, Woochol Joseph
    • Physical Therapy Korea
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    • v.29 no.3
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    • pp.187-193
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    • 2022
  • Background: Neuromuscular electrical stimulation (NMES) is a physical modality used to activate skeletal muscles for strengthening. While voluntary muscle contraction (VMC) follows the progressive recruitment of motor units in order of size from small to large, NMES-induced muscle contraction occurs in a nonselective and synchronous pattern. Therefore, the outcome of muscle strengthening training using NMES-induced versus voluntary contraction might be different, which might affect balance performance. Objects: We examined how the NMES training affected balance and proprioception. Methods: Forty-four young adults were randomly assigned to NMES and VMC group. All participants performed one-leg standing on a force plate and sat on the Biodex (Biodex R Corp.) to measure balance and ankle proprioception, respectively. All measures were conducted before and after a training session. In NMES group, electric pads were placed on the tibialis anterior, gastrocnemius, and soleus muscles for 20 minutes. In VMC group, co-contraction of the three muscles was conducted. Outcome variables included mean distance, root mean square distance, total excursion, mean velocity, 95% confidence circle area acquired from the center of pressure data, and absolute error of dorsi/plantarflexion. Results: None of outcome variables were associated with group (p > 0.35). However, all but plantarflexion error was associated with time (p < 0.02), and the area and mean velocity were 37.0% and 18.6% lower in post than pre in NMES group, respectively, and 48.9% and 16.7% lower in post than pre in VMC group, respectively. Conclusion: Despite different physiology underlying the NMES-induced versus VMC, both training methods improved balance and ankle joint proprioception.

Optimized inverse distance weighted interpolation algorithm for γ radiation field reconstruction

  • Biao Zhang;Jinjia Cao;Shuang Lin;Xiaomeng Li;Yulong Zhang;Xiaochang Zheng;Wei Chen;Yingming Song
    • Nuclear Engineering and Technology
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    • v.56 no.1
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    • pp.160-166
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    • 2024
  • The inversion of radiation field distribution is of great significance in the decommissioning sites of nuclear facilities. However, the radiation fields often contain multiple mixtures of radionuclides, making the inversion extremely difficult and posing a huge challenge. Many radiation field reconstruction methods, such as Kriging algorithm and neural network, can not solve this problem perfectly. To address this issue, this paper proposes an optimized inverse distance weighted (IDW) interpolation algorithm for reconstructing the gamma radiation field. The algorithm corrects the difference between the experimental and simulated scenarios, and the data is preprocessed with normalization to improve accuracy. The experiment involves setting up gamma radiation fields of three Co-60 radioactive sources and verifying them by using the optimized IDW algorithm. The results show that the mean absolute percentage error (MAPE) of the reconstruction result obtained by using the optimized IDW algorithm is 16.0%, which is significantly better than the results obtained by using the Kriging method. Importantly, the optimized IDW algorithm is suitable for radiation scenarios with multiple radioactive sources, providing an effective method for obtaining radiation field distribution in nuclear facility decommissioning engineering.